RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 RANP62826 216 aaKnown RBP6.9□□□□□ -1.31
SPG11-214ENST00000558989 LINC00476Q8WZB0 136 aa6.9□□□□□ -1.31
SPG11-214ENST00000558989 PTH2Q96A98 100 aa6.9□□□□□ -1.31
SPG11-214ENST00000558989 FXYD5Q96DB9 178 aa6.9□□□□□ -1.31
SPG11-214ENST00000558989 HYLS1Q96M11 299 aa6.9□□□□□ -1.31
SPG11-214ENST00000558989 TRAV10A0A0B4J240 114 aa6.89□□□□□ -1.31
SPG11-214ENST00000558989 TRAV12-3A0A0B4J271 114 aa6.89□□□□□ -1.31
SPG11-214ENST00000558989 AMBPP02760 352 aa6.89□□□□□ -1.31
SPG11-214ENST00000558989 S100A1P23297 94 aa6.89□□□□□ -1.31
SPG11-214ENST00000558989 ACOT6Q3I5F7 207 aaPredicted RBP6.89□□□□□ -1.31
SPG11-214ENST00000558989 SH3BGRL3Q9H299 93 aa6.89□□□□□ -1.31
SPG11-214ENST00000558989 DEFB130BP0DP73 79 aa6.88□□□□□ -1.31
SPG11-214ENST00000558989 DEFB130AP0DP74 79 aa6.88□□□□□ -1.31
SPG11-214ENST00000558989 ATP6V0CP27449 155 aa6.88□□□□□ -1.31
SPG11-214ENST00000558989 GFI1BQ5VTD9 330 aa6.88□□□□□ -1.31
SPG11-214ENST00000558989 OR10G4Q8NGN3 311 aa6.88□□□□□ -1.31
SPG11-214ENST00000558989 OR10G9Q8NGN4 311 aa6.88□□□□□ -1.31
SPG11-214ENST00000558989 OR10G7Q8NGN6 311 aa6.88□□□□□ -1.31
SPG11-214ENST00000558989 AQP10Q96PS8 301 aa6.88□□□□□ -1.31
SPG11-214ENST00000558989 VGLL1Q99990 258 aa6.88□□□□□ -1.31
SPG11-214ENST00000558989 DKK2Q9UBU2 259 aa6.88□□□□□ -1.31
SPG11-214ENST00000558989 IGHV4-4A0A075B6R2 117 aa6.87□□□□□ -1.31
SPG11-214ENST00000558989 TRBV7-9A0A0J9YWB2 115 aa6.87□□□□□ -1.31
SPG11-214ENST00000558989 TMEM189A5PLL7 270 aa6.87□□□□□ -1.31
SPG11-214ENST00000558989 C11orf94C9JXX5 98 aa6.87□□□□□ -1.31
SPG11-214ENST00000558989 ARPC5O15511 151 aa6.87□□□□□ -1.31
SPG11-214ENST00000558989 ZNF253O75346 499 aa6.87□□□□□ -1.31
SPG11-214ENST00000558989 ORM1P02763 201 aa6.87□□□□□ -1.31
SPG11-214ENST00000558989 TAS2R45P59539 299 aa6.87□□□□□ -1.31
SPG11-214ENST00000558989 ZNF266Q14584 549 aa6.87□□□□□ -1.31
SPG11-214ENST00000558989 KHDC3LQ587J8 217 aa6.87□□□□□ -1.31
SPG11-214ENST00000558989 RPL7L1Q6DKI1 246 aaKnown RBP6.87□□□□□ -1.31
SPG11-214ENST00000558989 Q8TAT8 98 aa6.87□□□□□ -1.31
SPG11-214ENST00000558989 AGPAT4-IT1Q9H0P7 198 aa6.87□□□□□ -1.31
SPG11-214ENST00000558989 Q9H3A6 140 aa6.87□□□□□ -1.31
SPG11-214ENST00000558989 TSPOP30536 169 aa6.87□□□□□ -1.31
SPG11-214ENST00000558989 RNASE4P34096 147 aaKnown RBP6.87□□□□□ -1.31
SPG11-214ENST00000558989 LEPP41159 167 aa6.87□□□□□ -1.31
SPG11-214ENST00000558989 DAD1P61803 113 aa6.87□□□□□ -1.31
SPG11-214ENST00000558989 BTN1A1Q13410 526 aa6.87□□□□□ -1.31
SPG11-214ENST00000558989 PDE6HQ13956 83 aa6.87□□□□□ -1.31
SPG11-214ENST00000558989 TNFSF18Q9UNG2 199 aa6.87□□□□□ -1.31
SPG11-214ENST00000558989 DNAH1Q9P2D7 4330 aa6.86□□□□□ -1.31
SPG11-214ENST00000558989 CD300CQ08708 224 aa6.86□□□□□ -1.31
SPG11-214ENST00000558989 TMEM78Q5T7P6 136 aa6.86□□□□□ -1.31
SPG11-214ENST00000558989 Q6ZQT7 251 aa6.86□□□□□ -1.31
SPG11-214ENST00000558989 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.86□□□□□ -1.31
SPG11-214ENST00000558989 APLNQ9ULZ1 77 aa6.86□□□□□ -1.31
SPG11-214ENST00000558989 PGPA6NDG6 321 aa6.85□□□□□ -1.31
SPG11-214ENST00000558989 G3V3Q6 166 aa6.85□□□□□ -1.31
SPG11-214ENST00000558989 GPX1P07203 203 aa6.85□□□□□ -1.31
SPG11-214ENST00000558989 ARL14EPLP0DKL9 152 aa6.85□□□□□ -1.31
SPG11-214ENST00000558989 CSN1S1P47710 185 aa6.85□□□□□ -1.31
SPG11-214ENST00000558989 TAS2R60P59551 318 aa6.85□□□□□ -1.31
SPG11-214ENST00000558989 TMEM256Q8N2U0 113 aa6.85□□□□□ -1.31
SPG11-214ENST00000558989 NOP10Q9NPE3 64 aaKnown RBP6.85□□□□□ -1.31
SPG11-214ENST00000558989 PAM16Q9Y3D7 125 aa6.85□□□□□ -1.31
SPG11-214ENST00000558989 BORCS7-ASMTA0A0B4J1R7 106 aa6.85□□□□□ -1.31
SPG11-214ENST00000558989 C7orf71A4D174 169 aa6.85□□□□□ -1.31
SPG11-214ENST00000558989 K7EN84 100 aa6.85□□□□□ -1.31
SPG11-214ENST00000558989 GNG5P63218 68 aa6.85□□□□□ -1.31
SPG11-214ENST00000558989 PRR9Q5T870 116 aa6.85□□□□□ -1.31
SPG11-214ENST00000558989 LINC01561Q8N1V8 128 aa6.85□□□□□ -1.31
SPG11-214ENST00000558989 C15orf54Q8N8G6 183 aa6.85□□□□□ -1.31
SPG11-214ENST00000558989 OR2G3Q8NGZ4 309 aa6.85□□□□□ -1.31
SPG11-214ENST00000558989 PLAC8L1A1L4L8 177 aa6.84□□□□□ -1.31
SPG11-214ENST00000558989 H7BYZ3 331 aa6.84□□□□□ -1.31
SPG11-214ENST00000558989 PDZD11Q5EBL8 140 aa6.84□□□□□ -1.31
SPG11-214ENST00000558989 CMTM2Q8TAZ6 248 aa6.84□□□□□ -1.31
SPG11-214ENST00000558989 ASB13Q8WXK3 278 aa6.84□□□□□ -1.31
SPG11-214ENST00000558989 C16orf74Q96GX8 76 aa6.84□□□□□ -1.31
SPG11-214ENST00000558989 LINC00477Q96M19 166 aa6.84□□□□□ -1.31
SPG11-214ENST00000558989 TEX48A0A1B0GUV7 120 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 F5H768 121 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 C9orf47Q6ZRZ4 202 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 GOLT1AQ6ZVE7 132 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 PSMG3Q9BT73 122 aaPredicted RBP6.83□□□□□ -1.32
SPG11-214ENST00000558989 ZNF492Q9P255 531 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 KMT2AQ03164 3969 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 TRAV8-1A0A0A6YYK1 113 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 SNURFLB1AK76 121 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 GAGE7O76087 117 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 SLC25A5P05141 298 aaKnown RBP6.83□□□□□ -1.32
SPG11-214ENST00000558989 GAGE12FP0CL80 117 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 GAGE12GP0CL81 117 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 GAGE12IP0CL82 117 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 ZNF138P52744 262 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 FGF8P55075 233 aaPredicted RBP6.83□□□□□ -1.32
SPG11-214ENST00000558989 XGP55808 180 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 MUC21Q5SSG8 566 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 LGALS9CQ6DKI2 356 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 ATRAIDQ6UW56 229 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 TMEM263Q8WUH6 116 aaKnown RBP6.83□□□□□ -1.32
SPG11-214ENST00000558989 ODF3Q96PU9 254 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 TMPRSS5Q9H3S3 457 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 OTORQ9NRC9 128 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 TP53TG3Q9ULZ0 132 aa6.83□□□□□ -1.32
SPG11-214ENST00000558989 TIMM8BQ9Y5J9 83 aaPredicted RBP6.83□□□□□ -1.32
SPG11-214ENST00000558989 LYRM9A8MSI8 78 aa6.82□□□□□ -1.32
SPG11-214ENST00000558989 GCHFRP30047 84 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms