RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 WFDC12Q8WWY7 111 aa13.46□□□□□ -0.25
XRCC3-218ENST00000557439 SMIM17P0DL12 118 aa13.46□□□□□ -0.26
XRCC3-218ENST00000557439 Q8N8P6 123 aa13.46□□□□□ -0.26
XRCC3-218ENST00000557439 DOPEY2Q9Y3R5 2298 aa13.46□□□□□ -0.26
XRCC3-218ENST00000557439 DPF1Q92782 380 aa13.45□□□□□ -0.26
XRCC3-218ENST00000557439 PF4V1P10720 104 aa13.45□□□□□ -0.26
XRCC3-218ENST00000557439 TMEM160Q9NX00 188 aa13.45□□□□□ -0.26
XRCC3-218ENST00000557439 H3BUT2 72 aa13.44□□□□□ -0.26
XRCC3-218ENST00000557439 TMEM95Q3KNT9 176 aa13.44□□□□□ -0.26
XRCC3-218ENST00000557439 TMEM8BA6NDV4 472 aa13.44□□□□□ -0.26
XRCC3-218ENST00000557439 ZFAND2AQ8N6M9 145 aa13.44□□□□□ -0.26
XRCC3-218ENST00000557439 PPP1R14DQ9NXH3 145 aa13.44□□□□□ -0.26
XRCC3-218ENST00000557439 CBY1Q9Y3M2 126 aa13.44□□□□□ -0.26
XRCC3-218ENST00000557439 USP9XQ93008 2570 aaPredicted RBP13.44□□□□□ -0.26
XRCC3-218ENST00000557439 ZANQ9Y493 2812 aa13.44□□□□□ -0.26
XRCC3-218ENST00000557439 LINC01546A6NGU7 62 aa13.43□□□□□ -0.26
XRCC3-218ENST00000557439 ZC2HC1BQ5TFG8 222 aa13.43□□□□□ -0.26
XRCC3-218ENST00000557439 MRPL35Q9NZE8 188 aaKnown RBP13.43□□□□□ -0.26
XRCC3-218ENST00000557439 PEF1Q9UBV8 284 aaKnown RBP13.43□□□□□ -0.26
XRCC3-218ENST00000557439 IGHV4-30-2A0A087WSY4 118 aa13.43□□□□□ -0.26
XRCC3-218ENST00000557439 FAM223BA6NKX1 122 aa13.43□□□□□ -0.26
XRCC3-218ENST00000557439 SMIM15Q7Z3B0 74 aa13.43□□□□□ -0.26
XRCC3-218ENST00000557439 FAM223AQ8IWN6 122 aa13.43□□□□□ -0.26
XRCC3-218ENST00000557439 HIF1ANQ9NWT6 349 aa13.43□□□□□ -0.26
XRCC3-218ENST00000557439 GNRH2O43555 120 aa13.42□□□□□ -0.26
XRCC3-218ENST00000557439 IGKCP01834 107 aa13.42□□□□□ -0.26
XRCC3-218ENST00000557439 RNASE4P34096 147 aaKnown RBP13.42□□□□□ -0.26
XRCC3-218ENST00000557439 SEC11AP67812 179 aa13.42□□□□□ -0.26
XRCC3-218ENST00000557439 C14orf178Q8N769 122 aaPredicted RBP13.42□□□□□ -0.26
XRCC3-218ENST00000557439 NRGNQ92686 78 aa13.42□□□□□ -0.26
XRCC3-218ENST00000557439 RPL39LQ96EH5 51 aaKnown RBP13.42□□□□□ -0.26
XRCC3-218ENST00000557439 MRPL53Q96EL3 112 aaKnown RBP13.42□□□□□ -0.26
XRCC3-218ENST00000557439 ANXA2RQ3ZCQ2 193 aa13.42□□□□□ -0.26
XRCC3-218ENST00000557439 C9orf139Q6ZV77 190 aa13.42□□□□□ -0.26
XRCC3-218ENST00000557439 HSD52Q0P140 79 aa13.41□□□□□ -0.26
XRCC3-218ENST00000557439 OR4X2Q8NGF9 303 aa13.41□□□□□ -0.26
XRCC3-218ENST00000557439 CST9LQ9H4G1 147 aa13.41□□□□□ -0.26
XRCC3-218ENST00000557439 ZMAT4Q9H898 229 aa13.41□□□□□ -0.26
XRCC3-218ENST00000557439 SOCS3O14543 225 aa13.41□□□□□ -0.26
XRCC3-218ENST00000557439 AVPP01185 164 aa13.41□□□□□ -0.26
XRCC3-218ENST00000557439 PCP4P48539 62 aa13.41□□□□□ -0.26
XRCC3-218ENST00000557439 LAGE3Q14657 143 aa13.41□□□□□ -0.26
XRCC3-218ENST00000557439 OR9G4Q8NGQ1 327 aa13.41□□□□□ -0.26
XRCC3-218ENST00000557439 POLQO75417 2590 aa13.41□□□□□ -0.26
XRCC3-218ENST00000557439 SORL1Q92673 2214 aa13.41□□□□□ -0.26
XRCC3-218ENST00000557439 GCSHP23434 173 aa13.4□□□□□ -0.26
XRCC3-218ENST00000557439 S100A4P26447 101 aaKnown RBP13.4□□□□□ -0.26
XRCC3-218ENST00000557439 CCL19Q99731 98 aa13.4□□□□□ -0.26
XRCC3-218ENST00000557439 PIMREGQ9BSJ6 248 aa13.4□□□□□ -0.26
XRCC3-218ENST00000557439 PRORYQ9H606 182 aa13.4□□□□□ -0.26
XRCC3-218ENST00000557439 GAGE12BA1L429 117 aa13.4□□□□□ -0.26
XRCC3-218ENST00000557439 FXYD2P54710 66 aa13.4□□□□□ -0.26
XRCC3-218ENST00000557439 OR10J6PQ8NGY7 276 aa13.4□□□□□ -0.26
XRCC3-218ENST00000557439 MUC4Q99102 2169 aa13.4□□□□□ -0.26
XRCC3-218ENST00000557439 CENPEQ02224 2701 aa13.4□□□□□ -0.27
XRCC3-218ENST00000557439 K7ERJ3 54 aa13.39□□□□□ -0.27
XRCC3-218ENST00000557439 NDUFA4O00483 81 aa13.39□□□□□ -0.27
XRCC3-218ENST00000557439 MGPP08493 103 aa13.39□□□□□ -0.27
XRCC3-218ENST00000557439 C10orf99Q6UWK7 81 aa13.39□□□□□ -0.27
XRCC3-218ENST00000557439 NEGR1Q7Z3B1 354 aa13.39□□□□□ -0.27
XRCC3-218ENST00000557439 MAPKAPK5-AS1Q8N8E1 139 aa13.39□□□□□ -0.27
XRCC3-218ENST00000557439 C10orf105Q8TEF2 133 aa13.39□□□□□ -0.27
XRCC3-218ENST00000557439 NPFFR1Q9GZQ6 430 aa13.39□□□□□ -0.27
XRCC3-218ENST00000557439 USP9YO00507 2555 aaPredicted RBP13.39□□□□□ -0.27
XRCC3-218ENST00000557439 A6NDN8 102 aa13.38□□□□□ -0.27
XRCC3-218ENST00000557439 GAGE10A6NGK3 116 aa13.38□□□□□ -0.27
XRCC3-218ENST00000557439 DPM2O94777 84 aa13.38□□□□□ -0.27
XRCC3-218ENST00000557439 ATP5J2P56134 94 aa13.38□□□□□ -0.27
XRCC3-218ENST00000557439 PIEZO1Q92508 2521 aa13.38□□□□□ -0.27
XRCC3-218ENST00000557439 RHPN1-AS1Q9BWJ2 59 aa13.38□□□□□ -0.27
XRCC3-218ENST00000557439 AGRNO00468 2067 aa13.38□□□□□ -0.27
XRCC3-218ENST00000557439 C9orf118A6NHY6 69 aa13.38□□□□□ -0.27
XRCC3-218ENST00000557439 MYOZ3Q8TDC0 251 aa13.38□□□□□ -0.27
XRCC3-218ENST00000557439 RASL10AQ92737 203 aa13.38□□□□□ -0.27
XRCC3-218ENST00000557439 AP1S3Q96PC3 154 aa13.38□□□□□ -0.27
XRCC3-218ENST00000557439 MEGF9Q9H1U4 602 aa13.38□□□□□ -0.27
XRCC3-218ENST00000557439 A0A0G2JLM5 398 aa13.37□□□□□ -0.27
XRCC3-218ENST00000557439 H3BRM9 83 aa13.37□□□□□ -0.27
XRCC3-218ENST00000557439 IGHG2P01859 326 aa13.37□□□□□ -0.27
XRCC3-218ENST00000557439 IGHV4-4A0A075B6R2 117 aa13.37□□□□□ -0.27
XRCC3-218ENST00000557439 CRIP2P52943 208 aaPredicted RBP13.37□□□□□ -0.27
XRCC3-218ENST00000557439 SMIM2Q9BVW6 85 aa13.37□□□□□ -0.27
XRCC3-218ENST00000557439 PHLDA3Q9Y5J5 127 aa13.37□□□□□ -0.27
XRCC3-218ENST00000557439 TRBV25-1A0A075B6N4 114 aa13.36□□□□□ -0.27
XRCC3-218ENST00000557439 A6NDX4 124 aa13.36□□□□□ -0.27
XRCC3-218ENST00000557439 LINC00477Q96M19 166 aa13.36□□□□□ -0.27
XRCC3-218ENST00000557439 CHAC1Q9BUX1 264 aa13.36□□□□□ -0.27
XRCC3-218ENST00000557439 IGSF10Q6WRI0 2623 aa13.36□□□□□ -0.27
XRCC3-218ENST00000557439 TRAV21A0A0B4J279 112 aa13.36□□□□□ -0.27
XRCC3-218ENST00000557439 OCIAD2Q56VL3 154 aa13.36□□□□□ -0.27
XRCC3-218ENST00000557439 JPT2Q9H910 190 aa13.36□□□□□ -0.27
XRCC3-218ENST00000557439 SIVA1O15304 175 aa13.35□□□□□ -0.27
XRCC3-218ENST00000557439 SAP30O75446 220 aa13.35□□□□□ -0.27
XRCC3-218ENST00000557439 ATP5LO75964 103 aa13.35□□□□□ -0.27
XRCC3-218ENST00000557439 ASIPP42127 132 aa13.35□□□□□ -0.27
XRCC3-218ENST00000557439 SRSF1Q07955 248 aaKnown RBP eCLIP13.35□□□□□ -0.27
XRCC3-218ENST00000557439 MYO18BQ8IUG5 2567 aa13.35□□□□□ -0.27
XRCC3-218ENST00000557439 RNASE3P12724 160 aaKnown RBP13.34□□□□□ -0.27
XRCC3-218ENST00000557439 CLEC2AQ6UVW9 174 aa13.34□□□□□ -0.27
XRCC3-218ENST00000557439 MAPK1IP1LQ8NDC0 245 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms