RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 C2orf88Q9BSF0 95 aa5.83□□□□□ -1.48
LRRC28-211ENST00000558890 SIGLEC8Q9NYZ4 499 aa5.83□□□□□ -1.48
LRRC28-211ENST00000558890 SMAD5-AS1Q9Y6J3 95 aa5.83□□□□□ -1.48
LRRC28-211ENST00000558890 IGHV3OR16-8A0A075B7F1 116 aa5.82□□□□□ -1.48
LRRC28-211ENST00000558890 TMSB15BA0A087X1C1 80 aa5.82□□□□□ -1.48
LRRC28-211ENST00000558890 LINC01619G3V211 115 aa5.82□□□□□ -1.48
LRRC28-211ENST00000558890 LINC00614P0C842 121 aa5.82□□□□□ -1.48
LRRC28-211ENST00000558890 CTRLP40313 264 aa5.82□□□□□ -1.48
LRRC28-211ENST00000558890 CRIP1P50238 77 aa5.82□□□□□ -1.48
LRRC28-211ENST00000558890 FAM106AQ4KMX7 169 aa5.82□□□□□ -1.48
LRRC28-211ENST00000558890 SPATA45Q537H7 98 aa5.82□□□□□ -1.48
LRRC28-211ENST00000558890 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.82□□□□□ -1.48
LRRC28-211ENST00000558890 FA2HQ7L5A8 372 aa5.82□□□□□ -1.48
LRRC28-211ENST00000558890 C11orf44Q8N8P7 122 aa5.82□□□□□ -1.48
LRRC28-211ENST00000558890 Q8N976 141 aa5.82□□□□□ -1.48
LRRC28-211ENST00000558890 ASCL2Q99929 193 aa5.82□□□□□ -1.48
LRRC28-211ENST00000558890 PEMTQ9UBM1 199 aa5.82□□□□□ -1.48
LRRC28-211ENST00000558890 HSPB8Q9UJY1 196 aa5.82□□□□□ -1.48
LRRC28-211ENST00000558890 IGHV1-24A0A0C4DH33 117 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 IGHV3-66A0A0C4DH42 116 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 FABP5P3A8MUU1 101 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 CCL24O00175 119 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 WIPF1O43516 503 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 LEPROTL1O95214 131 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 HLA-DMBP28068 263 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 INSL3P51460 131 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 HIST1H1AQ02539 215 aaPredicted RBP5.81□□□□□ -1.48
LRRC28-211ENST00000558890 TMEM78Q5T7P6 136 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 IGFL4Q6B9Z1 124 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 LYZL1Q6UWQ5 148 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 ZNF493Q6ZR52 646 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 C18orf65Q6ZTR6 163 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 C8orf86Q6ZUL3 223 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 WFDC9Q8NEX5 89 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 OR1N2Q8NGR9 330 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 DPF1Q92782 380 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 VGLL1Q99990 258 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 TMEM70Q9BUB7 260 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 MCRIP2Q9BUT9 160 aaKnown RBP5.81□□□□□ -1.48
LRRC28-211ENST00000558890 TMEM191AQ9H0A3 160 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 DAZ1Q9NQZ3 744 aaKnown RBP5.81□□□□□ -1.48
LRRC28-211ENST00000558890 UQCR10Q9UDW1 63 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 UFC1Q9Y3C8 167 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 U3KQE9 123 aa5.81□□□□□ -1.48
LRRC28-211ENST00000558890 HSBP1L1C9JCN9 74 aa5.8□□□□□ -1.48
LRRC28-211ENST00000558890 EREGO14944 169 aa5.8□□□□□ -1.48
LRRC28-211ENST00000558890 ZNF207O43670 478 aaKnown RBP5.8□□□□□ -1.48
LRRC28-211ENST00000558890 ORM1P02763 201 aa5.8□□□□□ -1.48
LRRC28-211ENST00000558890 PRB4P10163 310 aaPredicted RBP5.8□□□□□ -1.48
LRRC28-211ENST00000558890 HOXD3P31249 432 aaPredicted RBP5.8□□□□□ -1.48
LRRC28-211ENST00000558890 HNRNPA3P51991 378 aaKnown RBP5.8□□□□□ -1.48
LRRC28-211ENST00000558890 ZNF138P52744 262 aa5.8□□□□□ -1.48
LRRC28-211ENST00000558890 KHDC1LQ5JSQ8 128 aa5.8□□□□□ -1.48
LRRC28-211ENST00000558890 SAMD5Q5TGI4 173 aa5.8□□□□□ -1.48
LRRC28-211ENST00000558890 LCNL1Q6ZST4 164 aa5.8□□□□□ -1.48
LRRC28-211ENST00000558890 ORMDL3Q8N138 153 aa5.8□□□□□ -1.48
LRRC28-211ENST00000558890 OR11H1Q8NG94 326 aa5.8□□□□□ -1.48
LRRC28-211ENST00000558890 OR2K2Q8NGT1 345 aa5.8□□□□□ -1.48
LRRC28-211ENST00000558890 OR10AG1Q8NH19 301 aa5.8□□□□□ -1.48
LRRC28-211ENST00000558890 PRSS3P2Q8NHM4 247 aa5.8□□□□□ -1.48
LRRC28-211ENST00000558890 RAX2Q96IS3 184 aa5.8□□□□□ -1.48
LRRC28-211ENST00000558890 C16orf92Q96LL3 132 aa5.8□□□□□ -1.48
LRRC28-211ENST00000558890 MAP1LC3CQ9BXW4 147 aa5.8□□□□□ -1.48
LRRC28-211ENST00000558890 AP5S1Q9NUS5 200 aa5.8□□□□□ -1.48
LRRC28-211ENST00000558890 ZMAT5Q9UDW3 170 aaKnown RBP5.8□□□□□ -1.48
LRRC28-211ENST00000558890 DNAH9Q9NYC9 4486 aa5.8□□□□□ -1.48
LRRC28-211ENST00000558890 IGHV4OR15-8A0A075B7B6 117 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 IGHV3OR16-13A0A075B7E8 117 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 TRAV9-2A0A087WT02 112 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 A0A087WW49 117 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 IGHV3-49A0A0A0MS15 119 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 IGHV3-74A0A0B4J1X5 117 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 TRAV8-2A0A0B4J237 113 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 A0A1B0GV90 55 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 OVOL1O14753 267 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 IGHV3-11P01762 117 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 CSN3P07498 182 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 IGLC6P0CF74 106 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 ERCC8Q13216 396 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 TWIST1Q15672 202 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 SAMD13Q5VXD3 122 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 FAM104BQ5XKR9 115 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 EBLN2Q6P2I7 272 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 PET117Q6UWS5 81 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 SMIM15Q7Z3B0 74 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 RNF182Q8N6D2 247 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 LINC00482Q8N8I6 264 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 ZNF738Q8NE65 137 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 GLMPQ8WWB7 406 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 URB1-AS1Q96HZ7 61 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 PRELID3AQ96N28 172 aa5.79□□□□□ -1.48
LRRC28-211ENST00000558890 TMEM213A2RRL7 107 aa5.78□□□□□ -1.48
LRRC28-211ENST00000558890 C2orf70A6NJV1 201 aa5.78□□□□□ -1.48
LRRC28-211ENST00000558890 PRAC2D3DTV9 90 aa5.78□□□□□ -1.48
LRRC28-211ENST00000558890 D6R8Y8 96 aa5.78□□□□□ -1.48
LRRC28-211ENST00000558890 SYS1-DBNDD2H3BUS1 97 aa5.78□□□□□ -1.48
LRRC28-211ENST00000558890 PPBPP02775 128 aa5.78□□□□□ -1.48
LRRC28-211ENST00000558890 PF4P02776 101 aa5.78□□□□□ -1.48
LRRC28-211ENST00000558890 ZNF80P51504 273 aaPredicted RBP5.78□□□□□ -1.48
LRRC28-211ENST00000558890 SSTP61278 116 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms