RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 SRRQ9GZT4 340 aa3.53□□□□□ -1.84
LRRC28-208ENST00000558771 MCUBQ9NWR8 336 aa3.53□□□□□ -1.84
LRRC28-208ENST00000558771 CCDC59Q9P031 241 aaKnown RBP3.53□□□□□ -1.84
LRRC28-208ENST00000558771 TRBV19A0A075B6N1 114 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 IGKV2-40A0A087WW87 121 aaPredicted RBP3.52□□□□□ -1.85
LRRC28-208ENST00000558771 IGHV3-16A0A0C4DH30 117 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 CTDSP2O14595 271 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 CTDSPLO15194 276 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 RGS5O15539 181 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 SSSCA1O60232 199 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 NDUFB4O95168 129 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 SFT2D2O95562 160 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 IGKV2D-40P01614 121 aaPredicted RBP3.52□□□□□ -1.85
LRRC28-208ENST00000558771 PFN1P07737 140 aaKnown RBP3.52□□□□□ -1.85
LRRC28-208ENST00000558771 GATA1P15976 413 aaPredicted RBP3.52□□□□□ -1.85
LRRC28-208ENST00000558771 ARL16Q0P5N6 197 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 IL18Q14116 193 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 TMEM183BQ1AE95 376 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 TMEM78Q5T7P6 136 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 LELP1Q5T871 98 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 TMEM14EPQ6UXP3 125 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 TMEM183AQ8IXX5 376 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 EXOC3-AS1Q8N2X6 119 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 OR4C5Q8NGB2 326 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 SMIM8Q96KF7 97 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 MGST2Q99735 147 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 SOSTQ9BQB4 213 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 SPXQ9BT56 116 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 NAA50Q9GZZ1 169 aaKnown RBP3.52□□□□□ -1.85
LRRC28-208ENST00000558771 VCX3AQ9NNX9 186 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 ZNF492Q9P255 531 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 PRELID1Q9Y255 219 aa3.52□□□□□ -1.85
LRRC28-208ENST00000558771 A0A087WXM4 84 aa3.51□□□□□ -1.85
LRRC28-208ENST00000558771 TRAV8-3A0A0A6YYJ7 113 aa3.51□□□□□ -1.85
LRRC28-208ENST00000558771 RNF222A6NCQ9 220 aa3.51□□□□□ -1.85
LRRC28-208ENST00000558771 UBE2MP61081 183 aaKnown RBP3.51□□□□□ -1.85
LRRC28-208ENST00000558771 PPP1R1AQ13522 171 aa3.51□□□□□ -1.85
LRRC28-208ENST00000558771 MIC13Q5XKP0 118 aa3.51□□□□□ -1.85
LRRC28-208ENST00000558771 FAM122CQ6P4D5 195 aa3.51□□□□□ -1.85
LRRC28-208ENST00000558771 Q6ZRG5 221 aa3.51□□□□□ -1.85
LRRC28-208ENST00000558771 Q6ZRU5 148 aa3.51□□□□□ -1.85
LRRC28-208ENST00000558771 DAZ4Q86SG3 579 aaKnown RBP3.51□□□□□ -1.85
LRRC28-208ENST00000558771 SLC25A29Q8N8R3 303 aa3.51□□□□□ -1.85
LRRC28-208ENST00000558771 Q8N976 141 aa3.51□□□□□ -1.85
LRRC28-208ENST00000558771 OR1L4Q8NGR5 311 aa3.51□□□□□ -1.85
LRRC28-208ENST00000558771 Q8TAT8 98 aa3.51□□□□□ -1.85
LRRC28-208ENST00000558771 DAZ3Q9NR90 486 aaKnown RBP3.51□□□□□ -1.85
LRRC28-208ENST00000558771 TIMM9Q9Y5J7 89 aa3.51□□□□□ -1.85
LRRC28-208ENST00000558771 LPAP08519 4548 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 FABP12A6NFH5 140 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 FBLL1A6NHQ2 334 aaKnown RBP3.5□□□□□ -1.85
LRRC28-208ENST00000558771 GGTLC3B5MD39 225 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 M0R2P5 195 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 GAS8-AS1O95177 125 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 ATP6V1G2O95670 118 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 PYYP10082 97 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 HIST1H1EP10412 219 aaKnown RBP3.5□□□□□ -1.85
LRRC28-208ENST00000558771 CAMLGP49069 296 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 ZNF138P52744 262 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 PDE6HQ13956 83 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 ZNF266Q14584 549 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 RHOHQ15669 191 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 CTF1Q16619 201 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 FAM159AQ6UWV7 190 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 NRARPQ7Z6K4 114 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 ATP6V0E2Q8NHE4 81 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 DIRAS2Q96HU8 199 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 DNAJC30Q96LL9 226 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 PFDN5Q99471 154 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 PRADC1Q9BSG0 188 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 PAXXQ9BUH6 204 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 GTSF1LQ9H1H1 148 aa3.5□□□□□ -1.85
LRRC28-208ENST00000558771 IGKV2D-24A0A075B6R9 120 aa3.49□□□□□ -1.85
LRRC28-208ENST00000558771 TRBV7-9A0A0J9YWB2 115 aa3.49□□□□□ -1.85
LRRC28-208ENST00000558771 TRBV6-4A0A1B0GX49 114 aa3.49□□□□□ -1.85
LRRC28-208ENST00000558771 GNRH2O43555 120 aa3.49□□□□□ -1.85
LRRC28-208ENST00000558771 TSC22D2O75157 780 aa3.49□□□□□ -1.85
LRRC28-208ENST00000558771 Q6AWC8 147 aa3.49□□□□□ -1.85
LRRC28-208ENST00000558771 C12orf45Q8N5I9 185 aaPredicted RBP3.49□□□□□ -1.85
LRRC28-208ENST00000558771 PRR26Q8N8Z3 221 aa3.49□□□□□ -1.85
LRRC28-208ENST00000558771 RMI2Q96E14 147 aa3.49□□□□□ -1.85
LRRC28-208ENST00000558771 GGACTQ9BVM4 153 aa3.49□□□□□ -1.85
LRRC28-208ENST00000558771 TMEM14CQ9P0S9 112 aa3.49□□□□□ -1.85
LRRC28-208ENST00000558771 RABL2AQ9UBK7 228 aaPredicted RBP3.49□□□□□ -1.85
LRRC28-208ENST00000558771 NAGKQ9UJ70 344 aa3.49□□□□□ -1.85
LRRC28-208ENST00000558771 RPH3ALQ9UNE2 315 aa3.49□□□□□ -1.85
LRRC28-208ENST00000558771 TRAV8-1A0A0A6YYK1 113 aa3.48□□□□□ -1.85
LRRC28-208ENST00000558771 IGHV3-73A0A0B4J1V6 119 aa3.48□□□□□ -1.85
LRRC28-208ENST00000558771 C9orf170A2RU37 121 aa3.48□□□□□ -1.85
LRRC28-208ENST00000558771 C7orf66A4D0T2 115 aa3.48□□□□□ -1.85
LRRC28-208ENST00000558771 C5orf51A6NDU8 294 aa3.48□□□□□ -1.85
LRRC28-208ENST00000558771 TYMSP04818 313 aa3.48□□□□□ -1.85
LRRC28-208ENST00000558771 OR10J4P0C629 311 aa3.48□□□□□ -1.85
LRRC28-208ENST00000558771 FAUP35544 74 aaKnown RBP3.48□□□□□ -1.85
LRRC28-208ENST00000558771 RPL29P47914 159 aaKnown RBP3.48□□□□□ -1.85
LRRC28-208ENST00000558771 TAS2R30P59541 319 aa3.48□□□□□ -1.85
LRRC28-208ENST00000558771 RAB31Q13636 194 aa3.48□□□□□ -1.85
LRRC28-208ENST00000558771 VWC2Q2TAL6 325 aa3.48□□□□□ -1.85
LRRC28-208ENST00000558771 CFAP126Q5VTH2 177 aa3.48□□□□□ -1.85
LRRC28-208ENST00000558771 DPPA3Q6W0C5 159 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms