RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 TAS2R45P59539 299 aa10.69□□□□□ -0.7
SCFD1-224ENST00000557713 LINC00299Q6ZSB3 139 aa10.69□□□□□ -0.7
SCFD1-224ENST00000557713 ARL6IP6Q8N6S5 226 aa10.69□□□□□ -0.7
SCFD1-224ENST00000557713 TVP23CQ96ET8 276 aa10.69□□□□□ -0.7
SCFD1-224ENST00000557713 MBD2Q9UBB5 411 aa10.69□□□□□ -0.7
SCFD1-224ENST00000557713 IGLV5-52A0A0A0MRZ9 124 aa10.68□□□□□ -0.7
SCFD1-224ENST00000557713 TRAV21A0A0B4J279 112 aa10.68□□□□□ -0.7
SCFD1-224ENST00000557713 IBA57-AS1B1ANH7 110 aa10.68□□□□□ -0.7
SCFD1-224ENST00000557713 FAM229AH3BQW9 127 aa10.68□□□□□ -0.7
SCFD1-224ENST00000557713 TYMSP04818 313 aa10.68□□□□□ -0.7
SCFD1-224ENST00000557713 H2BFSP57053 126 aa10.68□□□□□ -0.7
SCFD1-224ENST00000557713 LINC01556Q5JQF7 62 aa10.68□□□□□ -0.7
SCFD1-224ENST00000557713 NTN5Q8WTR8 489 aaPredicted RBP10.68□□□□□ -0.7
SCFD1-224ENST00000557713 HSPB11Q9Y547 144 aa10.68□□□□□ -0.7
SCFD1-224ENST00000557713 PSCAO43653 123 aa10.67□□□□□ -0.7
SCFD1-224ENST00000557713 HAMPP81172 84 aa10.67□□□□□ -0.7
SCFD1-224ENST00000557713 GOLT1AQ6ZVE7 132 aa10.67□□□□□ -0.7
SCFD1-224ENST00000557713 NHLRC2Q8NBF2 726 aa10.67□□□□□ -0.7
SCFD1-224ENST00000557713 CMTM2Q8TAZ6 248 aa10.67□□□□□ -0.7
SCFD1-224ENST00000557713 PPP1R1CQ8WVI7 109 aa10.67□□□□□ -0.7
SCFD1-224ENST00000557713 TMEM70Q9BUB7 260 aa10.67□□□□□ -0.7
SCFD1-224ENST00000557713 RPH3ALQ9UNE2 315 aa10.67□□□□□ -0.7
SCFD1-224ENST00000557713 FAM74A1Q5RGS3 127 aa10.66□□□□□ -0.7
SCFD1-224ENST00000557713 SLC25A29Q8N8R3 303 aa10.66□□□□□ -0.7
SCFD1-224ENST00000557713 ENKURQ8TC29 256 aa10.66□□□□□ -0.7
SCFD1-224ENST00000557713 SCGB1C1Q8TD33 95 aa10.66□□□□□ -0.7
SCFD1-224ENST00000557713 KCNS1Q96KK3 526 aa10.66□□□□□ -0.7
SCFD1-224ENST00000557713 SDF2L1Q9HCN8 221 aa10.66□□□□□ -0.7
SCFD1-224ENST00000557713 TREM1Q9NP99 234 aa10.66□□□□□ -0.7
SCFD1-224ENST00000557713 TRAV8-1A0A0A6YYK1 113 aa10.65□□□□□ -0.7
SCFD1-224ENST00000557713 FBLL1A6NHQ2 334 aaKnown RBP10.65□□□□□ -0.7
SCFD1-224ENST00000557713 F6UZH7 168 aa10.65□□□□□ -0.7
SCFD1-224ENST00000557713 MPC2O95563 127 aa10.65□□□□□ -0.7
SCFD1-224ENST00000557713 PFN1P07737 140 aaKnown RBP10.65□□□□□ -0.7
SCFD1-224ENST00000557713 PPT1P50897 306 aa10.65□□□□□ -0.7
SCFD1-224ENST00000557713 Q8N814 137 aa10.65□□□□□ -0.7
SCFD1-224ENST00000557713 SMIM3Q9BZL3 60 aa10.65□□□□□ -0.7
SCFD1-224ENST00000557713 BOLA1Q9Y3E2 137 aa10.65□□□□□ -0.7
SCFD1-224ENST00000557713 TRAV8-6A0A0B4J262 113 aa10.64□□□□□ -0.71
SCFD1-224ENST00000557713 TRBV6-4A0A1B0GX49 114 aa10.64□□□□□ -0.71
SCFD1-224ENST00000557713 INMT-MINDY4F8WBC2 141 aa10.64□□□□□ -0.71
SCFD1-224ENST00000557713 RS1O15537 224 aa10.64□□□□□ -0.71
SCFD1-224ENST00000557713 CIDEAO60543 219 aa10.64□□□□□ -0.71
SCFD1-224ENST00000557713 RPL12P30050 165 aaKnown RBP10.64□□□□□ -0.71
SCFD1-224ENST00000557713 ZNF876PQ49A33 203 aa10.64□□□□□ -0.71
SCFD1-224ENST00000557713 CFAP126Q5VTH2 177 aa10.64□□□□□ -0.71
SCFD1-224ENST00000557713 DPPA3Q6W0C5 159 aa10.64□□□□□ -0.71
SCFD1-224ENST00000557713 PQLC2Q6ZP29 291 aa10.64□□□□□ -0.71
SCFD1-224ENST00000557713 S100ZQ8WXG8 99 aa10.64□□□□□ -0.71
SCFD1-224ENST00000557713 ASB13Q8WXK3 278 aa10.64□□□□□ -0.71
SCFD1-224ENST00000557713 WFDC1Q9HC57 220 aa10.64□□□□□ -0.71
SCFD1-224ENST00000557713 UPK1BO75841 260 aa10.63□□□□□ -0.71
SCFD1-224ENST00000557713 GNG5P63218 68 aa10.63□□□□□ -0.71
SCFD1-224ENST00000557713 IFITM3Q01628 133 aa10.63□□□□□ -0.71
SCFD1-224ENST00000557713 OR10J3Q5JRS4 329 aa10.63□□□□□ -0.71
SCFD1-224ENST00000557713 Q6ZSN1 163 aa10.63□□□□□ -0.71
SCFD1-224ENST00000557713 Q9HAA7 133 aa10.63□□□□□ -0.71
SCFD1-224ENST00000557713 FAM30AQ9NZY2 134 aa10.63□□□□□ -0.71
SCFD1-224ENST00000557713 C11orf21Q9P2W6 132 aa10.63□□□□□ -0.71
SCFD1-224ENST00000557713 A0A1W2PPV4 95 aa10.62□□□□□ -0.71
SCFD1-224ENST00000557713 ZNF80P51504 273 aaPredicted RBP10.62□□□□□ -0.71
SCFD1-224ENST00000557713 ACOT6Q3I5F7 207 aaPredicted RBP10.62□□□□□ -0.71
SCFD1-224ENST00000557713 LELP1Q5T871 98 aa10.62□□□□□ -0.71
SCFD1-224ENST00000557713 PRADC1Q9BSG0 188 aa10.62□□□□□ -0.71
SCFD1-224ENST00000557713 MARVELD1Q9BSK0 173 aa10.62□□□□□ -0.71
SCFD1-224ENST00000557713 FLG2Q5D862 2391 aaPredicted RBP10.61□□□□□ -0.71
SCFD1-224ENST00000557713 IGHV3-30P01768 117 aa10.61□□□□□ -0.71
SCFD1-224ENST00000557713 IGHV3-33P01772 117 aa10.61□□□□□ -0.71
SCFD1-224ENST00000557713 C1QBP02746 253 aa10.61□□□□□ -0.71
SCFD1-224ENST00000557713 PET100P0DJ07 73 aa10.61□□□□□ -0.71
SCFD1-224ENST00000557713 IGHV3-30-3P0DP02 117 aa10.61□□□□□ -0.71
SCFD1-224ENST00000557713 IGHV3-30-5P0DP03 117 aa10.61□□□□□ -0.71
SCFD1-224ENST00000557713 RAB2AP61019 212 aa10.61□□□□□ -0.71
SCFD1-224ENST00000557713 RHOHQ15669 191 aa10.61□□□□□ -0.71
SCFD1-224ENST00000557713 PTH2Q96A98 100 aa10.61□□□□□ -0.71
SCFD1-224ENST00000557713 SGK494Q96LW2 274 aa10.61□□□□□ -0.71
SCFD1-224ENST00000557713 C9orf85Q96MD7 179 aa10.61□□□□□ -0.71
SCFD1-224ENST00000557713 IGHV3-73A0A0B4J1V6 119 aa10.6□□□□□ -0.71
SCFD1-224ENST00000557713 PGPEP1LA6NFU8 196 aa10.6□□□□□ -0.71
SCFD1-224ENST00000557713 TAAR5O14804 337 aa10.6□□□□□ -0.71
SCFD1-224ENST00000557713 HMGB3O15347 200 aaKnown RBP10.6□□□□□ -0.71
SCFD1-224ENST00000557713 OR10G9Q8NGN4 311 aa10.6□□□□□ -0.71
SCFD1-224ENST00000557713 OR10G7Q8NGN6 311 aa10.6□□□□□ -0.71
SCFD1-224ENST00000557713 GTSF1LQ9H1H1 148 aa10.6□□□□□ -0.71
SCFD1-224ENST00000557713 SERTM2A0A1B0GWG4 89 aa10.59□□□□□ -0.71
SCFD1-224ENST00000557713 TCRAP04437 139 aa10.59□□□□□ -0.71
SCFD1-224ENST00000557713 LAGE3Q14657 143 aa10.59□□□□□ -0.71
SCFD1-224ENST00000557713 ATP6V0E2Q8NHE4 81 aa10.59□□□□□ -0.71
SCFD1-224ENST00000557713 SUN5Q8TC36 379 aa10.59□□□□□ -0.71
SCFD1-224ENST00000557713 NDFIP1Q9BT67 221 aa10.59□□□□□ -0.71
SCFD1-224ENST00000557713 SSNA1O43805 119 aa10.58□□□□□ -0.72
SCFD1-224ENST00000557713 IGLV2-11P01706 119 aa10.58□□□□□ -0.72
SCFD1-224ENST00000557713 ARL14EPLP0DKL9 152 aa10.58□□□□□ -0.72
SCFD1-224ENST00000557713 MGST1P10620 155 aaKnown RBP10.58□□□□□ -0.72
SCFD1-224ENST00000557713 WFDC2Q14508 124 aa10.58□□□□□ -0.72
SCFD1-224ENST00000557713 ZNF506Q5JVG8 444 aa10.58□□□□□ -0.72
SCFD1-224ENST00000557713 TMEM75Q8N9X5 138 aa10.58□□□□□ -0.72
SCFD1-224ENST00000557713 PSG8Q9UQ74 426 aa10.58□□□□□ -0.72
SCFD1-224ENST00000557713 GCGP01275 180 aa10.57□□□□□ -0.72
SCFD1-224ENST00000557713 STAG3L2P0CL84 134 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms