RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 LY6EQ16553 131 aa6.32□□□□□ -1.4
SPG11-209ENST00000558253 SPANXN1Q5VSR9 72 aa6.32□□□□□ -1.4
SPG11-209ENST00000558253 PRSS57Q6UWY2 283 aa6.32□□□□□ -1.4
SPG11-209ENST00000558253 Q71RC1 249 aaPredicted RBP6.32□□□□□ -1.4
SPG11-209ENST00000558253 ATOH7Q8N100 152 aa6.32□□□□□ -1.4
SPG11-209ENST00000558253 OR2K2Q8NGT1 345 aa6.32□□□□□ -1.4
SPG11-209ENST00000558253 AP1S3Q96PC3 154 aa6.32□□□□□ -1.4
SPG11-209ENST00000558253 C20orf78Q9BR46 151 aa6.32□□□□□ -1.4
SPG11-209ENST00000558253 RHPN1-AS1Q9BWJ2 59 aa6.32□□□□□ -1.4
SPG11-209ENST00000558253 IGF2RP11717 2491 aa6.31□□□□□ -1.4
SPG11-209ENST00000558253 ARHGAP32A7KAX9 2087 aa6.31□□□□□ -1.4
SPG11-209ENST00000558253 M0R381 172 aa6.31□□□□□ -1.4
SPG11-209ENST00000558253 SMAD7O15105 426 aaKnown RBP6.31□□□□□ -1.4
SPG11-209ENST00000558253 LEPP41159 167 aa6.31□□□□□ -1.4
SPG11-209ENST00000558253 BLCAPP62952 87 aa6.31□□□□□ -1.4
SPG11-209ENST00000558253 UNQ9165/PRO28630Q6UXU0 137 aa6.31□□□□□ -1.4
SPG11-209ENST00000558253 LINC00173Q6ZV60 143 aa6.31□□□□□ -1.4
SPG11-209ENST00000558253 ZFAND2AQ8N6M9 145 aa6.31□□□□□ -1.4
SPG11-209ENST00000558253 OR8A1Q8NGG7 326 aa6.31□□□□□ -1.4
SPG11-209ENST00000558253 OR5A1Q8NGJ0 315 aa6.31□□□□□ -1.4
SPG11-209ENST00000558253 OR9G4Q8NGQ1 327 aa6.31□□□□□ -1.4
SPG11-209ENST00000558253 A0A096LNJ9 63 aa6.3□□□□□ -1.4
SPG11-209ENST00000558253 IGHV3-49A0A0A0MS15 119 aa6.3□□□□□ -1.4
SPG11-209ENST00000558253 A0A1B0GV72 72 aa6.3□□□□□ -1.4
SPG11-209ENST00000558253 GAGE12BA1L429 117 aa6.3□□□□□ -1.4
SPG11-209ENST00000558253 A6NDN8 102 aa6.3□□□□□ -1.4
SPG11-209ENST00000558253 J3QR89 54 aa6.3□□□□□ -1.4
SPG11-209ENST00000558253 TAX1BP3O14907 124 aa6.3□□□□□ -1.4
SPG11-209ENST00000558253 ZZEF1O43149 2961 aa6.3□□□□□ -1.4
SPG11-209ENST00000558253 FSHBP01225 129 aa6.3□□□□□ -1.4
SPG11-209ENST00000558253 S100A4P26447 101 aaKnown RBP6.3□□□□□ -1.4
SPG11-209ENST00000558253 SNRPD3P62318 126 aaKnown RBP6.3□□□□□ -1.4
SPG11-209ENST00000558253 RPL32P62910 135 aaKnown RBP6.3□□□□□ -1.4
SPG11-209ENST00000558253 RPL11P62913 178 aaKnown RBP6.3□□□□□ -1.4
SPG11-209ENST00000558253 ORMDL2Q53FV1 153 aa6.3□□□□□ -1.4
SPG11-209ENST00000558253 TM4SF20Q53R12 229 aa6.3□□□□□ -1.4
SPG11-209ENST00000558253 BVES-AS1Q5T3Y7 98 aa6.3□□□□□ -1.4
SPG11-209ENST00000558253 RNF152Q8N8N0 203 aa6.3□□□□□ -1.4
SPG11-209ENST00000558253 MYOZ3Q8TDC0 251 aa6.3□□□□□ -1.4
SPG11-209ENST00000558253 C20orf173Q96LM9 149 aa6.3□□□□□ -1.4
SPG11-209ENST00000558253 KLK15Q9H2R5 256 aa6.3□□□□□ -1.4
SPG11-209ENST00000558253 DPH3P1Q9H4G8 78 aa6.3□□□□□ -1.4
SPG11-209ENST00000558253 LINC00527Q9UJ94 153 aa6.3□□□□□ -1.4
SPG11-209ENST00000558253 VPREB3Q9UKI3 123 aa6.3□□□□□ -1.4
SPG11-209ENST00000558253 IGHV3OR16-13A0A075B7E8 117 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 A0A096LNT2 108 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 IGHV3-74A0A0B4J1X5 117 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 hDV102S1A0JD36 115 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 GAGE10A6NGK3 116 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 KLLNB2CW77 178 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 G3V4G9 280 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 DUSP14O95147 198 aaKnown RBP6.29□□□□□ -1.4
SPG11-209ENST00000558253 NXPH4O95158 308 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 TGFAP01135 160 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 HLA-DRB4P13762 266 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 LAGE3Q14657 143 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 DEFB112Q30KQ8 113 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 MAJINQ3KP22 176 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 Q6YL49 198 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 POM121L12Q8N7R1 296 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 UBE2E2Q96LR5 201 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 ZMAT4Q9H898 229 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 MSRB1Q9NZV6 116 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 C11orf21Q9P2W6 132 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 PHLDA3Q9Y5J5 127 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 HLA-DRB4X5D2U9 266 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 ABCA1O95477 2261 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 DCHS1Q96JQ0 3298 aa6.29□□□□□ -1.4
SPG11-209ENST00000558253 HIVEP3Q5T1R4 2406 aa6.28□□□□□ -1.4
SPG11-209ENST00000558253 IGLV2-18A0A075B6J9 118 aa6.28□□□□□ -1.4
SPG11-209ENST00000558253 TRAV2A0A0B4J234 112 aa6.28□□□□□ -1.4
SPG11-209ENST00000558253 TRBV12-3P01733 135 aa6.28□□□□□ -1.4
SPG11-209ENST00000558253 IGHV3-11P01762 117 aa6.28□□□□□ -1.4
SPG11-209ENST00000558253 LGALS1P09382 135 aaKnown RBP6.28□□□□□ -1.4
SPG11-209ENST00000558253 TMEM86BQ8N661 226 aa6.28□□□□□ -1.4
SPG11-209ENST00000558253 NRACQ8N912 160 aa6.28□□□□□ -1.4
SPG11-209ENST00000558253 MUC21A0A0G2JKD1 596 aa6.27□□□□□ -1.41
SPG11-209ENST00000558253 MUC21A0A140T8X8 626 aa6.27□□□□□ -1.41
SPG11-209ENST00000558253 SMKR1H3BMG3 65 aa6.27□□□□□ -1.41
SPG11-209ENST00000558253 H3BRM9 83 aa6.27□□□□□ -1.41
SPG11-209ENST00000558253 NCR2O95944 276 aa6.27□□□□□ -1.41
SPG11-209ENST00000558253 NUDT3O95989 172 aa6.27□□□□□ -1.41
SPG11-209ENST00000558253 IGHV4-59P01825 116 aa6.27□□□□□ -1.41
SPG11-209ENST00000558253 PRSS1P07477 247 aa6.27□□□□□ -1.41
SPG11-209ENST00000558253 EVI2AP22794 236 aa6.27□□□□□ -1.41
SPG11-209ENST00000558253 PLNP26678 52 aa6.27□□□□□ -1.41
SPG11-209ENST00000558253 RNASE4P34096 147 aaKnown RBP6.27□□□□□ -1.41
SPG11-209ENST00000558253 MUC21Q5SSG8 566 aa6.27□□□□□ -1.41
SPG11-209ENST00000558253 FAM159AQ6UWV7 190 aa6.27□□□□□ -1.41
SPG11-209ENST00000558253 BOD1L2Q8IYS8 172 aa6.27□□□□□ -1.41
SPG11-209ENST00000558253 Q8N2B8 174 aa6.27□□□□□ -1.41
SPG11-209ENST00000558253 DCANP1Q8TF63 244 aa6.27□□□□□ -1.41
SPG11-209ENST00000558253 LAMA5O15230 3695 aa6.27□□□□□ -1.41
SPG11-209ENST00000558253 HRNRQ86YZ3 2850 aaPredicted RBP6.27□□□□□ -1.41
SPG11-209ENST00000558253 LRBAP50851 2863 aa6.26□□□□□ -1.41
SPG11-209ENST00000558253 IGHV4OR15-8A0A075B7B6 117 aa6.26□□□□□ -1.41
SPG11-209ENST00000558253 A0A087WW49 117 aa6.26□□□□□ -1.41
SPG11-209ENST00000558253 TRAV12-1A0A0B4J245 112 aa6.26□□□□□ -1.41
SPG11-209ENST00000558253 H0Y8G0 127 aa6.26□□□□□ -1.41
SPG11-209ENST00000558253 H3BVH4 76 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms