RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 NAT8Q9UHE5 227 aa6.26□□□□□ -1.41
LRRC28-215ENST00000559774 DNAH9Q9NYC9 4486 aa6.26□□□□□ -1.41
LRRC28-215ENST00000559774 IGHV4-28A0A0C4DH34 117 aa6.25□□□□□ -1.41
LRRC28-215ENST00000559774 XKRY2A2RUG3 117 aa6.25□□□□□ -1.41
LRRC28-215ENST00000559774 C19orf71A6NCJ1 209 aa6.25□□□□□ -1.41
LRRC28-215ENST00000559774 ZNF705GA8MUZ8 300 aaPredicted RBP6.25□□□□□ -1.41
LRRC28-215ENST00000559774 SH2D1AO60880 128 aa6.25□□□□□ -1.41
LRRC28-215ENST00000559774 SFTA3P0C7M3 94 aa6.25□□□□□ -1.41
LRRC28-215ENST00000559774 CEBPGP53567 150 aa6.25□□□□□ -1.41
LRRC28-215ENST00000559774 RPS20P60866 119 aaKnown RBP6.25□□□□□ -1.41
LRRC28-215ENST00000559774 LINC01551Q86U37 167 aa6.25□□□□□ -1.41
LRRC28-215ENST00000559774 IL17DQ8TAD2 202 aa6.25□□□□□ -1.41
LRRC28-215ENST00000559774 NDUFAF3Q9BU61 184 aa6.25□□□□□ -1.41
LRRC28-215ENST00000559774 TIMM8BQ9Y5J9 83 aaPredicted RBP6.25□□□□□ -1.41
LRRC28-215ENST00000559774 COL7A1Q02388 2944 aa6.24□□□□□ -1.41
LRRC28-215ENST00000559774 PLAC8L1A1L4L8 177 aa6.24□□□□□ -1.41
LRRC28-215ENST00000559774 TMEM218A2RU14 115 aa6.24□□□□□ -1.41
LRRC28-215ENST00000559774 SNURFLB1AK76 121 aa6.24□□□□□ -1.41
LRRC28-215ENST00000559774 B4DEV8 164 aa6.24□□□□□ -1.41
LRRC28-215ENST00000559774 KRBOX1C9JBD0 128 aa6.24□□□□□ -1.41
LRRC28-215ENST00000559774 P01737 135 aa6.24□□□□□ -1.41
LRRC28-215ENST00000559774 ORM1P02763 201 aa6.24□□□□□ -1.41
LRRC28-215ENST00000559774 SPART-AS1P0CW21 52 aa6.24□□□□□ -1.41
LRRC28-215ENST00000559774 MGST1P10620 155 aaKnown RBP6.24□□□□□ -1.41
LRRC28-215ENST00000559774 TCL1AP56279 114 aa6.24□□□□□ -1.41
LRRC28-215ENST00000559774 ZNF415Q09FC8 603 aa6.24□□□□□ -1.41
LRRC28-215ENST00000559774 PNRC1Q12796 327 aaPredicted RBP6.24□□□□□ -1.41
LRRC28-215ENST00000559774 NDUFA5Q16718 116 aa6.24□□□□□ -1.41
LRRC28-215ENST00000559774 LGALS9BQ3B8N2 356 aa6.24□□□□□ -1.41
LRRC28-215ENST00000559774 PIK3CD-AS1Q5SR53 167 aa6.24□□□□□ -1.41
LRRC28-215ENST00000559774 COMMD7Q86VX2 200 aa6.24□□□□□ -1.41
LRRC28-215ENST00000559774 NHLRC2Q8NBF2 726 aa6.24□□□□□ -1.41
LRRC28-215ENST00000559774 C11orf72Q8NBR9 251 aa6.24□□□□□ -1.41
LRRC28-215ENST00000559774 PTH2Q96A98 100 aa6.24□□□□□ -1.41
LRRC28-215ENST00000559774 C11orf21Q9P2W6 132 aa6.24□□□□□ -1.41
LRRC28-215ENST00000559774 IGKV3D-20A0A0C4DH25 116 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 IGHV3-16A0A0C4DH30 117 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 A0A0J9YWU9 116 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 K7EN84 100 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 TYMSP04818 313 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 MED14OSP0DP75 135 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 HTN1P15515 57 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 AZU1P20160 251 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 ASIPP42127 132 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 CT83Q5H943 113 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 MUC21Q5SSG8 566 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 PRR27Q6MZM9 219 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 Q6ZQT7 251 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 C18orf15Q96N68 181 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 SEC11CQ9BY50 192 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 EDA2RQ9HAV5 297 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 OSTCQ9NRP0 149 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 IL36BQ9NZH7 164 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 DKK2Q9UBU2 259 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 NAGKQ9UJ70 344 aa6.23□□□□□ -1.41
LRRC28-215ENST00000559774 HUWE1Q7Z6Z7 4374 aaKnown RBP6.22□□□□□ -1.41
LRRC28-215ENST00000559774 FAM231BA6NCW3 169 aa6.22□□□□□ -1.41
LRRC28-215ENST00000559774 CXorf65A6NEN9 183 aa6.22□□□□□ -1.41
LRRC28-215ENST00000559774 PGPEP1LA6NFU8 196 aa6.22□□□□□ -1.41
LRRC28-215ENST00000559774 GNRH2O43555 120 aa6.22□□□□□ -1.41
LRRC28-215ENST00000559774 S100A4P26447 101 aaKnown RBP6.22□□□□□ -1.41
LRRC28-215ENST00000559774 RPL23P62829 140 aaKnown RBP6.22□□□□□ -1.41
LRRC28-215ENST00000559774 OR5I1Q13606 314 aa6.22□□□□□ -1.41
LRRC28-215ENST00000559774 LINC00612Q8N6U2 182 aa6.22□□□□□ -1.41
LRRC28-215ENST00000559774 C15orf54Q8N8G6 183 aa6.22□□□□□ -1.41
LRRC28-215ENST00000559774 NUDT10Q8NFP7 164 aa6.22□□□□□ -1.41
LRRC28-215ENST00000559774 RASL10AQ92737 203 aa6.22□□□□□ -1.41
LRRC28-215ENST00000559774 ISOC2Q96AB3 205 aa6.22□□□□□ -1.41
LRRC28-215ENST00000559774 NUDT11Q96G61 164 aa6.22□□□□□ -1.41
LRRC28-215ENST00000559774 C9orf85Q96MD7 179 aa6.22□□□□□ -1.41
LRRC28-215ENST00000559774 SSBP4Q9BWG4 385 aaPredicted RBP6.22□□□□□ -1.41
LRRC28-215ENST00000559774 A0A1W2PPQ1 181 aa6.21□□□□□ -1.42
LRRC28-215ENST00000559774 A8MWL6 223 aa6.21□□□□□ -1.42
LRRC28-215ENST00000559774 F2Z2F3 143 aa6.21□□□□□ -1.42
LRRC28-215ENST00000559774 M0R2P5 195 aa6.21□□□□□ -1.42
LRRC28-215ENST00000559774 PPP1R2P9O14990 202 aa6.21□□□□□ -1.42
LRRC28-215ENST00000559774 CIDEAO60543 219 aa6.21□□□□□ -1.42
LRRC28-215ENST00000559774 SPINK4O60575 86 aa6.21□□□□□ -1.42
LRRC28-215ENST00000559774 OR5AL1P0C617 328 aa6.21□□□□□ -1.42
LRRC28-215ENST00000559774 FOXA3P55318 350 aaPredicted RBP6.21□□□□□ -1.42
LRRC28-215ENST00000559774 ERVFC1-1P60608 527 aa6.21□□□□□ -1.42
LRRC28-215ENST00000559774 C10orf91Q5T1B1 145 aa6.21□□□□□ -1.42
LRRC28-215ENST00000559774 ZNF575Q86XF7 245 aa6.21□□□□□ -1.42
LRRC28-215ENST00000559774 OR2D3Q8NGH3 330 aa6.21□□□□□ -1.42
LRRC28-215ENST00000559774 C11orf45Q8TAV5 145 aa6.21□□□□□ -1.42
LRRC28-215ENST00000559774 SFRP2Q96HF1 295 aa6.21□□□□□ -1.42
LRRC28-215ENST00000559774 GFRA4Q9GZZ7 299 aa6.21□□□□□ -1.42
LRRC28-215ENST00000559774 RPP21Q9H633 154 aaKnown RBP6.21□□□□□ -1.42
LRRC28-215ENST00000559774 SCRT2Q9NQ03 307 aa6.21□□□□□ -1.42
LRRC28-215ENST00000559774 GSN-AS1Q9NRJ2 163 aa6.21□□□□□ -1.42
LRRC28-215ENST00000559774 MDFICQ9P1T7 246 aa6.21□□□□□ -1.42
LRRC28-215ENST00000559774 STAB2Q8WWQ8 2551 aa6.2□□□□□ -1.42
LRRC28-215ENST00000559774 TENM3Q9P273 2699 aa6.2□□□□□ -1.42
LRRC28-215ENST00000559774 F8W036 122 aa6.2□□□□□ -1.42
LRRC28-215ENST00000559774 M0R036 132 aa6.2□□□□□ -1.42
LRRC28-215ENST00000559774 SNAI2O43623 268 aa6.2□□□□□ -1.42
LRRC28-215ENST00000559774 GATCO43716 136 aaKnown RBP6.2□□□□□ -1.42
LRRC28-215ENST00000559774 PRM2P04554 102 aa6.2□□□□□ -1.42
LRRC28-215ENST00000559774 RNASE3P12724 160 aaKnown RBP6.2□□□□□ -1.42
LRRC28-215ENST00000559774 EMP1P54849 157 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms