RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 MIC13Q5XKP0 118 aa6.3□□□□□ -1.4
HERC1-210ENST00000560897 KCNRGQ8N5I3 272 aa6.3□□□□□ -1.4
HERC1-210ENST00000560897 OR2G3Q8NGZ4 309 aa6.3□□□□□ -1.4
HERC1-210ENST00000560897 GPR82Q96P67 336 aa6.3□□□□□ -1.4
HERC1-210ENST00000560897 NPCDR1Q9BY65 106 aa6.3□□□□□ -1.4
HERC1-210ENST00000560897 SLC39A9Q9NUM3 307 aa6.3□□□□□ -1.4
HERC1-210ENST00000560897 PXMP4Q9Y6I8 212 aa6.3□□□□□ -1.4
HERC1-210ENST00000560897 IGHV3-38A0A0C4DH36 116 aa6.29□□□□□ -1.4
HERC1-210ENST00000560897 IBA57-AS1B1ANH7 110 aa6.29□□□□□ -1.4
HERC1-210ENST00000560897 BCL2L11O43521 198 aa6.29□□□□□ -1.4
HERC1-210ENST00000560897 CRYBA4P53673 196 aa6.29□□□□□ -1.4
HERC1-210ENST00000560897 SERF2P84101 59 aa6.29□□□□□ -1.4
HERC1-210ENST00000560897 RPL7L1Q6DKI1 246 aaKnown RBP6.29□□□□□ -1.4
HERC1-210ENST00000560897 ZNF680Q8NEM1 530 aa6.29□□□□□ -1.4
HERC1-210ENST00000560897 OR11H4Q8NGC9 324 aa6.29□□□□□ -1.4
HERC1-210ENST00000560897 C8orf49Q96NF6 230 aa6.29□□□□□ -1.4
HERC1-210ENST00000560897 MGST2Q99735 147 aa6.29□□□□□ -1.4
HERC1-210ENST00000560897 TXNDC17Q9BRA2 123 aa6.29□□□□□ -1.4
HERC1-210ENST00000560897 PARD6GQ9BYG4 376 aaPredicted RBP6.29□□□□□ -1.4
HERC1-210ENST00000560897 SLC45A2Q9UMX9 530 aa6.29□□□□□ -1.4
HERC1-210ENST00000560897 HHLA3Q9XRX5 114 aa6.29□□□□□ -1.4
HERC1-210ENST00000560897 IGKV1D-37A0A075B6S9 117 aa6.28□□□□□ -1.4
HERC1-210ENST00000560897 TRAV8-2A0A0B4J237 113 aa6.28□□□□□ -1.4
HERC1-210ENST00000560897 RNF222A6NCQ9 220 aa6.28□□□□□ -1.4
HERC1-210ENST00000560897 LECT2O14960 151 aa6.28□□□□□ -1.4
HERC1-210ENST00000560897 TAS2R45P59539 299 aa6.28□□□□□ -1.4
HERC1-210ENST00000560897 OPCMLQ14982 345 aa6.28□□□□□ -1.4
HERC1-210ENST00000560897 LELP1Q5T871 98 aa6.28□□□□□ -1.4
HERC1-210ENST00000560897 LINC00305Q7Z4B0 112 aa6.28□□□□□ -1.4
HERC1-210ENST00000560897 SLC51BQ86UW2 128 aa6.28□□□□□ -1.4
HERC1-210ENST00000560897 PYGO2Q9BRQ0 406 aa6.28□□□□□ -1.4
HERC1-210ENST00000560897 ARV1Q9H2C2 271 aa6.28□□□□□ -1.4
HERC1-210ENST00000560897 WFDC1Q9HC57 220 aa6.28□□□□□ -1.4
HERC1-210ENST00000560897 TIMM9Q9Y5J7 89 aa6.28□□□□□ -1.4
HERC1-210ENST00000560897 FAT4Q6V0I7 4981 aa6.28□□□□□ -1.4
HERC1-210ENST00000560897 IGKV1OR2-108A0A075B7D4 117 aa6.27□□□□□ -1.41
HERC1-210ENST00000560897 TRGV4A0A0C4DH28 118 aa6.27□□□□□ -1.41
HERC1-210ENST00000560897 C9JCJ5 164 aa6.27□□□□□ -1.41
HERC1-210ENST00000560897 TEX46H3BTG2 121 aa6.27□□□□□ -1.41
HERC1-210ENST00000560897 K7EQD1 137 aa6.27□□□□□ -1.41
HERC1-210ENST00000560897 RPL7P18124 248 aaKnown RBP6.27□□□□□ -1.41
HERC1-210ENST00000560897 CXCL2P19875 107 aa6.27□□□□□ -1.41
HERC1-210ENST00000560897 ATP6V0CP27449 155 aa6.27□□□□□ -1.41
HERC1-210ENST00000560897 PPT1P50897 306 aa6.27□□□□□ -1.41
HERC1-210ENST00000560897 NKX2-5P52952 324 aaPredicted RBP6.27□□□□□ -1.41
HERC1-210ENST00000560897 RAB2AP61019 212 aa6.27□□□□□ -1.41
HERC1-210ENST00000560897 WFDC2Q14508 124 aa6.27□□□□□ -1.41
HERC1-210ENST00000560897 LGALSLQ3ZCW2 172 aaPredicted RBP6.27□□□□□ -1.41
HERC1-210ENST00000560897 LINC01556Q5JQF7 62 aa6.27□□□□□ -1.41
HERC1-210ENST00000560897 GFI1BQ5VTD9 330 aa6.27□□□□□ -1.41
HERC1-210ENST00000560897 BPIFA4PQ86YQ2 179 aa6.27□□□□□ -1.41
HERC1-210ENST00000560897 SLC7A5P1Q8MH63 180 aa6.27□□□□□ -1.41
HERC1-210ENST00000560897 OR10G4Q8NGN3 311 aa6.27□□□□□ -1.41
HERC1-210ENST00000560897 OR10G9Q8NGN4 311 aa6.27□□□□□ -1.41
HERC1-210ENST00000560897 OR10G7Q8NGN6 311 aa6.27□□□□□ -1.41
HERC1-210ENST00000560897 STOML3Q8TAV4 291 aa6.27□□□□□ -1.41
HERC1-210ENST00000560897 PSMG3Q9BT73 122 aaPredicted RBP6.27□□□□□ -1.41
HERC1-210ENST00000560897 ACTR3CQ9C0K3 210 aaPredicted RBP6.27□□□□□ -1.41
HERC1-210ENST00000560897 GSN-AS1Q9NRJ2 163 aa6.27□□□□□ -1.41
HERC1-210ENST00000560897 ORM1P02763 201 aa6.26□□□□□ -1.41
HERC1-210ENST00000560897 PLP1P60201 277 aa6.26□□□□□ -1.41
HERC1-210ENST00000560897 FAM122CQ6P4D5 195 aa6.26□□□□□ -1.41
HERC1-210ENST00000560897 TMEM182Q6ZP80 229 aaPredicted RBP6.26□□□□□ -1.41
HERC1-210ENST00000560897 IQCF2Q8IXL9 164 aa6.26□□□□□ -1.41
HERC1-210ENST00000560897 RPUSD4Q96CM3 377 aaKnown RBP6.26□□□□□ -1.41
HERC1-210ENST00000560897 MRPL32Q9BYC8 188 aaKnown RBP6.26□□□□□ -1.41
HERC1-210ENST00000560897 AP5S1Q9NUS5 200 aa6.26□□□□□ -1.41
HERC1-210ENST00000560897 TRAV8-6A0A0B4J262 113 aa6.25□□□□□ -1.41
HERC1-210ENST00000560897 TRAV12-3A0A0B4J271 114 aa6.25□□□□□ -1.41
HERC1-210ENST00000560897 UMAD1C9J7I0 102 aa6.25□□□□□ -1.41
HERC1-210ENST00000560897 G3V3Q6 166 aa6.25□□□□□ -1.41
HERC1-210ENST00000560897 OR7C2O60412 319 aa6.25□□□□□ -1.41
HERC1-210ENST00000560897 SEC11BP0C7V7 166 aa6.25□□□□□ -1.41
HERC1-210ENST00000560897 BLNKQ8WV28 456 aa6.25□□□□□ -1.41
HERC1-210ENST00000560897 VGLL1Q99990 258 aa6.25□□□□□ -1.41
HERC1-210ENST00000560897 SHANK2-AS3Q9BTD1 123 aa6.25□□□□□ -1.41
HERC1-210ENST00000560897 PAXXQ9BUH6 204 aa6.25□□□□□ -1.41
HERC1-210ENST00000560897 LINC00862A6NCI5 91 aa6.24□□□□□ -1.41
HERC1-210ENST00000560897 SPINK4O60575 86 aa6.24□□□□□ -1.41
HERC1-210ENST00000560897 IGHV3-30P01768 117 aa6.24□□□□□ -1.41
HERC1-210ENST00000560897 IGHV3-33P01772 117 aa6.24□□□□□ -1.41
HERC1-210ENST00000560897 IGHV3-30-3P0DP02 117 aa6.24□□□□□ -1.41
HERC1-210ENST00000560897 IGHV3-30-5P0DP03 117 aa6.24□□□□□ -1.41
HERC1-210ENST00000560897 LEPP41159 167 aa6.24□□□□□ -1.41
HERC1-210ENST00000560897 CDC34P49427 236 aaPredicted RBP6.24□□□□□ -1.41
HERC1-210ENST00000560897 RAB5CP51148 216 aa6.24□□□□□ -1.41
HERC1-210ENST00000560897 LAGE3Q14657 143 aa6.24□□□□□ -1.41
HERC1-210ENST00000560897 KHDC3LQ587J8 217 aa6.24□□□□□ -1.41
HERC1-210ENST00000560897 OR10J3Q5JRS4 329 aa6.24□□□□□ -1.41
HERC1-210ENST00000560897 C9orf47Q6ZRZ4 202 aa6.24□□□□□ -1.41
HERC1-210ENST00000560897 SH2D6Q7Z4S9 175 aa6.24□□□□□ -1.41
HERC1-210ENST00000560897 C9orf62Q8N4C0 152 aa6.24□□□□□ -1.41
HERC1-210ENST00000560897 FHL2Q14192 279 aa6.23□□□□□ -1.41
HERC1-210ENST00000560897 GUK1Q16774 197 aa6.23□□□□□ -1.41
HERC1-210ENST00000560897 FAM74A1Q5RGS3 127 aa6.23□□□□□ -1.41
HERC1-210ENST00000560897 PATE2Q6UY27 113 aa6.23□□□□□ -1.41
HERC1-210ENST00000560897 Q8N976 141 aa6.23□□□□□ -1.41
HERC1-210ENST00000560897 NHLRC2Q8NBF2 726 aa6.23□□□□□ -1.41
HERC1-210ENST00000560897 FAM213BQ8TBF2 198 aa6.23□□□□□ -1.41
HERC1-210ENST00000560897 TMED6Q8WW62 240 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms