RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 J3KRW8 73 aa17.15■□□□□ 0.34
RCCD1-208ENST00000557266 LCNL1Q6ZST4 164 aa17.15■□□□□ 0.34
RCCD1-208ENST00000557266 LINC00477Q96M19 166 aa17.15■□□□□ 0.34
RCCD1-208ENST00000557266 PF4V1P10720 104 aa17.14■□□□□ 0.33
RCCD1-208ENST00000557266 OR4X2Q8NGF9 303 aa17.14■□□□□ 0.33
RCCD1-208ENST00000557266 TMEM158Q8WZ71 300 aa17.14■□□□□ 0.33
RCCD1-208ENST00000557266 ODF1Q14990 250 aa17.13■□□□□ 0.33
RCCD1-208ENST00000557266 OR10J6PQ8NGY7 276 aa17.13■□□□□ 0.33
RCCD1-208ENST00000557266 SPG11Q96JI7 2443 aa17.13■□□□□ 0.33
RCCD1-208ENST00000557266 LRRK2Q5S007 2527 aa17.13■□□□□ 0.33
RCCD1-208ENST00000557266 MAP1AP78559 2803 aaPredicted RBP17.13■□□□□ 0.33
RCCD1-208ENST00000557266 OVOL1O14753 267 aa17.12■□□□□ 0.33
RCCD1-208ENST00000557266 CD5LO43866 347 aa17.12■□□□□ 0.33
RCCD1-208ENST00000557266 PRSS47A8MTI9 375 aa17.12■□□□□ 0.33
RCCD1-208ENST00000557266 TMEM97Q5BJF2 176 aa17.12■□□□□ 0.33
RCCD1-208ENST00000557266 CELSR2Q9HCU4 2923 aa17.12■□□□□ 0.33
RCCD1-208ENST00000557266 AVPP01185 164 aa17.11■□□□□ 0.33
RCCD1-208ENST00000557266 IGLV1-40P01703 118 aa17.11■□□□□ 0.33
RCCD1-208ENST00000557266 VAMP3Q15836 100 aa17.11■□□□□ 0.33
RCCD1-208ENST00000557266 ZMAT4Q9H898 229 aa17.11■□□□□ 0.33
RCCD1-208ENST00000557266 UTP20O75691 2785 aaKnown RBP17.11■□□□□ 0.33
RCCD1-208ENST00000557266 CBY3A6NI87 242 aa17.1■□□□□ 0.33
RCCD1-208ENST00000557266 RPL11P62913 178 aaKnown RBP17.1■□□□□ 0.33
RCCD1-208ENST00000557266 PCP2Q8IVA1 136 aa17.1■□□□□ 0.33
RCCD1-208ENST00000557266 FAM19A4Q96LR4 140 aa17.1■□□□□ 0.33
RCCD1-208ENST00000557266 TRAV21A0A0B4J279 112 aa17.09■□□□□ 0.33
RCCD1-208ENST00000557266 CRYBG3Q68DQ2 2970 aa17.09■□□□□ 0.33
RCCD1-208ENST00000557266 F6UB75 175 aa17.09■□□□□ 0.33
RCCD1-208ENST00000557266 NMUP48645 174 aa17.09■□□□□ 0.33
RCCD1-208ENST00000557266 CFHR3Q02985 330 aa17.09■□□□□ 0.33
RCCD1-208ENST00000557266 TM4SF20Q53R12 229 aa17.09■□□□□ 0.33
RCCD1-208ENST00000557266 RHPN1-AS1Q9BWJ2 59 aa17.09■□□□□ 0.33
RCCD1-208ENST00000557266 IGKV3-7A0A075B6H7 116 aa17.08■□□□□ 0.33
RCCD1-208ENST00000557266 SPRY2O43597 315 aa17.08■□□□□ 0.33
RCCD1-208ENST00000557266 PRSS1P07477 247 aa17.08■□□□□ 0.33
RCCD1-208ENST00000557266 SMIM17P0DL12 118 aa17.08■□□□□ 0.33
RCCD1-208ENST00000557266 OR9G4Q8NGQ1 327 aa17.08■□□□□ 0.33
RCCD1-208ENST00000557266 SEC11AP67812 179 aa17.08■□□□□ 0.32
RCCD1-208ENST00000557266 LAGE3Q14657 143 aa17.08■□□□□ 0.32
RCCD1-208ENST00000557266 HHLA3Q9XRX5 114 aa17.08■□□□□ 0.32
RCCD1-208ENST00000557266 SELENOKQ9Y6D0 94 aa17.08■□□□□ 0.32
RCCD1-208ENST00000557266 A0A0G2JLM5 398 aa17.07■□□□□ 0.32
RCCD1-208ENST00000557266 A1L4Q6 167 aa17.07■□□□□ 0.32
RCCD1-208ENST00000557266 MRAP2Q96G30 205 aa17.07■□□□□ 0.32
RCCD1-208ENST00000557266 FOXC2Q99958 501 aa17.07■□□□□ 0.32
RCCD1-208ENST00000557266 SIVA1O15304 175 aa17.06■□□□□ 0.32
RCCD1-208ENST00000557266 ADAMTSL5Q6ZMM2 481 aa17.06■□□□□ 0.32
RCCD1-208ENST00000557266 DAZ1Q9NQZ3 744 aaKnown RBP17.06■□□□□ 0.32
RCCD1-208ENST00000557266 B4DSR2 109 aa17.06■□□□□ 0.32
RCCD1-208ENST00000557266 M0R381 172 aa17.06■□□□□ 0.32
RCCD1-208ENST00000557266 KIR3DS1Q14943 382 aa17.06■□□□□ 0.32
RCCD1-208ENST00000557266 ANXA2RQ3ZCQ2 193 aa17.06■□□□□ 0.32
RCCD1-208ENST00000557266 EDN2P20800 178 aa17.05■□□□□ 0.32
RCCD1-208ENST00000557266 APRG1Q8IVJ8 170 aa17.05■□□□□ 0.32
RCCD1-208ENST00000557266 IGKV2D-26A0A0A0MRZ7 120 aa17.05■□□□□ 0.32
RCCD1-208ENST00000557266 C7orf71A4D174 169 aa17.05■□□□□ 0.32
RCCD1-208ENST00000557266 COX6B1P14854 86 aa17.05■□□□□ 0.32
RCCD1-208ENST00000557266 RNASE4P34096 147 aaKnown RBP17.05■□□□□ 0.32
RCCD1-208ENST00000557266 ASIPP42127 132 aa17.05■□□□□ 0.32
RCCD1-208ENST00000557266 TMEM95Q3KNT9 176 aa17.05■□□□□ 0.32
RCCD1-208ENST00000557266 OR4C5Q8NGB2 326 aa17.05■□□□□ 0.32
RCCD1-208ENST00000557266 ATP5LO75964 103 aa17.04■□□□□ 0.32
RCCD1-208ENST00000557266 IGKCP01834 107 aa17.04■□□□□ 0.32
RCCD1-208ENST00000557266 S100A4P26447 101 aaKnown RBP17.04■□□□□ 0.32
RCCD1-208ENST00000557266 HSD52Q0P140 79 aa17.03■□□□□ 0.32
RCCD1-208ENST00000557266 AMMECR1LQ6DCA0 310 aa17.03■□□□□ 0.32
RCCD1-208ENST00000557266 NRGNQ92686 78 aa17.03■□□□□ 0.32
RCCD1-208ENST00000557266 SMPXQ9UHP9 88 aa17.03■□□□□ 0.32
RCCD1-208ENST00000557266 SRD5A1P18405 259 aa17.03■□□□□ 0.32
RCCD1-208ENST00000557266 SMIM2Q9BVW6 85 aa17.03■□□□□ 0.32
RCCD1-208ENST00000557266 TRAV8-6A0A0B4J262 113 aa17.02■□□□□ 0.32
RCCD1-208ENST00000557266 DPM2O94777 84 aa17.02■□□□□ 0.31
RCCD1-208ENST00000557266 PLA2G2AP14555 144 aa17.02■□□□□ 0.31
RCCD1-208ENST00000557266 PSMG4Q5JS54 123 aa17.02■□□□□ 0.31
RCCD1-208ENST00000557266 PEF1Q9UBV8 284 aaKnown RBP17.02■□□□□ 0.31
RCCD1-208ENST00000557266 PHLDA3Q9Y5J5 127 aa17.02■□□□□ 0.31
RCCD1-208ENST00000557266 TRBV7-9A0A0J9YWB2 115 aa17.01■□□□□ 0.31
RCCD1-208ENST00000557266 GNRH2O43555 120 aa17.01■□□□□ 0.31
RCCD1-208ENST00000557266 MYOZ3Q8TDC0 251 aa17.01■□□□□ 0.31
RCCD1-208ENST00000557266 RASL10AQ92737 203 aa17.01■□□□□ 0.31
RCCD1-208ENST00000557266 K7EP13 123 aa17■□□□□ 0.31
RCCD1-208ENST00000557266 MED14OSP0DP75 135 aa17■□□□□ 0.31
RCCD1-208ENST00000557266 C14orf178Q8N769 122 aaPredicted RBP17■□□□□ 0.31
RCCD1-208ENST00000557266 DPH3P1Q9H4G8 78 aa17■□□□□ 0.31
RCCD1-208ENST00000557266 RNASE3P12724 160 aaKnown RBP17■□□□□ 0.31
RCCD1-208ENST00000557266 TTTY13Q9BZ97 58 aa17■□□□□ 0.31
RCCD1-208ENST00000557266 MRPL35Q9NZE8 188 aaKnown RBP17■□□□□ 0.31
RCCD1-208ENST00000557266 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17■□□□□ 0.312e-8■■■□□ 14.7
RCCD1-208ENST00000557266 IGHV4-59P01825 116 aa16.99■□□□□ 0.31
RCCD1-208ENST00000557266 RNASE8Q8TDE3 154 aaKnown RBP16.99■□□□□ 0.31
RCCD1-208ENST00000557266 ZNF580Q9UK33 172 aa16.99■□□□□ 0.31
RCCD1-208ENST00000557266 CSMD2Q7Z408 3487 aa16.99■□□□□ 0.31
RCCD1-208ENST00000557266 A6NDN8 102 aa16.99■□□□□ 0.31
RCCD1-208ENST00000557266 K7EMT4 169 aa16.99■□□□□ 0.31
RCCD1-208ENST00000557266 GATA3P23771 443 aa16.99■□□□□ 0.31
RCCD1-208ENST00000557266 PSMB8P28062 276 aa16.99■□□□□ 0.31
RCCD1-208ENST00000557266 ZC2HC1BQ5TFG8 222 aa16.99■□□□□ 0.31
RCCD1-208ENST00000557266 GTSCR1Q86UQ5 136 aa16.99■□□□□ 0.31
RCCD1-208ENST00000557266 RPL39LQ96EH5 51 aaKnown RBP16.99■□□□□ 0.31
RCCD1-208ENST00000557266 J3QKU1 62 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms