RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 LINC01587Q99440 93 aa10.63□□□□□ -0.71
SNRPA1-207ENST00000559309 EDA2RQ9HAV5 297 aa10.63□□□□□ -0.71
SNRPA1-207ENST00000559309 ZNF727A8MUV8 499 aa10.62□□□□□ -0.71
SNRPA1-207ENST00000559309 SFTA3P0C7M3 94 aa10.62□□□□□ -0.71
SNRPA1-207ENST00000559309 C10orf91Q5T1B1 145 aa10.62□□□□□ -0.71
SNRPA1-207ENST00000559309 IBA57Q5T440 356 aaKnown RBP10.62□□□□□ -0.71
SNRPA1-207ENST00000559309 FAM231DQ6ZW35 169 aa10.62□□□□□ -0.71
SNRPA1-207ENST00000559309 TMEM218A2RU14 115 aa10.61□□□□□ -0.71
SNRPA1-207ENST00000559309 ZNF705GA8MUZ8 300 aaPredicted RBP10.61□□□□□ -0.71
SNRPA1-207ENST00000559309 KRBOX1C9JBD0 128 aa10.61□□□□□ -0.71
SNRPA1-207ENST00000559309 CXCL1P09341 107 aa10.61□□□□□ -0.71
SNRPA1-207ENST00000559309 ADCYAP1P18509 176 aa10.61□□□□□ -0.71
SNRPA1-207ENST00000559309 RRN3P1Q2M238 152 aa10.61□□□□□ -0.71
SNRPA1-207ENST00000559309 SOHLH1Q5JUK2 328 aa10.61□□□□□ -0.71
SNRPA1-207ENST00000559309 KCNS1Q96KK3 526 aa10.61□□□□□ -0.71
SNRPA1-207ENST00000559309 TMEM208Q9BTX3 173 aa10.61□□□□□ -0.71
SNRPA1-207ENST00000559309 SDF2L1Q9HCN8 221 aa10.61□□□□□ -0.71
SNRPA1-207ENST00000559309 NAT8Q9UHE5 227 aa10.61□□□□□ -0.71
SNRPA1-207ENST00000559309 IGHV3OR16-12A0A075B7B8 117 aa10.6□□□□□ -0.71
SNRPA1-207ENST00000559309 TYMSP04818 313 aa10.6□□□□□ -0.71
SNRPA1-207ENST00000559309 RPL23P62829 140 aaKnown RBP10.6□□□□□ -0.71
SNRPA1-207ENST00000559309 TMEM241Q24JQ0 296 aa10.6□□□□□ -0.71
SNRPA1-207ENST00000559309 FAM159AQ6UWV7 190 aa10.6□□□□□ -0.71
SNRPA1-207ENST00000559309 LINC00612Q8N6U2 182 aa10.6□□□□□ -0.71
SNRPA1-207ENST00000559309 C16orf74Q96GX8 76 aa10.6□□□□□ -0.71
SNRPA1-207ENST00000559309 BIN3Q9NQY0 253 aa10.6□□□□□ -0.71
SNRPA1-207ENST00000559309 U3KQK5 164 aa10.6□□□□□ -0.71
SNRPA1-207ENST00000559309 IGHV3-16A0A0C4DH30 117 aa10.59□□□□□ -0.71
SNRPA1-207ENST00000559309 TMEM189A5PLL7 270 aa10.59□□□□□ -0.71
SNRPA1-207ENST00000559309 DAZ2Q13117 558 aaKnown RBP10.59□□□□□ -0.71
SNRPA1-207ENST00000559309 OR5I1Q13606 314 aa10.59□□□□□ -0.71
SNRPA1-207ENST00000559309 MUC21Q5SSG8 566 aa10.59□□□□□ -0.71
SNRPA1-207ENST00000559309 NUDT10Q8NFP7 164 aa10.59□□□□□ -0.71
SNRPA1-207ENST00000559309 NUDT11Q96G61 164 aa10.59□□□□□ -0.71
SNRPA1-207ENST00000559309 CSMD3Q7Z407 3707 aa10.58□□□□□ -0.72
SNRPA1-207ENST00000559309 GNRH2O43555 120 aa10.58□□□□□ -0.72
SNRPA1-207ENST00000559309 RNASE3P12724 160 aaKnown RBP10.58□□□□□ -0.72
SNRPA1-207ENST00000559309 CEBPGP53567 150 aa10.58□□□□□ -0.72
SNRPA1-207ENST00000559309 TCL1AP56279 114 aa10.58□□□□□ -0.72
SNRPA1-207ENST00000559309 ISOC2Q96AB3 205 aa10.58□□□□□ -0.72
SNRPA1-207ENST00000559309 C9orf85Q96MD7 179 aa10.58□□□□□ -0.72
SNRPA1-207ENST00000559309 SEC11CQ9BY50 192 aa10.58□□□□□ -0.72
SNRPA1-207ENST00000559309 SCRT2Q9NQ03 307 aa10.58□□□□□ -0.72
SNRPA1-207ENST00000559309 MDFICQ9P1T7 246 aa10.58□□□□□ -0.72
SNRPA1-207ENST00000559309 TRGV11A0A075B6L2 103 aa10.57□□□□□ -0.72
SNRPA1-207ENST00000559309 A0A0J9YWU9 116 aa10.57□□□□□ -0.72
SNRPA1-207ENST00000559309 MGST1P10620 155 aaKnown RBP10.57□□□□□ -0.72
SNRPA1-207ENST00000559309 PTH2Q96A98 100 aa10.57□□□□□ -0.72
SNRPA1-207ENST00000559309 SSBP4Q9BWG4 385 aaPredicted RBP10.57□□□□□ -0.72
SNRPA1-207ENST00000559309 OSTCQ9NRP0 149 aa10.57□□□□□ -0.72
SNRPA1-207ENST00000559309 DKK2Q9UBU2 259 aa10.57□□□□□ -0.72
SNRPA1-207ENST00000559309 CBY3A6NI87 242 aa10.56□□□□□ -0.72
SNRPA1-207ENST00000559309 B4DEV8 164 aa10.56□□□□□ -0.72
SNRPA1-207ENST00000559309 CT83Q5H943 113 aa10.56□□□□□ -0.72
SNRPA1-207ENST00000559309 PRR27Q6MZM9 219 aa10.56□□□□□ -0.72
SNRPA1-207ENST00000559309 C18orf15Q96N68 181 aa10.56□□□□□ -0.72
SNRPA1-207ENST00000559309 GSN-AS1Q9NRJ2 163 aa10.56□□□□□ -0.72
SNRPA1-207ENST00000559309 IL36BQ9NZH7 164 aa10.56□□□□□ -0.72
SNRPA1-207ENST00000559309 CARHSP1Q9Y2V2 147 aaKnown RBP10.56□□□□□ -0.72
SNRPA1-207ENST00000559309 MUC4Q99102 2169 aa10.56□□□□□ -0.72
SNRPA1-207ENST00000559309 LYRM9A8MSI8 78 aa10.55□□□□□ -0.72
SNRPA1-207ENST00000559309 SPINK4O60575 86 aa10.55□□□□□ -0.72
SNRPA1-207ENST00000559309 ORM1P02763 201 aa10.55□□□□□ -0.72
SNRPA1-207ENST00000559309 IGLC6P0CF74 106 aa10.55□□□□□ -0.72
SNRPA1-207ENST00000559309 MED14OSP0DP75 135 aa10.55□□□□□ -0.72
SNRPA1-207ENST00000559309 RPL19P84098 196 aaKnown RBP10.55□□□□□ -0.72
SNRPA1-207ENST00000559309 PNRC1Q12796 327 aaPredicted RBP10.55□□□□□ -0.72
SNRPA1-207ENST00000559309 SPXQ9BT56 116 aa10.55□□□□□ -0.72
SNRPA1-207ENST00000559309 RNASE7Q9H1E1 156 aaKnown RBP10.55□□□□□ -0.72
SNRPA1-207ENST00000559309 CELA1Q9UNI1 258 aa10.55□□□□□ -0.72
SNRPA1-207ENST00000559309 DEFB4AO15263 64 aa10.54□□□□□ -0.72
SNRPA1-207ENST00000559309 SNAI2O43623 268 aa10.54□□□□□ -0.72
SNRPA1-207ENST00000559309 HTN1P15515 57 aa10.54□□□□□ -0.72
SNRPA1-207ENST00000559309 FOXA3P55318 350 aaPredicted RBP10.54□□□□□ -0.72
SNRPA1-207ENST00000559309 ZNF415Q09FC8 603 aa10.54□□□□□ -0.72
SNRPA1-207ENST00000559309 LGALS9BQ3B8N2 356 aa10.54□□□□□ -0.72
SNRPA1-207ENST00000559309 PIK3CD-AS1Q5SR53 167 aa10.54□□□□□ -0.72
SNRPA1-207ENST00000559309 NAGKQ9UJ70 344 aa10.54□□□□□ -0.72
SNRPA1-207ENST00000559309 TIMM8BQ9Y5J9 83 aaPredicted RBP10.54□□□□□ -0.72
SNRPA1-207ENST00000559309 V9GYV3 84 aa10.54□□□□□ -0.72
SNRPA1-207ENST00000559309 M0R036 132 aa10.53□□□□□ -0.72
SNRPA1-207ENST00000559309 P01737 135 aa10.53□□□□□ -0.72
SNRPA1-207ENST00000559309 OR5AL1P0C617 328 aa10.53□□□□□ -0.72
SNRPA1-207ENST00000559309 FAM222AQ5U5X8 452 aa10.53□□□□□ -0.72
SNRPA1-207ENST00000559309 RASL10AQ92737 203 aa10.53□□□□□ -0.72
SNRPA1-207ENST00000559309 WWC2-AS2Q96NR7 200 aa10.53□□□□□ -0.72
SNRPA1-207ENST00000559309 NDUFAF3Q9BU61 184 aa10.53□□□□□ -0.72
SNRPA1-207ENST00000559309 RPP21Q9H633 154 aaKnown RBP10.53□□□□□ -0.72
SNRPA1-207ENST00000559309 STARD9Q9P2P6 4700 aa10.53□□□□□ -0.72
SNRPA1-207ENST00000559309 TEX48A0A1B0GUV7 120 aa10.52□□□□□ -0.73
SNRPA1-207ENST00000559309 NXPH4O95158 308 aa10.52□□□□□ -0.73
SNRPA1-207ENST00000559309 RPS20P60866 119 aaKnown RBP10.52□□□□□ -0.73
SNRPA1-207ENST00000559309 NDUFA5Q16718 116 aa10.52□□□□□ -0.73
SNRPA1-207ENST00000559309 DAZAP1Q96EP5 407 aaKnown RBP10.52□□□□□ -0.73
SNRPA1-207ENST00000559309 SFRP2Q96HF1 295 aa10.52□□□□□ -0.73
SNRPA1-207ENST00000559309 CNFNQ9BYD5 112 aa10.52□□□□□ -0.73
SNRPA1-207ENST00000559309 NOP10Q9NPE3 64 aaKnown RBP10.52□□□□□ -0.73
SNRPA1-207ENST00000559309 GRIFINA4D1Z8 144 aa10.51□□□□□ -0.73
SNRPA1-207ENST00000559309 FAM231BA6NCW3 169 aa10.51□□□□□ -0.73
SNRPA1-207ENST00000559309 SNURFLB1AK76 121 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms