RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 M0R381 172 aa7.61□□□□□ -1.19
LRRC28-216ENST00000559819 CD5LO43866 347 aa7.61□□□□□ -1.19
LRRC28-216ENST00000559819 PRSS1P07477 247 aa7.61□□□□□ -1.19
LRRC28-216ENST00000559819 AMMECR1LQ6DCA0 310 aa7.61□□□□□ -1.19
LRRC28-216ENST00000559819 SMIM15Q7Z3B0 74 aa7.61□□□□□ -1.19
LRRC28-216ENST00000559819 DPF1Q92782 380 aa7.61□□□□□ -1.19
LRRC28-216ENST00000559819 IGKV2D-26A0A0A0MRZ7 120 aa7.61□□□□□ -1.19
LRRC28-216ENST00000559819 OR4C5Q8NGB2 326 aa7.61□□□□□ -1.19
LRRC28-216ENST00000559819 RNASE8Q8TDE3 154 aaKnown RBP7.61□□□□□ -1.19
LRRC28-216ENST00000559819 NPFFR1Q9GZQ6 430 aa7.61□□□□□ -1.19
LRRC28-216ENST00000559819 SPG11Q96JI7 2443 aa7.61□□□□□ -1.19
LRRC28-216ENST00000559819 TRAV8-6A0A0B4J262 113 aa7.6□□□□□ -1.19
LRRC28-216ENST00000559819 C7orf71A4D174 169 aa7.6□□□□□ -1.19
LRRC28-216ENST00000559819 RNASE4P34096 147 aaKnown RBP7.6□□□□□ -1.19
LRRC28-216ENST00000559819 OR10J6PQ8NGY7 276 aa7.6□□□□□ -1.19
LRRC28-216ENST00000559819 ATP6V0BQ99437 205 aa7.6□□□□□ -1.19
LRRC28-216ENST00000559819 A1L4Q6 167 aa7.6□□□□□ -1.19
LRRC28-216ENST00000559819 MSMBP08118 114 aa7.6□□□□□ -1.19
LRRC28-216ENST00000559819 SMIM17P0DL12 118 aa7.6□□□□□ -1.19
LRRC28-216ENST00000559819 ANXA2RQ3ZCQ2 193 aa7.6□□□□□ -1.19
LRRC28-216ENST00000559819 WFDC12Q8WWY7 111 aa7.6□□□□□ -1.19
LRRC28-216ENST00000559819 NAA38Q9BRA0 125 aaKnown RBP7.6□□□□□ -1.19
LRRC28-216ENST00000559819 RHPN1-AS1Q9BWJ2 59 aa7.6□□□□□ -1.19
LRRC28-216ENST00000559819 CFAP46Q8IYW2 2715 aa7.59□□□□□ -1.19
LRRC28-216ENST00000559819 GNRH2O43555 120 aa7.59□□□□□ -1.19
LRRC28-216ENST00000559819 GTSCR1Q86UQ5 136 aa7.59□□□□□ -1.19
LRRC28-216ENST00000559819 LINC00477Q96M19 166 aa7.59□□□□□ -1.19
LRRC28-216ENST00000559819 MAP1AP78559 2803 aaPredicted RBP7.59□□□□□ -1.19
LRRC28-216ENST00000559819 IGHV4-4A0A075B6R2 117 aa7.59□□□□□ -1.19
LRRC28-216ENST00000559819 OVOL1O14753 267 aa7.59□□□□□ -1.19
LRRC28-216ENST00000559819 C10orf99Q6UWK7 81 aa7.59□□□□□ -1.19
LRRC28-216ENST00000559819 USMG5Q96IX5 58 aa7.59□□□□□ -1.19
LRRC28-216ENST00000559819 HHLA3Q9XRX5 114 aa7.59□□□□□ -1.19
LRRC28-216ENST00000559819 CBY1Q9Y3M2 126 aa7.59□□□□□ -1.19
LRRC28-216ENST00000559819 S100A4P26447 101 aaKnown RBP7.58□□□□□ -1.2
LRRC28-216ENST00000559819 LAGE3Q14657 143 aa7.58□□□□□ -1.2
LRRC28-216ENST00000559819 ADAMTSL5Q6ZMM2 481 aa7.58□□□□□ -1.2
LRRC28-216ENST00000559819 C14orf178Q8N769 122 aaPredicted RBP7.58□□□□□ -1.2
LRRC28-216ENST00000559819 RPL39LQ96EH5 51 aaKnown RBP7.58□□□□□ -1.2
LRRC28-216ENST00000559819 ZMAT4Q9H898 229 aa7.58□□□□□ -1.2
LRRC28-216ENST00000559819 TRAV21A0A0B4J279 112 aa7.58□□□□□ -1.2
LRRC28-216ENST00000559819 NDUFS8O00217 210 aa7.58□□□□□ -1.2
LRRC28-216ENST00000559819 IGKCP01834 107 aa7.58□□□□□ -1.2
LRRC28-216ENST00000559819 LENEPQ9Y5L5 61 aa7.58□□□□□ -1.2
LRRC28-216ENST00000559819 TMEM8BA6NDV4 472 aa7.58□□□□□ -1.2
LRRC28-216ENST00000559819 H3BUA1 57 aa7.58□□□□□ -1.2
LRRC28-216ENST00000559819 IGLV1-40P01703 118 aa7.58□□□□□ -1.2
LRRC28-216ENST00000559819 MGPP08493 103 aa7.58□□□□□ -1.2
LRRC28-216ENST00000559819 TMEM160Q9NX00 188 aa7.58□□□□□ -1.2
LRRC28-216ENST00000559819 MRPL35Q9NZE8 188 aaKnown RBP7.58□□□□□ -1.2
LRRC28-216ENST00000559819 CSMD2Q7Z408 3487 aa7.57□□□□□ -1.2
LRRC28-216ENST00000559819 ASIPP42127 132 aa7.57□□□□□ -1.2
LRRC28-216ENST00000559819 HSD52Q0P140 79 aa7.57□□□□□ -1.2
LRRC28-216ENST00000559819 OR9G4Q8NGQ1 327 aa7.57□□□□□ -1.2
LRRC28-216ENST00000559819 RASL10AQ92737 203 aa7.57□□□□□ -1.2
LRRC28-216ENST00000559819 FAM19A4Q96LR4 140 aa7.57□□□□□ -1.2
LRRC28-216ENST00000559819 JMJD8Q96S16 334 aa7.57□□□□□ -1.2
LRRC28-216ENST00000559819 K7EP13 123 aa7.57□□□□□ -1.2
LRRC28-216ENST00000559819 SEC11AP67812 179 aa7.57□□□□□ -1.2
LRRC28-216ENST00000559819 CFHR3Q02985 330 aa7.57□□□□□ -1.2
LRRC28-216ENST00000559819 ZC2HC1BQ5TFG8 222 aa7.57□□□□□ -1.2
LRRC28-216ENST00000559819 MAPK1IP1LQ8NDC0 245 aa7.57□□□□□ -1.2
LRRC28-216ENST00000559819 RAB37Q96AX2 223 aa7.57□□□□□ -1.2
LRRC28-216ENST00000559819 SMIM2Q9BVW6 85 aa7.57□□□□□ -1.2
LRRC28-216ENST00000559819 PHLDA3Q9Y5J5 127 aa7.57□□□□□ -1.2
LRRC28-216ENST00000559819 DPM2O94777 84 aa7.56□□□□□ -1.2
LRRC28-216ENST00000559819 IGHV4-59P01825 116 aa7.56□□□□□ -1.2
LRRC28-216ENST00000559819 MYOZ3Q8TDC0 251 aa7.56□□□□□ -1.2
LRRC28-216ENST00000559819 DEFB104AQ8WTQ1 72 aa7.56□□□□□ -1.2
LRRC28-216ENST00000559819 PEF1Q9UBV8 284 aaKnown RBP7.56□□□□□ -1.2
LRRC28-216ENST00000559819 FLNCQ14315 2725 aa7.56□□□□□ -1.2
LRRC28-216ENST00000559819 ATP5LO75964 103 aa7.56□□□□□ -1.2
LRRC28-216ENST00000559819 BRI3O95415 125 aa7.56□□□□□ -1.2
LRRC28-216ENST00000559819 SRSF1Q07955 248 aaKnown RBP eCLIP7.56□□□□□ -1.2
LRRC28-216ENST00000559819 COTL1Q14019 142 aa7.56□□□□□ -1.2
LRRC28-216ENST00000559819 DEFB112Q30KQ8 113 aa7.56□□□□□ -1.2
LRRC28-216ENST00000559819 MRAP2Q96G30 205 aa7.56□□□□□ -1.2
LRRC28-216ENST00000559819 CELSR2Q9HCU4 2923 aa7.56□□□□□ -1.2
LRRC28-216ENST00000559819 DAZ1Q9NQZ3 744 aaKnown RBP7.56□□□□□ -1.2
LRRC28-216ENST00000559819 SMPXQ9UHP9 88 aa7.56□□□□□ -1.2
LRRC28-216ENST00000559819 UTP20O75691 2785 aaKnown RBP7.55□□□□□ -1.2
LRRC28-216ENST00000559819 RNF223E7ERA6 249 aa7.55□□□□□ -1.2
LRRC28-216ENST00000559819 SIVA1O15304 175 aa7.55□□□□□ -1.2
LRRC28-216ENST00000559819 RNASE3P12724 160 aaKnown RBP7.55□□□□□ -1.2
LRRC28-216ENST00000559819 NEGR1Q7Z3B1 354 aa7.55□□□□□ -1.2
LRRC28-216ENST00000559819 USP9XQ93008 2570 aaPredicted RBP7.55□□□□□ -1.2
LRRC28-216ENST00000559819 A0A0G2JLM5 398 aa7.55□□□□□ -1.2
LRRC28-216ENST00000559819 DPH3P1Q9H4G8 78 aa7.55□□□□□ -1.2
LRRC28-216ENST00000559819 B4DSR2 109 aa7.54□□□□□ -1.2
LRRC28-216ENST00000559819 H3BUT2 72 aa7.54□□□□□ -1.2
LRRC28-216ENST00000559819 K7EMI3 77 aa7.54□□□□□ -1.2
LRRC28-216ENST00000559819 SUMO2P61956 95 aaKnown RBP7.54□□□□□ -1.2
LRRC28-216ENST00000559819 JPT2Q9H910 190 aa7.54□□□□□ -1.2
LRRC28-216ENST00000559819 A6NDN8 102 aa7.54□□□□□ -1.2
LRRC28-216ENST00000559819 H3BRM9 83 aa7.54□□□□□ -1.2
LRRC28-216ENST00000559819 GCSHP23434 173 aa7.54□□□□□ -1.2
LRRC28-216ENST00000559819 APRG1Q8IVJ8 170 aa7.54□□□□□ -1.2
LRRC28-216ENST00000559819 MAPKAPK5-AS1Q8N8E1 139 aa7.54□□□□□ -1.2
LRRC28-216ENST00000559819 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.54□□□□□ -1.27e-8■■■□□ 16.4
LRRC28-216ENST00000559819 CSPG4Q6UVK1 2322 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms