RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 GNRH2O43555 120 aa12.18□□□□□ -0.46
TPM1-226ENST00000560959 MIR17HGQ75NE6 70 aa12.18□□□□□ -0.46
TPM1-226ENST00000560959 STX12Q86Y82 276 aa12.18□□□□□ -0.46
TPM1-226ENST00000560959 Q8N976 141 aa12.18□□□□□ -0.46
TPM1-226ENST00000560959 CENPXA8MT69 81 aa12.17□□□□□ -0.46
TPM1-226ENST00000560959 IGLV2-8P01709 118 aa12.17□□□□□ -0.46
TPM1-226ENST00000560959 ATP6V0E2Q8NHE4 81 aa12.17□□□□□ -0.46
TPM1-226ENST00000560959 CIRBP-AS1Q8TBR5 109 aa12.17□□□□□ -0.46
TPM1-226ENST00000560959 PHYHIPLQ96FC7 376 aa12.17□□□□□ -0.46
TPM1-226ENST00000560959 ATP5SQ99766 215 aa12.17□□□□□ -0.46
TPM1-226ENST00000560959 PKHD1L1Q86WI1 4243 aa12.17□□□□□ -0.46
TPM1-226ENST00000560959 TRAV21A0A0B4J279 112 aa12.16□□□□□ -0.46
TPM1-226ENST00000560959 RBFOX3A6NFN3 312 aa12.16□□□□□ -0.46
TPM1-226ENST00000560959 CCSO14618 274 aa12.16□□□□□ -0.46
TPM1-226ENST00000560959 RS1O15537 224 aa12.16□□□□□ -0.46
TPM1-226ENST00000560959 OR10J4P0C629 311 aa12.16□□□□□ -0.46
TPM1-226ENST00000560959 BTCP35070 178 aa12.16□□□□□ -0.46
TPM1-226ENST00000560959 RANP62826 216 aaKnown RBP12.16□□□□□ -0.46
TPM1-226ENST00000560959 TRIQKQ629K1 86 aa12.16□□□□□ -0.46
TPM1-226ENST00000560959 KCNS1Q96KK3 526 aa12.16□□□□□ -0.46
TPM1-226ENST00000560959 NAGKQ9UJ70 344 aa12.16□□□□□ -0.46
TPM1-226ENST00000560959 IGSF23A1L1A6 192 aa12.15□□□□□ -0.46
TPM1-226ENST00000560959 RNF222A6NCQ9 220 aa12.15□□□□□ -0.46
TPM1-226ENST00000560959 DIRC3C9JPN6 131 aa12.15□□□□□ -0.46
TPM1-226ENST00000560959 LECT2O14960 151 aa12.15□□□□□ -0.46
TPM1-226ENST00000560959 SPANXN2Q5MJ10 180 aa12.15□□□□□ -0.46
TPM1-226ENST00000560959 C2orf50Q96LR7 162 aa12.15□□□□□ -0.46
TPM1-226ENST00000560959 C5orf51A6NDU8 294 aa12.14□□□□□ -0.47
TPM1-226ENST00000560959 FAM25EA8MYX2 175 aa12.14□□□□□ -0.47
TPM1-226ENST00000560959 TYMSP04818 313 aa12.14□□□□□ -0.47
TPM1-226ENST00000560959 IL15RAQ13261 267 aa12.14□□□□□ -0.47
TPM1-226ENST00000560959 LINC01620Q4KN68 170 aa12.14□□□□□ -0.47
TPM1-226ENST00000560959 CFAP126Q5VTH2 177 aa12.14□□□□□ -0.47
TPM1-226ENST00000560959 BAALCQ8WXS3 180 aa12.14□□□□□ -0.47
TPM1-226ENST00000560959 SDF2L1Q9HCN8 221 aa12.14□□□□□ -0.47
TPM1-226ENST00000560959 GGTLC3B5MD39 225 aa12.13□□□□□ -0.47
TPM1-226ENST00000560959 MGST1P10620 155 aaKnown RBP12.13□□□□□ -0.47
TPM1-226ENST00000560959 ZNF876PQ49A33 203 aa12.13□□□□□ -0.47
TPM1-226ENST00000560959 RMI2Q96E14 147 aa12.13□□□□□ -0.47
TPM1-226ENST00000560959 IGLV2-11P01706 119 aa12.12□□□□□ -0.47
TPM1-226ENST00000560959 ARL6IP6Q8N6S5 226 aa12.12□□□□□ -0.47
TPM1-226ENST00000560959 PTH2Q96A98 100 aa12.12□□□□□ -0.47
TPM1-226ENST00000560959 KCNIP2Q9NS61 270 aa12.12□□□□□ -0.47
TPM1-226ENST00000560959 OR7C2O60412 319 aa12.11□□□□□ -0.47
TPM1-226ENST00000560959 DAZ4Q86SG3 579 aaKnown RBP12.11□□□□□ -0.47
TPM1-226ENST00000560959 DAZ3Q9NR90 486 aaKnown RBP12.11□□□□□ -0.47
TPM1-226ENST00000560959 SEC11BP0C7V7 166 aa12.1□□□□□ -0.47
TPM1-226ENST00000560959 S100A10P60903 97 aa12.1□□□□□ -0.47
TPM1-226ENST00000560959 RAB32Q13637 225 aa12.1□□□□□ -0.47
TPM1-226ENST00000560959 DPPA3Q6W0C5 159 aa12.1□□□□□ -0.47
TPM1-226ENST00000560959 Q8N3U1 123 aa12.1□□□□□ -0.47
TPM1-226ENST00000560959 ASB13Q8WXK3 278 aa12.1□□□□□ -0.47
TPM1-226ENST00000560959 A0A087WWC5 75 aa12.09□□□□□ -0.47
TPM1-226ENST00000560959 TRAV8-1A0A0A6YYK1 113 aa12.09□□□□□ -0.47
TPM1-226ENST00000560959 THAP6Q8TBB0 222 aa12.09□□□□□ -0.47
TPM1-226ENST00000560959 RPL37AP61513 92 aaKnown RBP12.08□□□□□ -0.48
TPM1-226ENST00000560959 UBE2L3P68036 154 aaKnown RBP12.08□□□□□ -0.48
TPM1-226ENST00000560959 TREM1Q9NP99 234 aa12.08□□□□□ -0.48
TPM1-226ENST00000560959 OTORQ9NRC9 128 aa12.08□□□□□ -0.48
TPM1-226ENST00000560959 IGHV3-73A0A0B4J1V6 119 aa12.07□□□□□ -0.48
TPM1-226ENST00000560959 LINC00694P0DN24 101 aa12.07□□□□□ -0.48
TPM1-226ENST00000560959 NHLH2Q02577 135 aa12.07□□□□□ -0.48
TPM1-226ENST00000560959 FAM74A1Q5RGS3 127 aa12.07□□□□□ -0.48
TPM1-226ENST00000560959 OR5C1Q8NGR4 320 aa12.07□□□□□ -0.48
TPM1-226ENST00000560959 CMTM2Q8TAZ6 248 aa12.07□□□□□ -0.48
TPM1-226ENST00000560959 TVP23CQ96ET8 276 aa12.07□□□□□ -0.48
TPM1-226ENST00000560959 SDHCQ99643 169 aaPredicted RBP12.07□□□□□ -0.48
TPM1-226ENST00000560959 WDR61Q9GZS3 305 aaKnown RBP12.07□□□□□ -0.48
TPM1-226ENST00000560959 PGPA6NDG6 321 aa12.06□□□□□ -0.48
TPM1-226ENST00000560959 C17orf112F2Z3M2 114 aa12.06□□□□□ -0.48
TPM1-226ENST00000560959 ZFP2Q6ZN57 461 aa12.06□□□□□ -0.48
TPM1-226ENST00000560959 HYLS1Q96M11 299 aa12.06□□□□□ -0.48
TPM1-226ENST00000560959 C9orf85Q96MD7 179 aa12.06□□□□□ -0.48
TPM1-226ENST00000560959 RNF213Q63HN8 5207 aa12.06□□□□□ -0.48
TPM1-226ENST00000560959 TAS2R45P59539 299 aa12.05□□□□□ -0.48
TPM1-226ENST00000560959 KHDC3LQ587J8 217 aa12.05□□□□□ -0.48
TPM1-226ENST00000560959 CYB561D1Q8N8Q1 229 aa12.05□□□□□ -0.48
TPM1-226ENST00000560959 OR10G9Q8NGN4 311 aa12.05□□□□□ -0.48
TPM1-226ENST00000560959 DAZAP1Q96EP5 407 aaKnown RBP12.05□□□□□ -0.48
TPM1-226ENST00000560959 NMES1Q9C002 83 aa12.05□□□□□ -0.48
TPM1-226ENST00000560959 IGKV2D-24A0A075B6R9 120 aa12.04□□□□□ -0.48
TPM1-226ENST00000560959 PGPEP1LA6NFU8 196 aa12.04□□□□□ -0.48
TPM1-226ENST00000560959 F6UZH7 168 aa12.04□□□□□ -0.48
TPM1-226ENST00000560959 TCRBP04435 133 aa12.04□□□□□ -0.48
TPM1-226ENST00000560959 MT1HL1P0DM35 61 aa12.04□□□□□ -0.48
TPM1-226ENST00000560959 FGF8P55075 233 aaPredicted RBP12.04□□□□□ -0.48
TPM1-226ENST00000560959 C14orf177Q52M58 125 aa12.04□□□□□ -0.48
TPM1-226ENST00000560959 ZNF506Q5JVG8 444 aa12.04□□□□□ -0.48
TPM1-226ENST00000560959 PIK3CD-AS1Q5SR53 167 aa12.04□□□□□ -0.48
TPM1-226ENST00000560959 SEC22CQ9BRL7 303 aa12.04□□□□□ -0.48
TPM1-226ENST00000560959 URGCP-MRPS24S4R325 110 aa12.04□□□□□ -0.48
TPM1-226ENST00000560959 TAAR5O14804 337 aa12.03□□□□□ -0.48
TPM1-226ENST00000560959 IL7P13232 177 aa12.03□□□□□ -0.48
TPM1-226ENST00000560959 HNRNPA3P51991 378 aaKnown RBP12.03□□□□□ -0.48
TPM1-226ENST00000560959 ATRAIDQ6UW56 229 aa12.03□□□□□ -0.48
TPM1-226ENST00000560959 GOLT1AQ6ZVE7 132 aa12.03□□□□□ -0.48
TPM1-226ENST00000560959 MBD2Q9UBB5 411 aa12.03□□□□□ -0.48
TPM1-226ENST00000560959 GAGE12JA6NER3 117 aa12.02□□□□□ -0.49
TPM1-226ENST00000560959 PLA2G10O15496 165 aa12.02□□□□□ -0.49
TPM1-226ENST00000560959 GAGE1Q13065 139 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms