RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 OR11H6Q8NGC7 330 aa10.66□□□□□ -0.7
TRAF3-208ENST00000560371 CENPVL3A0A0U1RRI6 287 aa10.66□□□□□ -0.7
TRAF3-208ENST00000560371 PRSS46E5RG02 174 aa10.66□□□□□ -0.7
TRAF3-208ENST00000560371 ZFAND6Q6FIF0 208 aa10.66□□□□□ -0.7
TRAF3-208ENST00000560371 C2orf82Q6UX34 121 aa10.66□□□□□ -0.7
TRAF3-208ENST00000560371 UBE2CO00762 179 aa10.66□□□□□ -0.7
TRAF3-208ENST00000560371 IGHV4-38-2P0DP08 117 aa10.66□□□□□ -0.7
TRAF3-208ENST00000560371 ADORA2A-AS1P86434 159 aa10.65□□□□□ -0.7
TRAF3-208ENST00000560371 TMEM14CQ9P0S9 112 aa10.65□□□□□ -0.7
TRAF3-208ENST00000560371 FAM231BA6NCW3 169 aa10.65□□□□□ -0.7
TRAF3-208ENST00000560371 DNAJC30Q96LL9 226 aa10.65□□□□□ -0.7
TRAF3-208ENST00000560371 NDUFAF3Q9BU61 184 aa10.65□□□□□ -0.7
TRAF3-208ENST00000560371 HIST3H2BBQ8N257 126 aa10.65□□□□□ -0.7
TRAF3-208ENST00000560371 SDHAF1A6NFY7 115 aa10.65□□□□□ -0.7
TRAF3-208ENST00000560371 SIGMAR1Q99720 223 aa10.65□□□□□ -0.7
TRAF3-208ENST00000560371 A0A096LPF7 62 aa10.65□□□□□ -0.7
TRAF3-208ENST00000560371 OVOL2Q9BRP0 275 aa10.65□□□□□ -0.7
TRAF3-208ENST00000560371 COLCA2A8K830 154 aa10.65□□□□□ -0.71
TRAF3-208ENST00000560371 CT83Q5H943 113 aa10.64□□□□□ -0.71
TRAF3-208ENST00000560371 IGHV3-38A0A0C4DH36 116 aa10.64□□□□□ -0.71
TRAF3-208ENST00000560371 PFN2P35080 140 aa10.64□□□□□ -0.71
TRAF3-208ENST00000560371 C8orf31Q8N9H6 132 aa10.64□□□□□ -0.71
TRAF3-208ENST00000560371 ZNF492Q9P255 531 aa10.64□□□□□ -0.71
TRAF3-208ENST00000560371 GAGE2BQ13066 116 aa10.64□□□□□ -0.71
TRAF3-208ENST00000560371 PRB2P02812 416 aaPredicted RBP10.64□□□□□ -0.71
TRAF3-208ENST00000560371 CHAC1Q9BUX1 264 aa10.64□□□□□ -0.71
TRAF3-208ENST00000560371 FASNP49327 2511 aaKnown RBP10.64□□□□□ -0.71
TRAF3-208ENST00000560371 IGLV3-1P01715 115 aa10.64□□□□□ -0.71
TRAF3-208ENST00000560371 FOXI2Q6ZQN5 318 aa10.64□□□□□ -0.71
TRAF3-208ENST00000560371 NOP10Q9NPE3 64 aaKnown RBP10.64□□□□□ -0.71
TRAF3-208ENST00000560371 CHD8Q9HCK8 2581 aa10.64□□□□□ -0.71
TRAF3-208ENST00000560371 HLA-DRB4P13762 266 aa10.63□□□□□ -0.71
TRAF3-208ENST00000560371 DEFB105AQ8NG35 78 aa10.63□□□□□ -0.71
TRAF3-208ENST00000560371 NAA38Q9BRA0 125 aaKnown RBP10.63□□□□□ -0.71
TRAF3-208ENST00000560371 HLA-DRB4X5D2U9 266 aa10.63□□□□□ -0.71
TRAF3-208ENST00000560371 TAL2Q16559 108 aa10.63□□□□□ -0.71
TRAF3-208ENST00000560371 PYGO2Q9BRQ0 406 aa10.63□□□□□ -0.71
TRAF3-208ENST00000560371 TRAV12-1A0A0B4J245 112 aa10.63□□□□□ -0.71
TRAF3-208ENST00000560371 IGKV1-39P01597 117 aa10.63□□□□□ -0.71
TRAF3-208ENST00000560371 IGKV1D-39P04432 117 aa10.63□□□□□ -0.71
TRAF3-208ENST00000560371 FOXE3Q13461 319 aa10.63□□□□□ -0.71
TRAF3-208ENST00000560371 FAM104BQ5XKR9 115 aa10.63□□□□□ -0.71
TRAF3-208ENST00000560371 BLCAPP62952 87 aa10.63□□□□□ -0.71
TRAF3-208ENST00000560371 SRSF2Q01130 221 aaKnown RBP10.63□□□□□ -0.71
TRAF3-208ENST00000560371 C5orf47Q569G3 176 aa10.63□□□□□ -0.71
TRAF3-208ENST00000560371 CYYR1Q96J86 154 aa10.63□□□□□ -0.71
TRAF3-208ENST00000560371 C2orf66Q6UXQ4 117 aa10.63□□□□□ -0.71
TRAF3-208ENST00000560371 MRPL53Q96EL3 112 aaKnown RBP10.62□□□□□ -0.71
TRAF3-208ENST00000560371 UBE2BP63146 152 aa10.62□□□□□ -0.71
TRAF3-208ENST00000560371 A0A087X0K7 114 aa10.62□□□□□ -0.71
TRAF3-208ENST00000560371 PMVKQ15126 192 aa10.62□□□□□ -0.71
TRAF3-208ENST00000560371 ZNF491Q8N8L2 437 aa10.62□□□□□ -0.71
TRAF3-208ENST00000560371 VOPP1Q96AW1 172 aa10.62□□□□□ -0.71
TRAF3-208ENST00000560371 POU2AF1Q16633 256 aa10.62□□□□□ -0.71
TRAF3-208ENST00000560371 C11orf53Q8IXP5 236 aa10.62□□□□□ -0.71
TRAF3-208ENST00000560371 TMEM141Q96I45 108 aa10.62□□□□□ -0.71
TRAF3-208ENST00000560371 C3orf79P0CE67 100 aa10.62□□□□□ -0.71
TRAF3-208ENST00000560371 C10orf105Q8TEF2 133 aa10.62□□□□□ -0.71
TRAF3-208ENST00000560371 SLURP1P55000 103 aa10.61□□□□□ -0.71
TRAF3-208ENST00000560371 GP9P14770 177 aa10.61□□□□□ -0.71
TRAF3-208ENST00000560371 RSPO3Q9BXY4 272 aaPredicted RBP10.61□□□□□ -0.71
TRAF3-208ENST00000560371 CLPSL2Q6UWE3 100 aa10.61□□□□□ -0.71
TRAF3-208ENST00000560371 IGLC7A0M8Q6 106 aa10.61□□□□□ -0.71
TRAF3-208ENST00000560371 COL4A4P53420 1690 aaPredicted RBP10.61□□□□□ -0.71
TRAF3-208ENST00000560371 DAZAP2Q15038 168 aaPredicted RBP10.6□□□□□ -0.71
TRAF3-208ENST00000560371 RHOHQ15669 191 aa10.6□□□□□ -0.71
TRAF3-208ENST00000560371 PRSS57Q6UWY2 283 aa10.6□□□□□ -0.71
TRAF3-208ENST00000560371 EXPH5Q8NEV8 1989 aa10.6□□□□□ -0.71
TRAF3-208ENST00000560371 SPRNQ5BIV9 151 aa10.6□□□□□ -0.71
TRAF3-208ENST00000560371 MRPL51Q4U2R6 128 aaKnown RBP10.59□□□□□ -0.71
TRAF3-208ENST00000560371 A0A0J9YY99 117 aa10.59□□□□□ -0.71
TRAF3-208ENST00000560371 A8MWP6 167 aa10.59□□□□□ -0.71
TRAF3-208ENST00000560371 PIFOQ8TCI5 191 aa10.59□□□□□ -0.71
TRAF3-208ENST00000560371 USP9YO00507 2555 aaPredicted RBP10.59□□□□□ -0.71
TRAF3-208ENST00000560371 TRAV26-2A0A0B4J265 109 aa10.59□□□□□ -0.71
TRAF3-208ENST00000560371 FXYD5Q96DB9 178 aa10.59□□□□□ -0.71
TRAF3-208ENST00000560371 U3KQE9 123 aa10.59□□□□□ -0.71
TRAF3-208ENST00000560371 CHKB-CPT1BH3BT56 60 aa10.59□□□□□ -0.71
TRAF3-208ENST00000560371 KLF5Q13887 457 aaPredicted RBP10.59□□□□□ -0.71
TRAF3-208ENST00000560371 IGKV2D-24A0A075B6R9 120 aa10.59□□□□□ -0.71
TRAF3-208ENST00000560371 IGHV1-24A0A0C4DH33 117 aa10.59□□□□□ -0.71
TRAF3-208ENST00000560371 Q9HAA7 133 aa10.58□□□□□ -0.72
TRAF3-208ENST00000560371 HAMPP81172 84 aa10.58□□□□□ -0.72
TRAF3-208ENST00000560371 Q8N8P6 123 aa10.58□□□□□ -0.72
TRAF3-208ENST00000560371 IGFBPL1Q8WX77 278 aa10.58□□□□□ -0.72
TRAF3-208ENST00000560371 ZC2HC1AQ96GY0 325 aa10.58□□□□□ -0.72
TRAF3-208ENST00000560371 Q8NFD4 153 aa10.58□□□□□ -0.72
TRAF3-208ENST00000560371 IGHV7-81A0A0B4J1V7 117 aa10.58□□□□□ -0.72
TRAF3-208ENST00000560371 F6UB75 175 aa10.58□□□□□ -0.72
TRAF3-208ENST00000560371 NXPH4O95158 308 aa10.58□□□□□ -0.72
TRAF3-208ENST00000560371 APRG1Q8IVJ8 170 aa10.58□□□□□ -0.72
TRAF3-208ENST00000560371 STPG4Q8N801 248 aa10.58□□□□□ -0.72
TRAF3-208ENST00000560371 NEGR1Q7Z3B1 354 aa10.57□□□□□ -0.72
TRAF3-208ENST00000560371 SMIM2Q9BVW6 85 aa10.57□□□□□ -0.72
TRAF3-208ENST00000560371 A0A1W2PNU3 283 aaPredicted RBP10.57□□□□□ -0.72
TRAF3-208ENST00000560371 IGLV2-23P01705 113 aa10.57□□□□□ -0.72
TRAF3-208ENST00000560371 IGKV1OR2-108A0A075B7D4 117 aa10.56□□□□□ -0.72
TRAF3-208ENST00000560371 TEX48A0A1B0GUV7 120 aa10.56□□□□□ -0.72
TRAF3-208ENST00000560371 PLA2G5P39877 138 aa10.56□□□□□ -0.72
TRAF3-208ENST00000560371 SPART-AS1P0CW21 52 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms