RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 FAM74A1Q5RGS3 127 aa11.72□□□□□ -0.53
CRTC3-208ENST00000560098 MBD2Q9UBB5 411 aa11.72□□□□□ -0.53
CRTC3-208ENST00000560098 NHLRC2Q8NBF2 726 aa11.71□□□□□ -0.53
CRTC3-208ENST00000560098 SMIM3Q9BZL3 60 aa11.71□□□□□ -0.53
CRTC3-208ENST00000560098 IGHV3-38A0A0C4DH36 116 aa11.7□□□□□ -0.54
CRTC3-208ENST00000560098 INMT-MINDY4F8WBC2 141 aa11.7□□□□□ -0.54
CRTC3-208ENST00000560098 TYMSP04818 313 aa11.7□□□□□ -0.54
CRTC3-208ENST00000560098 PET100P0DJ07 73 aa11.7□□□□□ -0.54
CRTC3-208ENST00000560098 GATA1P15976 413 aaPredicted RBP11.7□□□□□ -0.54
CRTC3-208ENST00000560098 TIRAPP58753 221 aa11.7□□□□□ -0.54
CRTC3-208ENST00000560098 GOLT1AQ6ZVE7 132 aa11.7□□□□□ -0.54
CRTC3-208ENST00000560098 ARL6IP6Q8N6S5 226 aa11.7□□□□□ -0.54
CRTC3-208ENST00000560098 SDF2L1Q9HCN8 221 aa11.7□□□□□ -0.54
CRTC3-208ENST00000560098 F6UZH7 168 aa11.69□□□□□ -0.54
CRTC3-208ENST00000560098 UPK1BO75841 260 aa11.69□□□□□ -0.54
CRTC3-208ENST00000560098 MPC2O95563 127 aa11.69□□□□□ -0.54
CRTC3-208ENST00000560098 SMR3BP02814 79 aaPredicted RBP11.69□□□□□ -0.54
CRTC3-208ENST00000560098 RPL12P30050 165 aaKnown RBP11.69□□□□□ -0.54
CRTC3-208ENST00000560098 PPT1P50897 306 aa11.69□□□□□ -0.54
CRTC3-208ENST00000560098 TVP23CQ96ET8 276 aa11.69□□□□□ -0.54
CRTC3-208ENST00000560098 KCNS1Q96KK3 526 aa11.69□□□□□ -0.54
CRTC3-208ENST00000560098 TREM1Q9NP99 234 aa11.69□□□□□ -0.54
CRTC3-208ENST00000560098 MYCBP2O75592 4640 aa11.69□□□□□ -0.54
CRTC3-208ENST00000560098 DMBT1Q9UGM3 2413 aaPredicted RBP11.69□□□□□ -0.54
CRTC3-208ENST00000560098 TRAV8-1A0A0A6YYK1 113 aa11.69□□□□□ -0.54
CRTC3-208ENST00000560098 PSCAO43653 123 aa11.69□□□□□ -0.54
CRTC3-208ENST00000560098 LINC01556Q5JQF7 62 aa11.69□□□□□ -0.54
CRTC3-208ENST00000560098 PQLC2Q6ZP29 291 aa11.69□□□□□ -0.54
CRTC3-208ENST00000560098 IGLV5-52A0A0A0MRZ9 124 aa11.68□□□□□ -0.54
CRTC3-208ENST00000560098 A0A1W2PPV4 95 aa11.68□□□□□ -0.54
CRTC3-208ENST00000560098 LRCOL1A6NCL2 159 aa11.68□□□□□ -0.54
CRTC3-208ENST00000560098 ACOT6Q3I5F7 207 aaPredicted RBP11.68□□□□□ -0.54
CRTC3-208ENST00000560098 ASB13Q8WXK3 278 aa11.68□□□□□ -0.54
CRTC3-208ENST00000560098 SRRM2Q9UQ35 2752 aaKnown RBP11.67□□□□□ -0.54
CRTC3-208ENST00000560098 FBLL1A6NHQ2 334 aaKnown RBP11.67□□□□□ -0.54
CRTC3-208ENST00000560098 IBA57-AS1B1ANH7 110 aa11.67□□□□□ -0.54
CRTC3-208ENST00000560098 PFN1P07737 140 aaKnown RBP11.67□□□□□ -0.54
CRTC3-208ENST00000560098 GNG5P63218 68 aa11.67□□□□□ -0.54
CRTC3-208ENST00000560098 IFITM3Q01628 133 aa11.67□□□□□ -0.54
CRTC3-208ENST00000560098 NTN5Q8WTR8 489 aaPredicted RBP11.67□□□□□ -0.54
CRTC3-208ENST00000560098 MARVELD1Q9BSK0 173 aa11.67□□□□□ -0.54
CRTC3-208ENST00000560098 BOLA1Q9Y3E2 137 aa11.67□□□□□ -0.54
CRTC3-208ENST00000560098 TRAV8-6A0A0B4J262 113 aa11.66□□□□□ -0.54
CRTC3-208ENST00000560098 SSNA1O43805 119 aa11.66□□□□□ -0.54
CRTC3-208ENST00000560098 ZNF876PQ49A33 203 aa11.66□□□□□ -0.54
CRTC3-208ENST00000560098 SLC25A29Q8N8R3 303 aa11.66□□□□□ -0.54
CRTC3-208ENST00000560098 WFDC1Q9HC57 220 aa11.66□□□□□ -0.54
CRTC3-208ENST00000560098 FAM229AH3BQW9 127 aa11.65□□□□□ -0.54
CRTC3-208ENST00000560098 CIDEAO60543 219 aa11.65□□□□□ -0.54
CRTC3-208ENST00000560098 RAB2AP61019 212 aa11.65□□□□□ -0.54
CRTC3-208ENST00000560098 HAMPP81172 84 aa11.65□□□□□ -0.54
CRTC3-208ENST00000560098 OR10J3Q5JRS4 329 aa11.65□□□□□ -0.54
CRTC3-208ENST00000560098 SGK494Q96LW2 274 aa11.65□□□□□ -0.54
CRTC3-208ENST00000560098 PRADC1Q9BSG0 188 aa11.65□□□□□ -0.54
CRTC3-208ENST00000560098 NDFIP1Q9BT67 221 aa11.65□□□□□ -0.54
CRTC3-208ENST00000560098 TMEM70Q9BUB7 260 aa11.65□□□□□ -0.54
CRTC3-208ENST00000560098 TRBV6-4A0A1B0GX49 114 aa11.64□□□□□ -0.55
CRTC3-208ENST00000560098 HMGB3O15347 200 aaKnown RBP11.64□□□□□ -0.55
CRTC3-208ENST00000560098 RS1O15537 224 aa11.64□□□□□ -0.55
CRTC3-208ENST00000560098 RHOHQ15669 191 aa11.64□□□□□ -0.55
CRTC3-208ENST00000560098 CFAP126Q5VTH2 177 aa11.64□□□□□ -0.55
CRTC3-208ENST00000560098 Q8N814 137 aa11.64□□□□□ -0.55
CRTC3-208ENST00000560098 OR10G9Q8NGN4 311 aa11.64□□□□□ -0.55
CRTC3-208ENST00000560098 OR10G7Q8NGN6 311 aa11.64□□□□□ -0.55
CRTC3-208ENST00000560098 Q9HAA7 133 aa11.64□□□□□ -0.55
CRTC3-208ENST00000560098 SERTM2A0A1B0GWG4 89 aa11.63□□□□□ -0.55
CRTC3-208ENST00000560098 DPPA3Q6W0C5 159 aa11.63□□□□□ -0.55
CRTC3-208ENST00000560098 IGHV3-73A0A0B4J1V6 119 aa11.62□□□□□ -0.55
CRTC3-208ENST00000560098 ZNF80P51504 273 aaPredicted RBP11.62□□□□□ -0.55
CRTC3-208ENST00000560098 LELP1Q5T871 98 aa11.62□□□□□ -0.55
CRTC3-208ENST00000560098 C11orf21Q9P2W6 132 aa11.62□□□□□ -0.55
CRTC3-208ENST00000560098 DNAH8Q96JB1 4490 aa11.62□□□□□ -0.55
CRTC3-208ENST00000560098 TAAR5O14804 337 aa11.61□□□□□ -0.55
CRTC3-208ENST00000560098 IGHV3-30P01768 117 aa11.61□□□□□ -0.55
CRTC3-208ENST00000560098 IGHV3-33P01772 117 aa11.61□□□□□ -0.55
CRTC3-208ENST00000560098 ARL14EPLP0DKL9 152 aa11.61□□□□□ -0.55
CRTC3-208ENST00000560098 IGHV3-30-3P0DP02 117 aa11.61□□□□□ -0.55
CRTC3-208ENST00000560098 IGHV3-30-5P0DP03 117 aa11.61□□□□□ -0.55
CRTC3-208ENST00000560098 Q6ZSN1 163 aa11.61□□□□□ -0.55
CRTC3-208ENST00000560098 C5orf17Q8NAS9 161 aa11.61□□□□□ -0.55
CRTC3-208ENST00000560098 C9orf85Q96MD7 179 aa11.61□□□□□ -0.55
CRTC3-208ENST00000560098 GCGP01275 180 aa11.6□□□□□ -0.55
CRTC3-208ENST00000560098 TCRAP04437 139 aa11.6□□□□□ -0.55
CRTC3-208ENST00000560098 CDC34P49427 236 aaPredicted RBP11.6□□□□□ -0.55
CRTC3-208ENST00000560098 GTSF1LQ9H1H1 148 aa11.6□□□□□ -0.55
CRTC3-208ENST00000560098 PSG8Q9UQ74 426 aa11.6□□□□□ -0.55
CRTC3-208ENST00000560098 PGPEP1LA6NFU8 196 aa11.6□□□□□ -0.55
CRTC3-208ENST00000560098 K7EQM0 130 aa11.6□□□□□ -0.55
CRTC3-208ENST00000560098 STAG3L2P0CL84 134 aa11.6□□□□□ -0.55
CRTC3-208ENST00000560098 STAG3L3P0CL85 134 aa11.6□□□□□ -0.55
CRTC3-208ENST00000560098 MGST1P10620 155 aaKnown RBP11.6□□□□□ -0.55
CRTC3-208ENST00000560098 TMEM75Q8N9X5 138 aa11.6□□□□□ -0.55
CRTC3-208ENST00000560098 ATP6V0E2Q8NHE4 81 aa11.6□□□□□ -0.55
CRTC3-208ENST00000560098 PTH2Q96A98 100 aa11.6□□□□□ -0.55
CRTC3-208ENST00000560098 LAGE3Q14657 143 aa11.59□□□□□ -0.55
CRTC3-208ENST00000560098 ZNF506Q5JVG8 444 aa11.59□□□□□ -0.55
CRTC3-208ENST00000560098 SUN5Q8TC36 379 aa11.59□□□□□ -0.55
CRTC3-208ENST00000560098 IGLV2-11P01706 119 aa11.58□□□□□ -0.56
CRTC3-208ENST00000560098 RNASE3P12724 160 aaKnown RBP11.58□□□□□ -0.56
CRTC3-208ENST00000560098 DEFA1P59665 94 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms