RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 HTN3P15516 51 aa7.58□□□□□ -1.2
TPM1-227ENST00000560970 TSPOP30536 169 aa7.58□□□□□ -1.2
TPM1-227ENST00000560970 LEPP41159 167 aa7.58□□□□□ -1.2
TPM1-227ENST00000560970 GNG5P63218 68 aa7.58□□□□□ -1.2
TPM1-227ENST00000560970 RHEBQ15382 184 aa7.58□□□□□ -1.2
TPM1-227ENST00000560970 FAM74A3Q4VXF1 159 aa7.58□□□□□ -1.2
TPM1-227ENST00000560970 Q6ZQT7 251 aa7.58□□□□□ -1.2
TPM1-227ENST00000560970 ZFAND2AQ8N6M9 145 aa7.58□□□□□ -1.2
TPM1-227ENST00000560970 LINC00477Q96M19 166 aa7.58□□□□□ -1.2
TPM1-227ENST00000560970 TRAV12-3A0A0B4J271 114 aa7.57□□□□□ -1.2
TPM1-227ENST00000560970 GGTLC3B5MD39 225 aa7.57□□□□□ -1.2
TPM1-227ENST00000560970 CRISP2P16562 243 aa7.57□□□□□ -1.2
TPM1-227ENST00000560970 PNRC1Q12796 327 aaPredicted RBP7.57□□□□□ -1.2
TPM1-227ENST00000560970 TMEM78Q5T7P6 136 aa7.57□□□□□ -1.2
TPM1-227ENST00000560970 C1orf134Q5TEV5 83 aa7.57□□□□□ -1.2
TPM1-227ENST00000560970 TMEM88Q6PEY1 159 aa7.57□□□□□ -1.2
TPM1-227ENST00000560970 ATRAIDQ6UW56 229 aa7.57□□□□□ -1.2
TPM1-227ENST00000560970 TMEM256Q8N2U0 113 aa7.57□□□□□ -1.2
TPM1-227ENST00000560970 C15orf53Q8NAA6 179 aa7.57□□□□□ -1.2
TPM1-227ENST00000560970 LINC01587Q99440 93 aa7.57□□□□□ -1.2
TPM1-227ENST00000560970 ZNF492Q9P255 531 aa7.57□□□□□ -1.2
TPM1-227ENST00000560970 TRAV8-1A0A0A6YYK1 113 aa7.56□□□□□ -1.2
TPM1-227ENST00000560970 TMEM238LA0A1B0GVL6 79 aa7.56□□□□□ -1.2
TPM1-227ENST00000560970 C7orf71A4D174 169 aa7.56□□□□□ -1.2
TPM1-227ENST00000560970 RBAKDNA6NC62 111 aa7.56□□□□□ -1.2
TPM1-227ENST00000560970 H7BYZ3 331 aa7.56□□□□□ -1.2
TPM1-227ENST00000560970 SLC25A5P05141 298 aaKnown RBP7.56□□□□□ -1.2
TPM1-227ENST00000560970 HTN1P15515 57 aa7.56□□□□□ -1.2
TPM1-227ENST00000560970 CSN1S1P47710 185 aa7.56□□□□□ -1.2
TPM1-227ENST00000560970 ZNF138P52744 262 aa7.56□□□□□ -1.2
TPM1-227ENST00000560970 FAM3BP58499 235 aaPredicted RBP7.56□□□□□ -1.2
TPM1-227ENST00000560970 TAS2R60P59551 318 aa7.56□□□□□ -1.2
TPM1-227ENST00000560970 DAD1P61803 113 aa7.56□□□□□ -1.2
TPM1-227ENST00000560970 GOLT1AQ6ZVE7 132 aa7.56□□□□□ -1.2
TPM1-227ENST00000560970 RNASE8Q8TDE3 154 aaKnown RBP7.56□□□□□ -1.2
TPM1-227ENST00000560970 TVP23CQ96ET8 276 aa7.56□□□□□ -1.2
TPM1-227ENST00000560970 C20orf144Q9BQM9 153 aa7.56□□□□□ -1.2
TPM1-227ENST00000560970 A0A1W2PRE2 83 aa7.55□□□□□ -1.2
TPM1-227ENST00000560970 FAM74A7A6NL05 159 aa7.55□□□□□ -1.2
TPM1-227ENST00000560970 ZNF727A8MUV8 499 aa7.55□□□□□ -1.2
TPM1-227ENST00000560970 B4DEV8 164 aa7.55□□□□□ -1.2
TPM1-227ENST00000560970 M0R036 132 aa7.55□□□□□ -1.2
TPM1-227ENST00000560970 ZNF324O75467 553 aaPredicted RBP7.55□□□□□ -1.2
TPM1-227ENST00000560970 CEBPGP53567 150 aa7.55□□□□□ -1.2
TPM1-227ENST00000560970 CST9LP1Q5W188 147 aa7.55□□□□□ -1.2
TPM1-227ENST00000560970 CMTM2Q8TAZ6 248 aa7.55□□□□□ -1.2
TPM1-227ENST00000560970 C11orf52Q96A22 123 aa7.55□□□□□ -1.2
TPM1-227ENST00000560970 SMIM7Q9BQ49 75 aa7.55□□□□□ -1.2
TPM1-227ENST00000560970 TCEAL7Q9BRU2 100 aa7.55□□□□□ -1.2
TPM1-227ENST00000560970 NAT8Q9UHE5 227 aa7.55□□□□□ -1.2
TPM1-227ENST00000560970 A0A087WWC5 75 aa7.54□□□□□ -1.2
TPM1-227ENST00000560970 C7orf77A4D0Y5 90 aa7.54□□□□□ -1.2
TPM1-227ENST00000560970 RNASE4P34096 147 aaKnown RBP7.54□□□□□ -1.2
TPM1-227ENST00000560970 ATP5G3P48201 142 aa7.54□□□□□ -1.2
TPM1-227ENST00000560970 UBE2G2P60604 165 aa7.54□□□□□ -1.2
TPM1-227ENST00000560970 LINC00528Q8N1L1 170 aa7.54□□□□□ -1.2
TPM1-227ENST00000560970 C5orf17Q8NAS9 161 aa7.54□□□□□ -1.2
TPM1-227ENST00000560970 TMEM263Q8WUH6 116 aaKnown RBP7.54□□□□□ -1.2
TPM1-227ENST00000560970 ANAPC16Q96DE5 110 aa7.54□□□□□ -1.2
TPM1-227ENST00000560970 C16orf74Q96GX8 76 aa7.54□□□□□ -1.2
TPM1-227ENST00000560970 SGK494Q96LW2 274 aa7.54□□□□□ -1.2
TPM1-227ENST00000560970 ATG101Q9BSB4 218 aa7.54□□□□□ -1.2
TPM1-227ENST00000560970 PARLQ9H300 379 aa7.54□□□□□ -1.2
TPM1-227ENST00000560970 SMCO4Q9NRQ5 59 aa7.54□□□□□ -1.2
TPM1-227ENST00000560970 LRP1BQ9NZR2 4599 aa7.54□□□□□ -1.2
TPM1-227ENST00000560970 TRBV7-9A0A0J9YWB2 115 aa7.53□□□□□ -1.2
TPM1-227ENST00000560970 LYRM9A8MSI8 78 aa7.53□□□□□ -1.2
TPM1-227ENST00000560970 C16orf90A8MZG2 172 aa7.53□□□□□ -1.2
TPM1-227ENST00000560970 J3QL48 77 aa7.53□□□□□ -1.2
TPM1-227ENST00000560970 TCRAP04437 139 aa7.53□□□□□ -1.2
TPM1-227ENST00000560970 GPX1P07203 203 aa7.53□□□□□ -1.2
TPM1-227ENST00000560970 SUMO1P63165 101 aaKnown RBP7.53□□□□□ -1.2
TPM1-227ENST00000560970 TMEM241Q24JQ0 296 aa7.53□□□□□ -1.2
TPM1-227ENST00000560970 ARL6IP6Q8N6S5 226 aa7.53□□□□□ -1.2
TPM1-227ENST00000560970 PYGO2Q9BRQ0 406 aa7.53□□□□□ -1.2
TPM1-227ENST00000560970 KRTAP4-5Q9BYR2 181 aa7.53□□□□□ -1.2
TPM1-227ENST00000560970 TP53TG3Q9ULZ0 132 aa7.53□□□□□ -1.2
TPM1-227ENST00000560970 APOBP04114 4563 aaKnown RBP7.52□□□□□ -1.2
TPM1-227ENST00000560970 CDK2AP2O75956 126 aa7.52□□□□□ -1.21
TPM1-227ENST00000560970 IGLV2-11P01706 119 aa7.52□□□□□ -1.21
TPM1-227ENST00000560970 Q6AWC8 147 aa7.52□□□□□ -1.21
TPM1-227ENST00000560970 C11orf72Q8NBR9 251 aa7.52□□□□□ -1.21
TPM1-227ENST00000560970 LINC00467Q9BRT7 94 aa7.52□□□□□ -1.21
TPM1-227ENST00000560970 SDF2L1Q9HCN8 221 aa7.52□□□□□ -1.21
TPM1-227ENST00000560970 NOP10Q9NPE3 64 aaKnown RBP7.52□□□□□ -1.21
TPM1-227ENST00000560970 RPS10P5Q9NQ39 176 aa7.52□□□□□ -1.21
TPM1-227ENST00000560970 EPDR1Q9UM22 224 aa7.52□□□□□ -1.21
TPM1-227ENST00000560970 LENEPQ9Y5L5 61 aa7.52□□□□□ -1.21
TPM1-227ENST00000560970 NBDYA0A0U1RRE5 68 aa7.51□□□□□ -1.21
TPM1-227ENST00000560970 SCO2A0A1W2PP80 73 aa7.51□□□□□ -1.21
TPM1-227ENST00000560970 C9JCJ5 164 aa7.51□□□□□ -1.21
TPM1-227ENST00000560970 TNP2Q05952 138 aa7.51□□□□□ -1.21
TPM1-227ENST00000560970 ZNF674Q2M3X9 581 aa7.51□□□□□ -1.21
TPM1-227ENST00000560970 ZNF493Q6ZR52 646 aa7.51□□□□□ -1.21
TPM1-227ENST00000560970 CBLN2Q8IUK8 224 aa7.51□□□□□ -1.21
TPM1-227ENST00000560970 C6orf223Q8N319 242 aa7.51□□□□□ -1.21
TPM1-227ENST00000560970 C15orf54Q8N8G6 183 aa7.51□□□□□ -1.21
TPM1-227ENST00000560970 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.51□□□□□ -1.21
TPM1-227ENST00000560970 C8orf49Q96NF6 230 aa7.51□□□□□ -1.21
TPM1-227ENST00000560970 TIMM8BQ9Y5J9 83 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms