RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 A0A1W2PRE2 83 aa8.74□□□□□ -1.01
LRRC28-214ENST00000559433 FGF8P55075 233 aaPredicted RBP8.74□□□□□ -1.01
LRRC28-214ENST00000559433 UBE2G2P60604 165 aa8.74□□□□□ -1.01
LRRC28-214ENST00000559433 TDRG1Q3Y452 100 aa8.74□□□□□ -1.01
LRRC28-214ENST00000559433 CYB561D1Q8N8Q1 229 aa8.74□□□□□ -1.01
LRRC28-214ENST00000559433 TMEM75Q8N9X5 138 aa8.74□□□□□ -1.01
LRRC28-214ENST00000559433 C8orf49Q96NF6 230 aa8.74□□□□□ -1.01
LRRC28-214ENST00000559433 SPXQ9BT56 116 aa8.74□□□□□ -1.01
LRRC28-214ENST00000559433 Q9H8V8 135 aa8.74□□□□□ -1.01
LRRC28-214ENST00000559433 SDF2L1Q9HCN8 221 aa8.74□□□□□ -1.01
LRRC28-214ENST00000559433 PSG8Q9UQ74 426 aa8.74□□□□□ -1.01
LRRC28-214ENST00000559433 MAP1LC3B2A6NCE7 125 aa8.73□□□□□ -1.01
LRRC28-214ENST00000559433 PAX4O43316 350 aa8.73□□□□□ -1.01
LRRC28-214ENST00000559433 GNRH2O43555 120 aa8.73□□□□□ -1.01
LRRC28-214ENST00000559433 TYMSP04818 313 aa8.73□□□□□ -1.01
LRRC28-214ENST00000559433 FLI1Q01543 452 aaPredicted RBP8.73□□□□□ -1.01
LRRC28-214ENST00000559433 ZNF345Q14585 488 aa8.73□□□□□ -1.01
LRRC28-214ENST00000559433 ZFP69Q49AA0 526 aa8.73□□□□□ -1.01
LRRC28-214ENST00000559433 PRNTQ86SH4 94 aa8.73□□□□□ -1.01
LRRC28-214ENST00000559433 KCNRGQ8N5I3 272 aa8.73□□□□□ -1.01
LRRC28-214ENST00000559433 KCNS1Q96KK3 526 aa8.73□□□□□ -1.01
LRRC28-214ENST00000559433 MAP1LC3BQ9GZQ8 125 aa8.73□□□□□ -1.01
LRRC28-214ENST00000559433 A0A096LPF7 62 aa8.72□□□□□ -1.01
LRRC28-214ENST00000559433 TRGV4A0A0C4DH28 118 aa8.72□□□□□ -1.01
LRRC28-214ENST00000559433 IGHV3-16A0A0C4DH30 117 aa8.72□□□□□ -1.01
LRRC28-214ENST00000559433 FBLL1A6NHQ2 334 aaKnown RBP8.72□□□□□ -1.01
LRRC28-214ENST00000559433 GCGP01275 180 aa8.72□□□□□ -1.01
LRRC28-214ENST00000559433 IFNA7P01567 189 aa8.72□□□□□ -1.01
LRRC28-214ENST00000559433 IGLV2-11P01706 119 aa8.72□□□□□ -1.01
LRRC28-214ENST00000559433 ESRGQ1W209 222 aa8.72□□□□□ -1.01
LRRC28-214ENST00000559433 TTC32Q5I0X7 151 aa8.72□□□□□ -1.01
LRRC28-214ENST00000559433 OR11H4Q8NGC9 324 aa8.72□□□□□ -1.01
LRRC28-214ENST00000559433 RASL10AQ92737 203 aa8.72□□□□□ -1.01
LRRC28-214ENST00000559433 PRO0255Q9UI72 69 aa8.72□□□□□ -1.01
LRRC28-214ENST00000559433 HHLA3Q9XRX5 114 aa8.72□□□□□ -1.01
LRRC28-214ENST00000559433 ICOSQ9Y6W8 199 aa8.72□□□□□ -1.01
LRRC28-214ENST00000559433 TRAV34A0A0B4J273 112 aa8.71□□□□□ -1.02
LRRC28-214ENST00000559433 KANTRA0A1W2PQU2 76 aa8.71□□□□□ -1.02
LRRC28-214ENST00000559433 FAM74A7A6NL05 159 aa8.71□□□□□ -1.02
LRRC28-214ENST00000559433 M0R2P5 195 aa8.71□□□□□ -1.02
LRRC28-214ENST00000559433 PFN1P07737 140 aaKnown RBP8.71□□□□□ -1.02
LRRC28-214ENST00000559433 SFTA3P0C7M3 94 aa8.71□□□□□ -1.02
LRRC28-214ENST00000559433 PPT1P50897 306 aa8.71□□□□□ -1.02
LRRC28-214ENST00000559433 ZNF80P51504 273 aaPredicted RBP8.71□□□□□ -1.02
LRRC28-214ENST00000559433 FHL2Q14192 279 aa8.71□□□□□ -1.02
LRRC28-214ENST00000559433 SMUG1Q53HV7 270 aa8.71□□□□□ -1.02
LRRC28-214ENST00000559433 C6orf223Q8N319 242 aa8.71□□□□□ -1.02
LRRC28-214ENST00000559433 MRPS16Q9Y3D3 137 aaKnown RBP8.71□□□□□ -1.02
LRRC28-214ENST00000559433 A0A0D9SG52 128 aa8.7□□□□□ -1.02
LRRC28-214ENST00000559433 A0A1B0GVY2 172 aa8.7□□□□□ -1.02
LRRC28-214ENST00000559433 HMSDA8MTL9 139 aa8.7□□□□□ -1.02
LRRC28-214ENST00000559433 PEX7O00628 323 aa8.7□□□□□ -1.02
LRRC28-214ENST00000559433 CRYBA4P53673 196 aa8.7□□□□□ -1.02
LRRC28-214ENST00000559433 SAPCD1Q5SSQ6 148 aa8.7□□□□□ -1.02
LRRC28-214ENST00000559433 STOML3Q8TAV4 291 aa8.7□□□□□ -1.02
LRRC28-214ENST00000559433 PCNPQ8WW12 178 aaKnown RBP8.7□□□□□ -1.02
LRRC28-214ENST00000559433 ZNF479Q96JC4 524 aa8.7□□□□□ -1.02
LRRC28-214ENST00000559433 LINC00479Q96M42 142 aa8.7□□□□□ -1.02
LRRC28-214ENST00000559433 UPK3BQ9BT76 320 aa8.7□□□□□ -1.02
LRRC28-214ENST00000559433 ZNF471Q9BX82 626 aaPredicted RBP8.7□□□□□ -1.02
LRRC28-214ENST00000559433 NKX6-2Q9C056 277 aaPredicted RBP8.7□□□□□ -1.02
LRRC28-214ENST00000559433 TRAV4A0A0B4J268 109 aa8.69□□□□□ -1.02
LRRC28-214ENST00000559433 BCL2L11O43521 198 aa8.69□□□□□ -1.02
LRRC28-214ENST00000559433 FHITP49789 147 aa8.69□□□□□ -1.02
LRRC28-214ENST00000559433 MRPL23Q16540 153 aaKnown RBP8.69□□□□□ -1.02
LRRC28-214ENST00000559433 Q86TA4 180 aa8.69□□□□□ -1.02
LRRC28-214ENST00000559433 OR4C5Q8NGB2 326 aa8.69□□□□□ -1.02
LRRC28-214ENST00000559433 FAM213BQ8TBF2 198 aa8.69□□□□□ -1.02
LRRC28-214ENST00000559433 C11orf21Q9P2W6 132 aa8.69□□□□□ -1.02
LRRC28-214ENST00000559433 ARL2-SNX15V9GYD0 113 aa8.69□□□□□ -1.02
LRRC28-214ENST00000559433 PFDN1O60925 122 aa8.68□□□□□ -1.02
LRRC28-214ENST00000559433 SEC11BP0C7V7 166 aa8.68□□□□□ -1.02
LRRC28-214ENST00000559433 CST9LP1Q5W188 147 aa8.68□□□□□ -1.02
LRRC28-214ENST00000559433 HIST1H2BAQ96A08 127 aa8.68□□□□□ -1.02
LRRC28-214ENST00000559433 PKHD1P08F94 4074 aa8.68□□□□□ -1.02
LRRC28-214ENST00000559433 PKD1P98161 4303 aa8.67□□□□□ -1.02
LRRC28-214ENST00000559433 UMAD1C9J7I0 102 aa8.67□□□□□ -1.02
LRRC28-214ENST00000559433 C9JCJ5 164 aa8.67□□□□□ -1.02
LRRC28-214ENST00000559433 GYPEP15421 78 aa8.67□□□□□ -1.02
LRRC28-214ENST00000559433 EIF5AP63241 154 aaKnown RBP8.67□□□□□ -1.02
LRRC28-214ENST00000559433 A0A1B0GV50 99 aa8.66□□□□□ -1.02
LRRC28-214ENST00000559433 A0A1W2PPQ1 181 aa8.66□□□□□ -1.02
LRRC28-214ENST00000559433 K7EQD1 137 aa8.66□□□□□ -1.02
LRRC28-214ENST00000559433 NXPH4O95158 308 aa8.66□□□□□ -1.02
LRRC28-214ENST00000559433 ORM1P02763 201 aa8.66□□□□□ -1.02
LRRC28-214ENST00000559433 SRIP30626 198 aa8.66□□□□□ -1.02
LRRC28-214ENST00000559433 UBE2G1P62253 170 aa8.66□□□□□ -1.02
LRRC28-214ENST00000559433 ZNF876PQ49A33 203 aa8.66□□□□□ -1.02
LRRC28-214ENST00000559433 TMUB2Q71RG4 321 aa8.66□□□□□ -1.02
LRRC28-214ENST00000559433 NEGR1Q7Z3B1 354 aa8.66□□□□□ -1.02
LRRC28-214ENST00000559433 SFT2D1Q8WV19 159 aa8.66□□□□□ -1.02
LRRC28-214ENST00000559433 FMC1Q96HJ9 113 aa8.66□□□□□ -1.02
LRRC28-214ENST00000559433 C9orf85Q96MD7 179 aa8.66□□□□□ -1.02
LRRC28-214ENST00000559433 TCEAL7Q9BRU2 100 aa8.66□□□□□ -1.02
LRRC28-214ENST00000559433 KRTAP1-5Q9BYS1 174 aa8.66□□□□□ -1.02
LRRC28-214ENST00000559433 TRAV9-2A0A087WT02 112 aa8.65□□□□□ -1.02
LRRC28-214ENST00000559433 FABP5P3A8MUU1 101 aa8.65□□□□□ -1.02
LRRC28-214ENST00000559433 SIVA1O15304 175 aa8.65□□□□□ -1.02
LRRC28-214ENST00000559433 PAGE4O60829 102 aa8.65□□□□□ -1.02
LRRC28-214ENST00000559433 MED14OSP0DP75 135 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms