RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 A0A0A0MQY5 61 aa5.56□□□□□ -1.52
TRAF3-205ENST00000558700 H2BFSP57053 126 aa5.56□□□□□ -1.52
TRAF3-205ENST00000558700 SLAQ13239 276 aa5.56□□□□□ -1.52
TRAF3-205ENST00000558700 ZNF266Q14584 549 aa5.56□□□□□ -1.52
TRAF3-205ENST00000558700 ESRGQ1W209 222 aa5.56□□□□□ -1.52
TRAF3-205ENST00000558700 FAM74A1Q5RGS3 127 aa5.56□□□□□ -1.52
TRAF3-205ENST00000558700 SCGB1C1Q8TD33 95 aa5.56□□□□□ -1.52
TRAF3-205ENST00000558700 MARVELD1Q9BSK0 173 aa5.56□□□□□ -1.52
TRAF3-205ENST00000558700 PRO0255Q9UI72 69 aa5.56□□□□□ -1.52
TRAF3-205ENST00000558700 KLF12Q9Y4X4 402 aa5.56□□□□□ -1.52
TRAF3-205ENST00000558700 PKD1P98161 4303 aa5.55□□□□□ -1.52
TRAF3-205ENST00000558700 MPC2O95563 127 aa5.55□□□□□ -1.52
TRAF3-205ENST00000558700 IGHV3-53P01767 116 aa5.55□□□□□ -1.52
TRAF3-205ENST00000558700 RPL12P30050 165 aaKnown RBP5.55□□□□□ -1.52
TRAF3-205ENST00000558700 RANP62826 216 aaKnown RBP5.55□□□□□ -1.52
TRAF3-205ENST00000558700 Q6AWC8 147 aa5.55□□□□□ -1.52
TRAF3-205ENST00000558700 CMTM2Q8TAZ6 248 aa5.55□□□□□ -1.52
TRAF3-205ENST00000558700 TM2D2Q9BX73 214 aa5.55□□□□□ -1.52
TRAF3-205ENST00000558700 SMIM3Q9BZL3 60 aa5.55□□□□□ -1.52
TRAF3-205ENST00000558700 MBD2Q9UBB5 411 aa5.55□□□□□ -1.52
TRAF3-205ENST00000558700 TP53TG3Q9ULZ0 132 aa5.55□□□□□ -1.52
TRAF3-205ENST00000558700 TRGV4A0A0C4DH28 118 aa5.54□□□□□ -1.52
TRAF3-205ENST00000558700 SIVA1O15304 175 aa5.54□□□□□ -1.52
TRAF3-205ENST00000558700 NXPH4O95158 308 aa5.54□□□□□ -1.52
TRAF3-205ENST00000558700 LINC00315P59091 139 aa5.54□□□□□ -1.52
TRAF3-205ENST00000558700 IFITM3Q01628 133 aa5.54□□□□□ -1.52
TRAF3-205ENST00000558700 MRPL23Q16540 153 aaKnown RBP5.54□□□□□ -1.52
TRAF3-205ENST00000558700 ACOT6Q3I5F7 207 aaPredicted RBP5.54□□□□□ -1.52
TRAF3-205ENST00000558700 MUC21Q5SSG8 566 aa5.54□□□□□ -1.52
TRAF3-205ENST00000558700 FAM159AQ6UWV7 190 aa5.54□□□□□ -1.52
TRAF3-205ENST00000558700 PQLC2Q6ZP29 291 aa5.54□□□□□ -1.52
TRAF3-205ENST00000558700 SPATA12Q7Z6I5 190 aa5.54□□□□□ -1.52
TRAF3-205ENST00000558700 PCNPQ8WW12 178 aaKnown RBP5.54□□□□□ -1.52
TRAF3-205ENST00000558700 TMED6Q8WW62 240 aa5.54□□□□□ -1.52
TRAF3-205ENST00000558700 SPXQ9BT56 116 aa5.54□□□□□ -1.52
TRAF3-205ENST00000558700 OTORQ9NRC9 128 aa5.54□□□□□ -1.52
TRAF3-205ENST00000558700 RPH3ALQ9UNE2 315 aa5.54□□□□□ -1.52
TRAF3-205ENST00000558700 RYR1P21817 5038 aa5.54□□□□□ -1.52
TRAF3-205ENST00000558700 RHODO00212 210 aa5.53□□□□□ -1.52
TRAF3-205ENST00000558700 SRIP30626 198 aa5.53□□□□□ -1.52
TRAF3-205ENST00000558700 CRYBA4P53673 196 aa5.53□□□□□ -1.52
TRAF3-205ENST00000558700 ERVFC1-1P60608 527 aa5.53□□□□□ -1.52
TRAF3-205ENST00000558700 TMEM183BQ1AE95 376 aa5.53□□□□□ -1.52
TRAF3-205ENST00000558700 KRTAP19-4Q3LI73 84 aa5.53□□□□□ -1.52
TRAF3-205ENST00000558700 TMEM183AQ8IXX5 376 aa5.53□□□□□ -1.52
TRAF3-205ENST00000558700 ARL6IP6Q8N6S5 226 aa5.53□□□□□ -1.52
TRAF3-205ENST00000558700 OR10G4Q8NGN3 311 aa5.53□□□□□ -1.52
TRAF3-205ENST00000558700 HYLS1Q96M11 299 aa5.53□□□□□ -1.52
TRAF3-205ENST00000558700 NAGKQ9UJ70 344 aa5.53□□□□□ -1.52
TRAF3-205ENST00000558700 HHLA3Q9XRX5 114 aa5.53□□□□□ -1.52
TRAF3-205ENST00000558700 TRAV21A0A0B4J279 112 aa5.52□□□□□ -1.53
TRAF3-205ENST00000558700 SERTM2A0A1B0GWG4 89 aa5.52□□□□□ -1.53
TRAF3-205ENST00000558700 A0A1W2PPV4 95 aa5.52□□□□□ -1.53
TRAF3-205ENST00000558700 ORM1P02763 201 aa5.52□□□□□ -1.53
TRAF3-205ENST00000558700 RAB2AP61019 212 aa5.52□□□□□ -1.53
TRAF3-205ENST00000558700 FHL2Q14192 279 aa5.52□□□□□ -1.53
TRAF3-205ENST00000558700 TDRG1Q3Y452 100 aa5.52□□□□□ -1.53
TRAF3-205ENST00000558700 SUMO4Q6EEV6 95 aa5.52□□□□□ -1.53
TRAF3-205ENST00000558700 Q6ZQT7 251 aa5.52□□□□□ -1.53
TRAF3-205ENST00000558700 GOLT1AQ6ZVE7 132 aa5.52□□□□□ -1.53
TRAF3-205ENST00000558700 NEGR1Q7Z3B1 354 aa5.52□□□□□ -1.53
TRAF3-205ENST00000558700 MAPKAPK5-AS1Q8N8E1 139 aa5.52□□□□□ -1.53
TRAF3-205ENST00000558700 TXNDC17Q9BRA2 123 aa5.52□□□□□ -1.53
TRAF3-205ENST00000558700 NDFIP1Q9BT67 221 aa5.52□□□□□ -1.53
TRAF3-205ENST00000558700 TRAV4A0A0B4J268 109 aa5.51□□□□□ -1.53
TRAF3-205ENST00000558700 TRAV34A0A0B4J273 112 aa5.51□□□□□ -1.53
TRAF3-205ENST00000558700 PGPA6NDG6 321 aa5.51□□□□□ -1.53
TRAF3-205ENST00000558700 C9JCJ5 164 aa5.51□□□□□ -1.53
TRAF3-205ENST00000558700 F6UZH7 168 aa5.51□□□□□ -1.53
TRAF3-205ENST00000558700 K7EP13 123 aa5.51□□□□□ -1.53
TRAF3-205ENST00000558700 SFTA3P0C7M3 94 aa5.51□□□□□ -1.53
TRAF3-205ENST00000558700 CDC34P49427 236 aaPredicted RBP5.51□□□□□ -1.53
TRAF3-205ENST00000558700 Q6ZRN7 208 aaPredicted RBP5.51□□□□□ -1.53
TRAF3-205ENST00000558700 NFE4Q86UQ8 179 aa5.51□□□□□ -1.53
TRAF3-205ENST00000558700 IQCF2Q8IXL9 164 aa5.51□□□□□ -1.53
TRAF3-205ENST00000558700 RASL10AQ92737 203 aa5.51□□□□□ -1.53
TRAF3-205ENST00000558700 ZNF479Q96JC4 524 aa5.51□□□□□ -1.53
TRAF3-205ENST00000558700 KCNS1Q96KK3 526 aa5.51□□□□□ -1.53
TRAF3-205ENST00000558700 SDF2L1Q9HCN8 221 aa5.51□□□□□ -1.53
TRAF3-205ENST00000558700 MDFICQ9P1T7 246 aa5.51□□□□□ -1.53
TRAF3-205ENST00000558700 LY96Q9Y6Y9 160 aa5.51□□□□□ -1.53
TRAF3-205ENST00000558700 TRAV9-2A0A087WT02 112 aa5.5□□□□□ -1.53
TRAF3-205ENST00000558700 K7EQD1 137 aa5.5□□□□□ -1.53
TRAF3-205ENST00000558700 K7EQM0 130 aa5.5□□□□□ -1.53
TRAF3-205ENST00000558700 M0R2P5 195 aa5.5□□□□□ -1.53
TRAF3-205ENST00000558700 EIF3GO75821 320 aaKnown RBP eCLIP5.5□□□□□ -1.53
TRAF3-205ENST00000558700 ARL14EPLP0DKL9 152 aa5.5□□□□□ -1.53
TRAF3-205ENST00000558700 VPREB1P12018 145 aa5.5□□□□□ -1.53
TRAF3-205ENST00000558700 KRTAP10-2P60368 255 aa5.5□□□□□ -1.53
TRAF3-205ENST00000558700 FOXI1Q12951 378 aa5.5□□□□□ -1.53
TRAF3-205ENST00000558700 LYPD5Q6UWN5 251 aa5.5□□□□□ -1.53
TRAF3-205ENST00000558700 SH2D6Q7Z4S9 175 aa5.5□□□□□ -1.53
TRAF3-205ENST00000558700 C5orf17Q8NAS9 161 aa5.5□□□□□ -1.53
TRAF3-205ENST00000558700 HSD17B11Q8NBQ5 300 aa5.5□□□□□ -1.53
TRAF3-205ENST00000558700 OR10G9Q8NGN4 311 aa5.5□□□□□ -1.53
TRAF3-205ENST00000558700 OR10G7Q8NGN6 311 aa5.5□□□□□ -1.53
TRAF3-205ENST00000558700 OR2G3Q8NGZ4 309 aa5.5□□□□□ -1.53
TRAF3-205ENST00000558700 TREM1Q9NP99 234 aa5.5□□□□□ -1.53
TRAF3-205ENST00000558700 ABCA13Q86UQ4 5058 aa5.49□□□□□ -1.53
TRAF3-205ENST00000558700 TRAV8-1A0A0A6YYK1 113 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms