RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 E7EQL1 145 aa5.61□□□□□ -1.51
USP3-210ENST00000559192 IGLV2-23P01705 113 aa5.61□□□□□ -1.51
USP3-210ENST00000559192 LY6G5BQ8NDX9 201 aa5.61□□□□□ -1.51
USP3-210ENST00000559192 PEMTQ9UBM1 199 aa5.61□□□□□ -1.51
USP3-210ENST00000559192 PRSS33Q8NF86 280 aa5.61□□□□□ -1.51
USP3-210ENST00000559192 ITLN2Q8WWU7 325 aaPredicted RBP5.61□□□□□ -1.51
USP3-210ENST00000559192 DPH3P1Q9H4G8 78 aa5.61□□□□□ -1.51
USP3-210ENST00000559192 CTSZQ9UBR2 303 aa5.61□□□□□ -1.51
USP3-210ENST00000559192 CACNA1EQ15878 2313 aa5.6□□□□□ -1.51
USP3-210ENST00000559192 A0A087WWL8 130 aa5.6□□□□□ -1.51
USP3-210ENST00000559192 ZNF491Q8N8L2 437 aa5.6□□□□□ -1.51
USP3-210ENST00000559192 WFDC9Q8NEX5 89 aa5.6□□□□□ -1.51
USP3-210ENST00000559192 MBD6Q96DN6 1003 aa5.6□□□□□ -1.51
USP3-210ENST00000559192 IGKV1D-37A0A075B6S9 117 aa5.6□□□□□ -1.51
USP3-210ENST00000559192 PAX8Q06710 450 aa5.6□□□□□ -1.51
USP3-210ENST00000559192 WFDC2Q14508 124 aa5.6□□□□□ -1.51
USP3-210ENST00000559192 HLA-DRB4P13762 266 aa5.6□□□□□ -1.51
USP3-210ENST00000559192 C6orf226Q5I0X4 101 aa5.6□□□□□ -1.51
USP3-210ENST00000559192 BAALCQ8WXS3 180 aa5.6□□□□□ -1.51
USP3-210ENST00000559192 CFHR4Q92496 578 aa5.6□□□□□ -1.51
USP3-210ENST00000559192 HLA-DRB4X5D2U9 266 aa5.6□□□□□ -1.51
USP3-210ENST00000559192 IGHV3-73A0A0B4J1V6 119 aa5.6□□□□□ -1.51
USP3-210ENST00000559192 IGHG2P01859 326 aa5.6□□□□□ -1.51
USP3-210ENST00000559192 SP5Q6BEB4 398 aaPredicted RBP5.6□□□□□ -1.51
USP3-210ENST00000559192 RNF5Q99942 180 aa5.6□□□□□ -1.51
USP3-210ENST00000559192 A0A1W2PNU3 283 aaPredicted RBP5.59□□□□□ -1.51
USP3-210ENST00000559192 C19orf71A6NCJ1 209 aa5.59□□□□□ -1.51
USP3-210ENST00000559192 K7EM74 188 aa5.59□□□□□ -1.51
USP3-210ENST00000559192 C1orf159Q96HA4 380 aa5.59□□□□□ -1.51
USP3-210ENST00000559192 FAM215AQ9Y5M1 114 aa5.59□□□□□ -1.51
USP3-210ENST00000559192 DOCK10Q96BY6 2186 aa5.59□□□□□ -1.51
USP3-210ENST00000559192 CRLF1O75462 422 aa5.59□□□□□ -1.51
USP3-210ENST00000559192 HOXD3P31249 432 aaPredicted RBP5.59□□□□□ -1.51
USP3-210ENST00000559192 DYNAPQ8N1N2 210 aa5.59□□□□□ -1.51
USP3-210ENST00000559192 LINC00311Q8N616 119 aa5.59□□□□□ -1.51
USP3-210ENST00000559192 TRBV25-1A0A075B6N4 114 aa5.59□□□□□ -1.51
USP3-210ENST00000559192 NEU4Q8WWR8 484 aaPredicted RBP5.59□□□□□ -1.51
USP3-210ENST00000559192 DSCR8Q96T75 97 aa5.59□□□□□ -1.51
USP3-210ENST00000559192 SHISA9B4DS77 424 aa5.59□□□□□ -1.52
USP3-210ENST00000559192 IGLL5B9A064 214 aa5.59□□□□□ -1.52
USP3-210ENST00000559192 TEN1Q86WV5 123 aa5.59□□□□□ -1.52
USP3-210ENST00000559192 IGKV3D-7A0A0C4DH55 119 aa5.58□□□□□ -1.52
USP3-210ENST00000559192 FOXI1Q12951 378 aa5.58□□□□□ -1.52
USP3-210ENST00000559192 FOXI2Q6ZQN5 318 aa5.58□□□□□ -1.52
USP3-210ENST00000559192 TP53TG1Q9Y2A0 90 aa5.58□□□□□ -1.52
USP3-210ENST00000559192 TRGV11A0A075B6L2 103 aa5.58□□□□□ -1.52
USP3-210ENST00000559192 I3L2K1 104 aa5.58□□□□□ -1.52
USP3-210ENST00000559192 DAD1P61803 113 aa5.58□□□□□ -1.52
USP3-210ENST00000559192 C2orf66Q6UXQ4 117 aa5.58□□□□□ -1.52
USP3-210ENST00000559192 FREM1Q5H8C1 2179 aa5.58□□□□□ -1.52
USP3-210ENST00000559192 F6UB75 175 aa5.58□□□□□ -1.52
USP3-210ENST00000559192 THBDP07204 575 aa5.58□□□□□ -1.52
USP3-210ENST00000559192 TMEM190Q8WZ59 177 aa5.58□□□□□ -1.52
USP3-210ENST00000559192 TRAV25A0A0B4J276 109 aa5.58□□□□□ -1.52
USP3-210ENST00000559192 CFC1BP0CG36 223 aa5.58□□□□□ -1.52
USP3-210ENST00000559192 CFC1P0CG37 223 aa5.58□□□□□ -1.52
USP3-210ENST00000559192 HTN3P15516 51 aa5.58□□□□□ -1.52
USP3-210ENST00000559192 A0A087WX48 190 aa5.58□□□□□ -1.52
USP3-210ENST00000559192 PSMB8P28062 276 aa5.58□□□□□ -1.52
USP3-210ENST00000559192 CLUHP3Q96NS8 147 aa5.58□□□□□ -1.52
USP3-210ENST00000559192 NCKAP5O14513 1909 aa5.57□□□□□ -1.52
USP3-210ENST00000559192 COL5A1P20908 1838 aaPredicted RBP5.57□□□□□ -1.52
USP3-210ENST00000559192 ABCA1O95477 2261 aa5.57□□□□□ -1.52
USP3-210ENST00000559192 TRGV4A0A0C4DH28 118 aa5.57□□□□□ -1.52
USP3-210ENST00000559192 PRR30Q53SZ7 412 aaPredicted RBP5.57□□□□□ -1.52
USP3-210ENST00000559192 TRAV12-2A0A075B6T6 113 aa5.57□□□□□ -1.52
USP3-210ENST00000559192 G3V318 75 aa5.57□□□□□ -1.52
USP3-210ENST00000559192 OVOL1O14753 267 aa5.57□□□□□ -1.52
USP3-210ENST00000559192 ATP6V0E1O15342 81 aa5.57□□□□□ -1.52
USP3-210ENST00000559192 FOXE3Q13461 319 aa5.57□□□□□ -1.52
USP3-210ENST00000559192 A0A0B4J2C4 111 aa5.57□□□□□ -1.52
USP3-210ENST00000559192 hADV29S1A0JD25 119 aa5.57□□□□□ -1.52
USP3-210ENST00000559192 BAALC-AS2P0C853 105 aa5.57□□□□□ -1.52
USP3-210ENST00000559192 PRSS22Q9GZN4 317 aa5.57□□□□□ -1.52
USP3-210ENST00000559192 DKK4Q9UBT3 224 aa5.57□□□□□ -1.52
USP3-210ENST00000559192 IGKV1-17P01599 117 aa5.57□□□□□ -1.52
USP3-210ENST00000559192 WT1P19544 449 aaPredicted RBP5.57□□□□□ -1.52
USP3-210ENST00000559192 FAM240AA0A1B0GVK7 77 aa5.56□□□□□ -1.52
USP3-210ENST00000559192 TEX22C9J3V5 150 aa5.56□□□□□ -1.52
USP3-210ENST00000559192 K7EIM0 57 aa5.56□□□□□ -1.52
USP3-210ENST00000559192 CR1LQ2VPA4 569 aa5.56□□□□□ -1.52
USP3-210ENST00000559192 MPLKIPQ8TAP9 179 aa5.56□□□□□ -1.52
USP3-210ENST00000559192 C10orf142B7Z368 130 aa5.56□□□□□ -1.52
USP3-210ENST00000559192 MED12LQ86YW9 2145 aa5.56□□□□□ -1.52
USP3-210ENST00000559192 TNRC6AQ8NDV7 1962 aaKnown RBP5.56□□□□□ -1.52
USP3-210ENST00000559192 C1orf195Q5TG92 126 aa5.56□□□□□ -1.52
USP3-210ENST00000559192 NDUFA12Q9UI09 145 aa5.56□□□□□ -1.52
USP3-210ENST00000559192 AKAP6Q13023 2319 aa5.56□□□□□ -1.52
USP3-210ENST00000559192 F8VRH5 84 aa5.55□□□□□ -1.52
USP3-210ENST00000559192 DUSP14O95147 198 aaKnown RBP5.55□□□□□ -1.52
USP3-210ENST00000559192 NDUFV3P56181 108 aaKnown RBP5.55□□□□□ -1.52
USP3-210ENST00000559192 Q6ZS92 163 aa5.55□□□□□ -1.52
USP3-210ENST00000559192 MUSTN1Q8IVN3 82 aa5.55□□□□□ -1.52
USP3-210ENST00000559192 BRCA2P51587 3418 aa5.55□□□□□ -1.52
USP3-210ENST00000559192 DOPEY2Q9Y3R5 2298 aa5.55□□□□□ -1.52
USP3-210ENST00000559192 TRBV7-1A0A0A6YYK4 115 aa5.55□□□□□ -1.52
USP3-210ENST00000559192 BRD3OSQ6XYD6 125 aa5.55□□□□□ -1.52
USP3-210ENST00000559192 TMEM141Q96I45 108 aa5.55□□□□□ -1.52
USP3-210ENST00000559192 MLST8Q9BVC4 326 aa5.55□□□□□ -1.52
USP3-210ENST00000559192 SMIM2Q9BVW6 85 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms