RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 CGB3P0DN86 165 aa5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 CGB7P0DN87 165 aa5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 NTF3P20783 257 aa5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 MFAP2P55001 183 aa5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 HBBP68871 147 aa5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 KIAA1644Q3SXP7 199 aa5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 SPINK9Q5DT21 86 aa5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 OR4A47Q6IF82 309 aa5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 PRR27Q6MZM9 219 aa5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 FAM19A2Q8N3H0 131 aa5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 Q8N6K4 173 aa5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 UBALD1Q8TB05 177 aa5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 PHLDA1Q8WV24 401 aaPredicted RBP5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 RNF183Q96D59 192 aa5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 FAM167A-AS1Q96KT0 104 aa5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 CSTL1Q9H114 145 aa5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 IFI27L2Q9H2X8 130 aa5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 LINC00574Q9H8X3 128 aa5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 SCRT2Q9NQ03 307 aa5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 IDI2-AS1Q9NZ38 188 aa5.09□□□□□ -1.59
SPTLC2-206ENST00000557566 APOBP04114 4563 aaKnown RBP5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 TRAV34A0A0B4J273 112 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 G3V318 75 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 PEX7O00628 323 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 SIVA1O15304 175 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 CIDEAO60543 219 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 CDK2AP2O75956 126 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 SSTR5P35346 364 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 DIAPH2-AS1Q14236 149 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 FXYD3Q14802 87 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 RBMY1FQ15415 496 aaKnown RBP5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 Q56UQ5 140 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 LINC01545Q5VT33 79 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 GTF2H5Q6ZYL4 71 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 MOB3BQ86TA1 216 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 ZNF575Q86XF7 245 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 THAP8Q8NA92 274 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 VPS25Q9BRG1 176 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 OVOL2Q9BRP0 275 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 MAP1LC3CQ9BXW4 147 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 GNG12Q9UBI6 72 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 HSPB8Q9UJY1 196 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 OR51B2Q9Y5P1 312 aa5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 SRRM2Q9UQ35 2752 aaKnown RBP5.08□□□□□ -1.6
SPTLC2-206ENST00000557566 LRP1BQ9NZR2 4599 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 IGHV3-72A0A0B4J1Y9 119 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 TRAV3A0A0B4J244 114 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 TRAV41A0A0B4J266 112 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 IGHV1-3A0A0C4DH29 117 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 SRRM4A7MD48 611 aaKnown RBP5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 H3BRM9 83 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 TRIAP1O43715 76 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 LEPROTL1O95214 131 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 NUDT3O95989 172 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 MOSP00540 346 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 NBEAP1P0C6P0 100 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 IGLC1P0CG04 106 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 SMIM17P0DL12 118 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 RNASE2P10153 161 aaKnown RBP5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 COX8AP10176 69 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 MGST1P10620 155 aaKnown RBP5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 SCGB1A1P11684 91 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 FOXA3P55318 350 aaPredicted RBP5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 TCL1AP56279 114 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 TCTAP57738 103 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 UBE2L3P68036 154 aaKnown RBP5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 MPV17L2Q567V2 206 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 GDF5OSQ5U4N7 250 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 UFSP1Q6NVU6 142 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 RNASEKQ6P5S7 137 aaKnown RBP5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 Q8N1X5 172 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 OR10X1Q8NGY0 326 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 OR4A5Q8NH83 315 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 FMC1Q96HJ9 113 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 URB1-AS1Q96HZ7 61 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 GPR82Q96P67 336 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 MLST8Q9BVC4 326 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 SLC25A2Q9BXI2 301 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 RPP21Q9H633 154 aaKnown RBP5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 WASHC3Q9Y3C0 194 aa5.07□□□□□ -1.6
SPTLC2-206ENST00000557566 IGHV3-43A0A0B4J1X8 118 aa5.06□□□□□ -1.6
SPTLC2-206ENST00000557566 IGHV1-24A0A0C4DH33 117 aa5.06□□□□□ -1.6
SPTLC2-206ENST00000557566 C19orf71A6NCJ1 209 aa5.06□□□□□ -1.6
SPTLC2-206ENST00000557566 A6NDN8 102 aa5.06□□□□□ -1.6
SPTLC2-206ENST00000557566 HIGD1CA8MV81 97 aa5.06□□□□□ -1.6
SPTLC2-206ENST00000557566 OR11H12B2RN74 326 aa5.06□□□□□ -1.6
SPTLC2-206ENST00000557566 CORTO00230 105 aa5.06□□□□□ -1.6
SPTLC2-206ENST00000557566 ATP6V0E1O15342 81 aa5.06□□□□□ -1.6
SPTLC2-206ENST00000557566 IGHV3-43DP0DP04 118 aa5.06□□□□□ -1.6
SPTLC2-206ENST00000557566 GPR183P32249 361 aa5.06□□□□□ -1.6
SPTLC2-206ENST00000557566 SUB1P53999 127 aaKnown RBP eCLIP5.06□□□□□ -1.6
SPTLC2-206ENST00000557566 RPL8P62917 257 aaKnown RBP5.06□□□□□ -1.6
SPTLC2-206ENST00000557566 PSG9Q00887 426 aa5.06□□□□□ -1.6
SPTLC2-206ENST00000557566 MAJINQ3KP22 176 aa5.06□□□□□ -1.6
SPTLC2-206ENST00000557566 CD300EQ496F6 205 aaPredicted RBP5.06□□□□□ -1.6
SPTLC2-206ENST00000557566 UTF1Q5T230 341 aa5.06□□□□□ -1.6
SPTLC2-206ENST00000557566 PVRIGQ6DKI7 326 aa5.06□□□□□ -1.6
SPTLC2-206ENST00000557566 C16orf54Q6UWD8 224 aa5.06□□□□□ -1.6
SPTLC2-206ENST00000557566 RBPMS2Q6ZRY4 209 aaKnown RBP5.06□□□□□ -1.6
SPTLC2-206ENST00000557566 ATOH7Q8N100 152 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms