RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 SDF2L1Q9HCN8 221 aa10.55□□□□□ -0.72
VIPAS39-210ENST00000557466 MED9Q9NWA0 146 aa10.55□□□□□ -0.72
VIPAS39-210ENST00000557466 MDFICQ9P1T7 246 aa10.55□□□□□ -0.72
VIPAS39-210ENST00000557466 TRAV10A0A0B4J240 114 aa10.54□□□□□ -0.72
VIPAS39-210ENST00000557466 GNRH2O43555 120 aa10.54□□□□□ -0.72
VIPAS39-210ENST00000557466 SH2D1AO60880 128 aa10.54□□□□□ -0.72
VIPAS39-210ENST00000557466 DEFB130BP0DP73 79 aa10.54□□□□□ -0.72
VIPAS39-210ENST00000557466 DEFB130AP0DP74 79 aa10.54□□□□□ -0.72
VIPAS39-210ENST00000557466 DAZ2Q13117 558 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-210ENST00000557466 CENPWQ5EE01 88 aa10.54□□□□□ -0.72
VIPAS39-210ENST00000557466 BAGE2Q86Y30 109 aa10.54□□□□□ -0.72
VIPAS39-210ENST00000557466 LINC00612Q8N6U2 182 aa10.54□□□□□ -0.72
VIPAS39-210ENST00000557466 KCNS1Q96KK3 526 aa10.54□□□□□ -0.72
VIPAS39-210ENST00000557466 FAM210AQ96ND0 272 aa10.54□□□□□ -0.72
VIPAS39-210ENST00000557466 MLST8Q9BVC4 326 aa10.54□□□□□ -0.72
VIPAS39-210ENST00000557466 IGHV3-16A0A0C4DH30 117 aa10.53□□□□□ -0.72
VIPAS39-210ENST00000557466 RAB19A4D1S5 217 aa10.53□□□□□ -0.72
VIPAS39-210ENST00000557466 FABP5P3A8MUU1 101 aa10.53□□□□□ -0.72
VIPAS39-210ENST00000557466 ZNF674Q2M3X9 581 aa10.53□□□□□ -0.72
VIPAS39-210ENST00000557466 FAM162BQ5T6X4 162 aa10.53□□□□□ -0.72
VIPAS39-210ENST00000557466 Q6ZTI0 123 aa10.53□□□□□ -0.72
VIPAS39-210ENST00000557466 TRBV20OR9-2A0A075B6H5 130 aa10.52□□□□□ -0.73
VIPAS39-210ENST00000557466 DEFB131BA0A096LNP1 70 aa10.52□□□□□ -0.73
VIPAS39-210ENST00000557466 IGKV3D-20A0A0C4DH25 116 aa10.52□□□□□ -0.73
VIPAS39-210ENST00000557466 GAGE12BA1L429 117 aa10.52□□□□□ -0.73
VIPAS39-210ENST00000557466 SPINK4O60575 86 aa10.52□□□□□ -0.73
VIPAS39-210ENST00000557466 GAGE7O76087 117 aa10.52□□□□□ -0.73
VIPAS39-210ENST00000557466 GAGE12FP0CL80 117 aa10.52□□□□□ -0.73
VIPAS39-210ENST00000557466 GAGE12GP0CL81 117 aa10.52□□□□□ -0.73
VIPAS39-210ENST00000557466 GAGE12IP0CL82 117 aa10.52□□□□□ -0.73
VIPAS39-210ENST00000557466 EIF5A2Q9GZV4 153 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-210ENST00000557466 MRPL16Q9NX20 251 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-210ENST00000557466 TRGV1A0A0A0MS02 117 aa10.51□□□□□ -0.73
VIPAS39-210ENST00000557466 TMEM250H0YL14 139 aa10.51□□□□□ -0.73
VIPAS39-210ENST00000557466 IGLV2-8P01709 118 aa10.51□□□□□ -0.73
VIPAS39-210ENST00000557466 HTN3P15516 51 aa10.51□□□□□ -0.73
VIPAS39-210ENST00000557466 GNG4P50150 75 aa10.51□□□□□ -0.73
VIPAS39-210ENST00000557466 PARLQ9H300 379 aa10.51□□□□□ -0.73
VIPAS39-210ENST00000557466 KLK5Q9Y337 293 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-210ENST00000557466 PGPEP1LA6NFU8 196 aa10.5□□□□□ -0.73
VIPAS39-210ENST00000557466 M0R036 132 aa10.5□□□□□ -0.73
VIPAS39-210ENST00000557466 ORM1P02763 201 aa10.5□□□□□ -0.73
VIPAS39-210ENST00000557466 IFITM2Q01629 132 aa10.5□□□□□ -0.73
VIPAS39-210ENST00000557466 PRR27Q6MZM9 219 aa10.5□□□□□ -0.73
VIPAS39-210ENST00000557466 STARD9Q9P2P6 4700 aa10.5□□□□□ -0.73
VIPAS39-210ENST00000557466 B4DEV8 164 aa10.49□□□□□ -0.73
VIPAS39-210ENST00000557466 KRBOX1C9JBD0 128 aa10.49□□□□□ -0.73
VIPAS39-210ENST00000557466 ATP5G1P05496 136 aa10.49□□□□□ -0.73
VIPAS39-210ENST00000557466 SRP19P09132 144 aaKnown RBP10.49□□□□□ -0.73
VIPAS39-210ENST00000557466 MGST1P10620 155 aaKnown RBP10.49□□□□□ -0.73
VIPAS39-210ENST00000557466 LINC01559Q495D7 138 aa10.49□□□□□ -0.73
VIPAS39-210ENST00000557466 SMIM12Q96EX1 92 aa10.49□□□□□ -0.73
VIPAS39-210ENST00000557466 C9orf85Q96MD7 179 aa10.49□□□□□ -0.73
VIPAS39-210ENST00000557466 SPXQ9BT56 116 aa10.49□□□□□ -0.73
VIPAS39-210ENST00000557466 KMT2CQ8NEZ4 4911 aaKnown RBP10.48□□□□□ -0.73
VIPAS39-210ENST00000557466 MUC4Q99102 2169 aa10.48□□□□□ -0.73
VIPAS39-210ENST00000557466 CSMD3Q7Z407 3707 aa10.48□□□□□ -0.73
VIPAS39-210ENST00000557466 TMSB15BA0A087X1C1 80 aa10.48□□□□□ -0.73
VIPAS39-210ENST00000557466 IGLL5B9A064 214 aa10.48□□□□□ -0.73
VIPAS39-210ENST00000557466 C9JCJ5 164 aa10.48□□□□□ -0.73
VIPAS39-210ENST00000557466 NDUFS6O75380 124 aaKnown RBP10.48□□□□□ -0.73
VIPAS39-210ENST00000557466 RNASE3P12724 160 aaKnown RBP10.48□□□□□ -0.73
VIPAS39-210ENST00000557466 CEBPGP53567 150 aa10.48□□□□□ -0.73
VIPAS39-210ENST00000557466 LGALS9BQ3B8N2 356 aa10.48□□□□□ -0.73
VIPAS39-210ENST00000557466 TRGV2A0A075B6R0 118 aa10.47□□□□□ -0.73
VIPAS39-210ENST00000557466 IGHV4-4A0A075B6R2 117 aa10.47□□□□□ -0.73
VIPAS39-210ENST00000557466 M0R2P5 195 aa10.47□□□□□ -0.73
VIPAS39-210ENST00000557466 ASIPP42127 132 aa10.47□□□□□ -0.73
VIPAS39-210ENST00000557466 RPL19P84098 196 aaKnown RBP10.47□□□□□ -0.73
VIPAS39-210ENST00000557466 SRSF3P84103 164 aaKnown RBP10.47□□□□□ -0.73
VIPAS39-210ENST00000557466 C18orf15Q96N68 181 aa10.47□□□□□ -0.73
VIPAS39-210ENST00000557466 NACAE9PAV3 2078 aa10.46□□□□□ -0.73
VIPAS39-210ENST00000557466 GRIFINA4D1Z8 144 aa10.46□□□□□ -0.73
VIPAS39-210ENST00000557466 F5H768 121 aa10.46□□□□□ -0.73
VIPAS39-210ENST00000557466 H3BVH4 76 aa10.46□□□□□ -0.73
VIPAS39-210ENST00000557466 RAB14P61106 215 aa10.46□□□□□ -0.73
VIPAS39-210ENST00000557466 OR5I1Q13606 314 aa10.46□□□□□ -0.73
VIPAS39-210ENST00000557466 DNLZQ5SXM8 178 aa10.46□□□□□ -0.73
VIPAS39-210ENST00000557466 ZNF575Q86XF7 245 aa10.46□□□□□ -0.73
VIPAS39-210ENST00000557466 C9JQL5 133 aa10.45□□□□□ -0.74
VIPAS39-210ENST00000557466 HOXA5P20719 270 aa10.45□□□□□ -0.74
VIPAS39-210ENST00000557466 S100A4P26447 101 aaKnown RBP10.45□□□□□ -0.74
VIPAS39-210ENST00000557466 TMEM88Q6PEY1 159 aa10.45□□□□□ -0.74
VIPAS39-210ENST00000557466 RASL10AQ92737 203 aa10.45□□□□□ -0.74
VIPAS39-210ENST00000557466 SMIM7Q9BQ49 75 aa10.45□□□□□ -0.74
VIPAS39-210ENST00000557466 APLNQ9ULZ1 77 aa10.45□□□□□ -0.74
VIPAS39-210ENST00000557466 C19orf71A6NCJ1 209 aa10.44□□□□□ -0.74
VIPAS39-210ENST00000557466 K7EN84 100 aa10.44□□□□□ -0.74
VIPAS39-210ENST00000557466 IGHV3-53P01767 116 aa10.44□□□□□ -0.74
VIPAS39-210ENST00000557466 CLLU1Q5K131 121 aa10.44□□□□□ -0.74
VIPAS39-210ENST00000557466 OCC1Q8TAD7 63 aa10.44□□□□□ -0.74
VIPAS39-210ENST00000557466 IL36BQ9NZH7 164 aa10.44□□□□□ -0.74
VIPAS39-210ENST00000557466 DYNC2H1Q8NCM8 4307 aaKnown RBP10.43□□□□□ -0.74
VIPAS39-210ENST00000557466 CXCL1P09341 107 aa10.43□□□□□ -0.74
VIPAS39-210ENST00000557466 ARMS2P0C7Q2 107 aa10.43□□□□□ -0.74
VIPAS39-210ENST00000557466 TCTAP57738 103 aa10.43□□□□□ -0.74
VIPAS39-210ENST00000557466 PEA15Q15121 130 aa10.43□□□□□ -0.74
VIPAS39-210ENST00000557466 POM121L12Q8N7R1 296 aa10.43□□□□□ -0.74
VIPAS39-210ENST00000557466 FAM210BQ96KR6 192 aa10.43□□□□□ -0.74
VIPAS39-210ENST00000557466 BIN3Q9NQY0 253 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms