RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 IGHV3-30P01768 117 aa9.42□□□□□ -0.9
SLIRP-210ENST00000557431 IGHV3-33P01772 117 aa9.42□□□□□ -0.9
SLIRP-210ENST00000557431 IGHV3-30-3P0DP02 117 aa9.42□□□□□ -0.9
SLIRP-210ENST00000557431 IGHV3-30-5P0DP03 117 aa9.42□□□□□ -0.9
SLIRP-210ENST00000557431 WFDC2Q14508 124 aa9.42□□□□□ -0.9
SLIRP-210ENST00000557431 RASL10AQ92737 203 aa9.42□□□□□ -0.9
SLIRP-210ENST00000557431 SMIM3Q9BZL3 60 aa9.42□□□□□ -0.9
SLIRP-210ENST00000557431 WFDC1Q9HC57 220 aa9.42□□□□□ -0.9
SLIRP-210ENST00000557431 TRAV4A0A0B4J268 109 aa9.41□□□□□ -0.9
SLIRP-210ENST00000557431 C9JCJ5 164 aa9.41□□□□□ -0.9
SLIRP-210ENST00000557431 F6UZH7 168 aa9.41□□□□□ -0.9
SLIRP-210ENST00000557431 ORM1P02763 201 aa9.41□□□□□ -0.9
SLIRP-210ENST00000557431 GIPP09681 153 aaPredicted RBP9.41□□□□□ -0.9
SLIRP-210ENST00000557431 PPT1P50897 306 aa9.41□□□□□ -0.9
SLIRP-210ENST00000557431 Q6AWC8 147 aa9.41□□□□□ -0.9
SLIRP-210ENST00000557431 FAM159AQ6UWV7 190 aa9.41□□□□□ -0.9
SLIRP-210ENST00000557431 IQCF2Q8IXL9 164 aa9.41□□□□□ -0.9
SLIRP-210ENST00000557431 Q8N3U1 123 aa9.41□□□□□ -0.9
SLIRP-210ENST00000557431 OR4C5Q8NGB2 326 aa9.41□□□□□ -0.9
SLIRP-210ENST00000557431 SCGB1C1Q8TD33 95 aa9.41□□□□□ -0.9
SLIRP-210ENST00000557431 ASB13Q8WXK3 278 aa9.41□□□□□ -0.9
SLIRP-210ENST00000557431 HYLS1Q96M11 299 aa9.41□□□□□ -0.9
SLIRP-210ENST00000557431 TXNDC17Q9BRA2 123 aa9.41□□□□□ -0.9
SLIRP-210ENST00000557431 SRRM2Q9UQ35 2752 aaKnown RBP9.41□□□□□ -0.9
SLIRP-210ENST00000557431 TRGV11A0A075B6L2 103 aa9.4□□□□□ -0.9
SLIRP-210ENST00000557431 IGHV3-38A0A0C4DH36 116 aa9.4□□□□□ -0.9
SLIRP-210ENST00000557431 DIRC3C9JPN6 131 aa9.4□□□□□ -0.9
SLIRP-210ENST00000557431 TYMSP04818 313 aa9.4□□□□□ -0.9
SLIRP-210ENST00000557431 UBE2L3P68036 154 aaKnown RBP9.4□□□□□ -0.9
SLIRP-210ENST00000557431 Q5BKY6 102 aa9.4□□□□□ -0.9
SLIRP-210ENST00000557431 Q8N814 137 aa9.4□□□□□ -0.9
SLIRP-210ENST00000557431 SPXQ9BT56 116 aa9.4□□□□□ -0.9
SLIRP-210ENST00000557431 TMEM70Q9BUB7 260 aa9.4□□□□□ -0.9
SLIRP-210ENST00000557431 IGHV3-73A0A0B4J1V6 119 aa9.39□□□□□ -0.91
SLIRP-210ENST00000557431 CSN1S1P47710 185 aa9.39□□□□□ -0.91
SLIRP-210ENST00000557431 C10orf126Q8N4M7 172 aa9.39□□□□□ -0.91
SLIRP-210ENST00000557431 AQP10Q96PS8 301 aa9.39□□□□□ -0.91
SLIRP-210ENST00000557431 TRAV8-1A0A0A6YYK1 113 aa9.38□□□□□ -0.91
SLIRP-210ENST00000557431 RBAKDNA6NC62 111 aa9.38□□□□□ -0.91
SLIRP-210ENST00000557431 LECT2O14960 151 aa9.38□□□□□ -0.91
SLIRP-210ENST00000557431 GATA1P15976 413 aaPredicted RBP9.38□□□□□ -0.91
SLIRP-210ENST00000557431 OR10J3Q5JRS4 329 aa9.38□□□□□ -0.91
SLIRP-210ENST00000557431 FFAR4Q5NUL3 377 aa9.38□□□□□ -0.91
SLIRP-210ENST00000557431 TVP23CQ96ET8 276 aa9.38□□□□□ -0.91
SLIRP-210ENST00000557431 SGK494Q96LW2 274 aa9.38□□□□□ -0.91
SLIRP-210ENST00000557431 TRBV7-9A0A0J9YWB2 115 aa9.37□□□□□ -0.91
SLIRP-210ENST00000557431 IBA57-AS1B1ANH7 110 aa9.37□□□□□ -0.91
SLIRP-210ENST00000557431 M0R2P5 195 aa9.37□□□□□ -0.91
SLIRP-210ENST00000557431 GNG5P63218 68 aa9.37□□□□□ -0.91
SLIRP-210ENST00000557431 LINC01620Q4KN68 170 aa9.37□□□□□ -0.91
SLIRP-210ENST00000557431 LINC01556Q5JQF7 62 aa9.37□□□□□ -0.91
SLIRP-210ENST00000557431 DPPA3Q6W0C5 159 aa9.37□□□□□ -0.91
SLIRP-210ENST00000557431 NTN5Q8WTR8 489 aaPredicted RBP9.37□□□□□ -0.91
SLIRP-210ENST00000557431 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.36□□□□□ -0.91
SLIRP-210ENST00000557431 K7EP13 123 aa9.36□□□□□ -0.91
SLIRP-210ENST00000557431 GOLT1AQ6ZVE7 132 aa9.36□□□□□ -0.91
SLIRP-210ENST00000557431 SLC25A29Q8N8R3 303 aa9.36□□□□□ -0.91
SLIRP-210ENST00000557431 OR2T35Q8NGX2 323 aa9.36□□□□□ -0.91
SLIRP-210ENST00000557431 PGPA6NDG6 321 aa9.35□□□□□ -0.91
SLIRP-210ENST00000557431 LINC00528Q8N1L1 170 aa9.35□□□□□ -0.91
SLIRP-210ENST00000557431 TMEM75Q8N9X5 138 aa9.35□□□□□ -0.91
SLIRP-210ENST00000557431 TNFSF18Q9UNG2 199 aa9.35□□□□□ -0.91
SLIRP-210ENST00000557431 FXYD6-FXYD2A0A087WZ82 144 aa9.34□□□□□ -0.91
SLIRP-210ENST00000557431 TRAV8-6A0A0B4J262 113 aa9.34□□□□□ -0.91
SLIRP-210ENST00000557431 RNF222A6NCQ9 220 aa9.34□□□□□ -0.91
SLIRP-210ENST00000557431 FBLL1A6NHQ2 334 aaKnown RBP9.34□□□□□ -0.91
SLIRP-210ENST00000557431 G3V3Q6 166 aa9.34□□□□□ -0.91
SLIRP-210ENST00000557431 HMGB3O15347 200 aaKnown RBP9.34□□□□□ -0.91
SLIRP-210ENST00000557431 ACOT6Q3I5F7 207 aaPredicted RBP9.34□□□□□ -0.91
SLIRP-210ENST00000557431 TDRG1Q3Y452 100 aa9.34□□□□□ -0.91
SLIRP-210ENST00000557431 INO80EQ8NBZ0 244 aaPredicted RBP9.34□□□□□ -0.91
SLIRP-210ENST00000557431 C11orf21Q9P2W6 132 aa9.34□□□□□ -0.91
SLIRP-210ENST00000557431 LRP1Q07954 4544 aaKnown RBP9.34□□□□□ -0.91
SLIRP-210ENST00000557431 TRAV21A0A0B4J279 112 aa9.33□□□□□ -0.92
SLIRP-210ENST00000557431 ZNF80P51504 273 aaPredicted RBP9.33□□□□□ -0.92
SLIRP-210ENST00000557431 TAS2R45P59539 299 aa9.33□□□□□ -0.92
SLIRP-210ENST00000557431 KHDC3LQ587J8 217 aa9.33□□□□□ -0.92
SLIRP-210ENST00000557431 CFAP126Q5VTH2 177 aa9.33□□□□□ -0.92
SLIRP-210ENST00000557431 HSD17B11Q8NBQ5 300 aa9.33□□□□□ -0.92
SLIRP-210ENST00000557431 PSMG3Q9BT73 122 aaPredicted RBP9.33□□□□□ -0.92
SLIRP-210ENST00000557431 SDF2L1Q9HCN8 221 aa9.33□□□□□ -0.92
SLIRP-210ENST00000557431 TREM1Q9NP99 234 aa9.33□□□□□ -0.92
SLIRP-210ENST00000557431 OTORQ9NRC9 128 aa9.33□□□□□ -0.92
SLIRP-210ENST00000557431 LENEPQ9Y5L5 61 aa9.33□□□□□ -0.92
SLIRP-210ENST00000557431 A0A1W2PPV4 95 aa9.32□□□□□ -0.92
SLIRP-210ENST00000557431 RS1O15537 224 aa9.32□□□□□ -0.92
SLIRP-210ENST00000557431 ATP6V0CP27449 155 aa9.32□□□□□ -0.92
SLIRP-210ENST00000557431 TIRAPP58753 221 aa9.32□□□□□ -0.92
SLIRP-210ENST00000557431 RAB2AP61019 212 aa9.32□□□□□ -0.92
SLIRP-210ENST00000557431 ZNF876PQ49A33 203 aa9.32□□□□□ -0.92
SLIRP-210ENST00000557431 OR10G9Q8NGN4 311 aa9.32□□□□□ -0.92
SLIRP-210ENST00000557431 OR10G7Q8NGN6 311 aa9.32□□□□□ -0.92
SLIRP-210ENST00000557431 OR2G3Q8NGZ4 309 aa9.32□□□□□ -0.92
SLIRP-210ENST00000557431 CMTM2Q8TAZ6 248 aa9.32□□□□□ -0.92
SLIRP-210ENST00000557431 DNAJC30Q96LL9 226 aa9.32□□□□□ -0.92
SLIRP-210ENST00000557431 PGPEP1LA6NFU8 196 aa9.31□□□□□ -0.92
SLIRP-210ENST00000557431 SERF2P84101 59 aa9.31□□□□□ -0.92
SLIRP-210ENST00000557431 RHOHQ15669 191 aa9.31□□□□□ -0.92
SLIRP-210ENST00000557431 LELP1Q5T871 98 aa9.31□□□□□ -0.92
SLIRP-210ENST00000557431 RPL7L1Q6DKI1 246 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms