RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 CENPXA8MT69 81 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 F8WDY8 70 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 H3BP45 60 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 H3BQ15 152 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 K7EQM0 130 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 SLC17A3O00476 420 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 COX7A2P2O60397 106 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 IGLV2-8P01709 118 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 IGHV3-30P01768 117 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 IGHV3-33P01772 117 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 SFTA3P0C7M3 94 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 IGLC2P0DOY2 106 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 IGHV3-30-3P0DP02 117 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 IGHV3-30-5P0DP03 117 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 HIST1H1EP10412 219 aaKnown RBP3.42□□□□□ -1.86
SPG11-208ENST00000558155 LINC00310P59036 64 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 KRTAP10-4P60372 401 aaPredicted RBP3.42□□□□□ -1.86
SPG11-208ENST00000558155 RRAS2P62070 204 aaPredicted RBP3.42□□□□□ -1.86
SPG11-208ENST00000558155 IFITM2Q01629 132 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 ERCC8Q13216 396 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 BTN1A1Q13410 526 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 RAB31Q13636 194 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 LAGE3Q14657 143 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 BAK1Q16611 211 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 TMEM128Q5BJH2 165 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 CST9LP1Q5W188 147 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 Q6ZRG5 221 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 ZNF546Q86UE3 836 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 MTURNQ8N3F0 131 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 C12orf45Q8N5I9 185 aaPredicted RBP3.42□□□□□ -1.86
SPG11-208ENST00000558155 Q8N976 141 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 OR4C5Q8NGB2 326 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 OR10P1Q8NGE3 313 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 OR10G4Q8NGN3 311 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 CIRBP-AS1Q8TBR5 109 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 TMEM37Q8WXS4 190 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 RASL10AQ92737 203 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 MRPL53Q96EL3 112 aaKnown RBP3.42□□□□□ -1.86
SPG11-208ENST00000558155 SMIM8Q96KF7 97 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 FAM19A4Q96LR4 140 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 SH3BGRL3Q9H299 93 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 MCUBQ9NWR8 336 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 COX11Q9Y6N1 276 aa3.42□□□□□ -1.86
SPG11-208ENST00000558155 TRAV4A0A0B4J268 109 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 FAM240BA0A1B0GVZ2 78 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 ANKRD20A5PA0PJZ0 165 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 AGPAT2O15120 278 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 CTDSPLO15194 276 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 RGS5O15539 181 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 ZNF253O75346 499 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 HOXB5P09067 269 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 CRISP2P16562 243 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 RPL37AP61513 92 aaKnown RBP3.41□□□□□ -1.86
SPG11-208ENST00000558155 NHLH2Q02577 135 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 SLC38A11Q08AI6 406 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 ZNF846Q147U1 533 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 TOR2AQ5JU69 321 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 TMEM78Q5T7P6 136 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 TRIQKQ629K1 86 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 C9orf47Q6ZRZ4 202 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 LINC00299Q6ZSB3 139 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 CLRN3Q8NCR9 226 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 OR1L4Q8NGR5 311 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 SMIM4Q8WVI0 70 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 NUDT11Q96G61 164 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 PACRGQ96M98 296 aaPredicted RBP3.41□□□□□ -1.86
SPG11-208ENST00000558155 GGACTQ9BVM4 153 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 FUNDC2Q9BWH2 189 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 SRRQ9GZT4 340 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 TIMM9Q9Y5J7 89 aa3.41□□□□□ -1.86
SPG11-208ENST00000558155 TRBV19A0A075B6N1 114 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 TRBV7-9A0A0J9YWB2 115 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 RNF222A6NCQ9 220 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 M0R3E3 92 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 LECT2O14960 151 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 SFT2D2O95562 160 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 IGLV2-11P01706 119 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 METTL15P1P0C7V9 234 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 FAUP35544 74 aaKnown RBP3.4□□□□□ -1.87
SPG11-208ENST00000558155 WFDC2Q14508 124 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 ZFP69Q49AA0 526 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 LINC01620Q4KN68 170 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 LELP1Q5T871 98 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 FAM159AQ6UWV7 190 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 TMEM14EPQ6UXP3 125 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 Q6ZRU5 148 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 ZFAND2AQ8N6M9 145 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 ATP6V0E2Q8NHE4 81 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 RAB2BQ8WUD1 216 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 S100ZQ8WXG8 99 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 BAALCQ8WXS3 180 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 RAB24Q969Q5 203 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 RMI2Q96E14 147 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 DIRAS2Q96HU8 199 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 PRADC1Q9BSG0 188 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 MIXL1Q9H2W2 232 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 AAMDCQ9H7C9 122 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 NIT2Q9NQR4 276 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 ZNF492Q9P255 531 aa3.4□□□□□ -1.87
SPG11-208ENST00000558155 FLVCR2Q9UPI3 526 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms