RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 C3orf22Q8N5N4 141 aa14.86□□□□□ -0.03
SEMA4B-215ENST00000560089 KLK5Q9Y337 293 aaPredicted RBP14.86□□□□□ -0.03
SEMA4B-215ENST00000560089 PCNX1Q96RV3 2341 aa14.86□□□□□ -0.03
SEMA4B-215ENST00000560089 IGLV2-18A0A075B6J9 118 aa14.86□□□□□ -0.03
SEMA4B-215ENST00000560089 IGHV3-21A0A0B4J1V1 117 aa14.86□□□□□ -0.03
SEMA4B-215ENST00000560089 FAM236AA0A1B0GUQ0 79 aa14.86□□□□□ -0.03
SEMA4B-215ENST00000560089 FAM236BA0A1B0GV22 79 aa14.86□□□□□ -0.03
SEMA4B-215ENST00000560089 A0A1B0GX51 115 aa14.86□□□□□ -0.03
SEMA4B-215ENST00000560089 H3BMM0 161 aa14.86□□□□□ -0.03
SEMA4B-215ENST00000560089 ZNF474Q6S9Z5 364 aaPredicted RBP14.86□□□□□ -0.03
SEMA4B-215ENST00000560089 ZNRF1Q8ND25 227 aa14.86□□□□□ -0.03
SEMA4B-215ENST00000560089 UBE2WQ96B02 151 aa14.86□□□□□ -0.03
SEMA4B-215ENST00000560089 MRPS12O15235 138 aaKnown RBP14.85□□□□□ -0.03
SEMA4B-215ENST00000560089 CECR9P0C854 216 aa14.85□□□□□ -0.03
SEMA4B-215ENST00000560089 C17orf58Q2M2W7 97 aa14.85□□□□□ -0.03
SEMA4B-215ENST00000560089 IGKV1D-17A0A075B6S4 117 aa14.85□□□□□ -0.03
SEMA4B-215ENST00000560089 TRAV12-1A0A0B4J245 112 aa14.85□□□□□ -0.03
SEMA4B-215ENST00000560089 IGLC6P0CF74 106 aa14.85□□□□□ -0.03
SEMA4B-215ENST00000560089 OR4C13Q8NGP0 309 aa14.84□□□□□ -0.03
SEMA4B-215ENST00000560089 KLF14Q8TD94 323 aaPredicted RBP14.84□□□□□ -0.03
SEMA4B-215ENST00000560089 DKK4Q9UBT3 224 aa14.84□□□□□ -0.03
SEMA4B-215ENST00000560089 TRBV19A0A075B6N1 114 aa14.84□□□□□ -0.03
SEMA4B-215ENST00000560089 CGB1A6NKQ9 187 aa14.84□□□□□ -0.03
SEMA4B-215ENST00000560089 M0R3E3 92 aa14.84□□□□□ -0.03
SEMA4B-215ENST00000560089 RPUSD1Q9UJJ7 312 aaKnown RBP14.84□□□□□ -0.03
SEMA4B-215ENST00000560089 ARFGEF3Q5TH69 2177 aa14.84□□□□□ -0.03
SEMA4B-215ENST00000560089 EGR2P11161 476 aaPredicted RBP14.84□□□□□ -0.03
SEMA4B-215ENST00000560089 MFAP4P55083 255 aa14.84□□□□□ -0.03
SEMA4B-215ENST00000560089 TRBV7-7A0A0K0K1E9 115 aa14.83□□□□□ -0.04
SEMA4B-215ENST00000560089 SEM1Q6ZVN7 128 aa14.83□□□□□ -0.04
SEMA4B-215ENST00000560089 Q8NA96 180 aa14.83□□□□□ -0.04
SEMA4B-215ENST00000560089 PRR25Q96S07 402 aa14.83□□□□□ -0.04
SEMA4B-215ENST00000560089 ZNRD1Q9P1U0 126 aa14.83□□□□□ -0.04
SEMA4B-215ENST00000560089 HCP5Q6MZN7 132 aa14.83□□□□□ -0.04
SEMA4B-215ENST00000560089 SIGLEC15Q6ZMC9 328 aa14.83□□□□□ -0.04
SEMA4B-215ENST00000560089 KLHL30-AS1Q8NEE0 82 aa14.83□□□□□ -0.04
SEMA4B-215ENST00000560089 C1orf162Q8NEQ5 155 aaPredicted RBP14.83□□□□□ -0.04
SEMA4B-215ENST00000560089 TRGV11A0A075B6L2 103 aa14.82□□□□□ -0.04
SEMA4B-215ENST00000560089 LINC01620Q4KN68 170 aa14.82□□□□□ -0.04
SEMA4B-215ENST00000560089 DSCAML1Q8TD84 2053 aa14.82□□□□□ -0.04
SEMA4B-215ENST00000560089 RBAKDNA6NC62 111 aa14.82□□□□□ -0.04
SEMA4B-215ENST00000560089 H7C2G1 150 aa14.81□□□□□ -0.04
SEMA4B-215ENST00000560089 IGHV1-2P23083 117 aa14.81□□□□□ -0.04
SEMA4B-215ENST00000560089 PMVKQ15126 192 aa14.81□□□□□ -0.04
SEMA4B-215ENST00000560089 UQCRQO14949 82 aa14.81□□□□□ -0.04
SEMA4B-215ENST00000560089 COX6B1P14854 86 aa14.81□□□□□ -0.04
SEMA4B-215ENST00000560089 ATXN8Q156A1 80 aa14.81□□□□□ -0.04
SEMA4B-215ENST00000560089 F5H768 121 aa14.8□□□□□ -0.04
SEMA4B-215ENST00000560089 CD3EP07766 207 aa14.8□□□□□ -0.04
SEMA4B-215ENST00000560089 A0A0J9YY99 117 aa14.8□□□□□ -0.04
SEMA4B-215ENST00000560089 TIMM8AO60220 97 aaPredicted RBP14.8□□□□□ -0.04
SEMA4B-215ENST00000560089 IGHV4-39P01824 125 aa14.8□□□□□ -0.04
SEMA4B-215ENST00000560089 CGB3P0DN86 165 aa14.8□□□□□ -0.04
SEMA4B-215ENST00000560089 CGB7P0DN87 165 aa14.8□□□□□ -0.04
SEMA4B-215ENST00000560089 KLK15Q9H2R5 256 aa14.8□□□□□ -0.04
SEMA4B-215ENST00000560089 IGHV3-30P01768 117 aa14.79□□□□□ -0.04
SEMA4B-215ENST00000560089 IGHV3-30-5P0DP03 117 aa14.79□□□□□ -0.04
SEMA4B-215ENST00000560089 DTX2Q86UW9 622 aa14.79□□□□□ -0.04
SEMA4B-215ENST00000560089 FAM215AQ9Y5M1 114 aa14.79□□□□□ -0.04
SEMA4B-215ENST00000560089 TMEM219Q86XT9 240 aa14.79□□□□□ -0.04
SEMA4B-215ENST00000560089 COL6A6A6NMZ7 2263 aa14.79□□□□□ -0.04
SEMA4B-215ENST00000560089 CACNA1AO00555 2505 aa14.79□□□□□ -0.04
SEMA4B-215ENST00000560089 TMEM190Q8WZ59 177 aa14.79□□□□□ -0.04
SEMA4B-215ENST00000560089 PLGLAQ15195 96 aa14.78□□□□□ -0.04
SEMA4B-215ENST00000560089 LINC00526Q96FQ7 95 aa14.78□□□□□ -0.04
SEMA4B-215ENST00000560089 TRBV10-2A0A0K0K1G8 114 aa14.78□□□□□ -0.04
SEMA4B-215ENST00000560089 CEMP1Q6PRD7 247 aaPredicted RBP14.78□□□□□ -0.04
SEMA4B-215ENST00000560089 LYPD1Q8N2G4 141 aa14.78□□□□□ -0.04
SEMA4B-215ENST00000560089 TMEM167AQ8TBQ9 72 aa14.78□□□□□ -0.04
SEMA4B-215ENST00000560089 SCGB3A1Q96QR1 104 aa14.78□□□□□ -0.04
SEMA4B-215ENST00000560089 POM121L12Q8N7R1 296 aa14.77□□□□□ -0.04
SEMA4B-215ENST00000560089 RPS28P62857 69 aaKnown RBP14.77□□□□□ -0.05
SEMA4B-215ENST00000560089 Q6ZS46 218 aa14.77□□□□□ -0.05
SEMA4B-215ENST00000560089 ORM1P02763 201 aa14.76□□□□□ -0.05
SEMA4B-215ENST00000560089 P0DMU3 169 aa14.76□□□□□ -0.05
SEMA4B-215ENST00000560089 FAM231AP0DMU4 169 aa14.76□□□□□ -0.05
SEMA4B-215ENST00000560089 FAM231CP0DMU5 169 aa14.76□□□□□ -0.05
SEMA4B-215ENST00000560089 EBI3Q14213 229 aa14.76□□□□□ -0.05
SEMA4B-215ENST00000560089 NEXN-AS1Q8NBZ9 246 aa14.76□□□□□ -0.05
SEMA4B-215ENST00000560089 HERVK_113P61574 105 aa14.76□□□□□ -0.05
SEMA4B-215ENST00000560089 IGHV3-33P01772 117 aa14.75□□□□□ -0.05
SEMA4B-215ENST00000560089 ELANEP08246 267 aa14.75□□□□□ -0.05
SEMA4B-215ENST00000560089 Q1RN00 199 aa14.75□□□□□ -0.05
SEMA4B-215ENST00000560089 C2orf82Q6UX34 121 aa14.75□□□□□ -0.05
SEMA4B-215ENST00000560089 APELAP0DMC3 54 aa14.75□□□□□ -0.05
SEMA4B-215ENST00000560089 Q6ZT83 130 aa14.75□□□□□ -0.05
SEMA4B-215ENST00000560089 DUX3Q96PT4 197 aa14.74□□□□□ -0.05
SEMA4B-215ENST00000560089 CNFNQ9BYD5 112 aa14.74□□□□□ -0.05
SEMA4B-215ENST00000560089 TRAV26-2A0A0B4J265 109 aa14.74□□□□□ -0.05
SEMA4B-215ENST00000560089 FAM240AA0A1B0GVK7 77 aa14.74□□□□□ -0.05
SEMA4B-215ENST00000560089 ZNF80P51504 273 aaPredicted RBP14.74□□□□□ -0.05
SEMA4B-215ENST00000560089 TEX36Q5VZQ5 186 aa14.74□□□□□ -0.05
SEMA4B-215ENST00000560089 GFRALQ6UXV0 394 aa14.74□□□□□ -0.05
SEMA4B-215ENST00000560089 LINC01600Q96MT4 127 aa14.74□□□□□ -0.05
SEMA4B-215ENST00000560089 CADP27708 2225 aa14.74□□□□□ -0.05
SEMA4B-215ENST00000560089 SRRM5B3KS81 715 aa14.74□□□□□ -0.05
SEMA4B-215ENST00000560089 MZT1Q08AG7 82 aa14.74□□□□□ -0.05
SEMA4B-215ENST00000560089 GAGE2AQ6NT46 116 aa14.74□□□□□ -0.05
SEMA4B-215ENST00000560089 PLXNB1O43157 2135 aa14.73□□□□□ -0.05
SEMA4B-215ENST00000560089 PKD1L2Q7Z442 2459 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms