RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 HYLS1Q96M11 299 aa12.26□□□□□ -0.45
VIPAS39-209ENST00000556909 TYMSP04818 313 aa12.25□□□□□ -0.45
VIPAS39-209ENST00000556909 GATA1P15976 413 aaPredicted RBP12.25□□□□□ -0.45
VIPAS39-209ENST00000556909 MZT2BQ6NZ67 158 aa12.25□□□□□ -0.45
VIPAS39-209ENST00000556909 Q8N814 137 aa12.25□□□□□ -0.45
VIPAS39-209ENST00000556909 ATP5SQ99766 215 aa12.25□□□□□ -0.45
VIPAS39-209ENST00000556909 OTORQ9NRC9 128 aa12.25□□□□□ -0.45
VIPAS39-209ENST00000556909 RPH3ALQ9UNE2 315 aa12.25□□□□□ -0.45
VIPAS39-209ENST00000556909 IBA57-AS1B1ANH7 110 aa12.24□□□□□ -0.45
VIPAS39-209ENST00000556909 F6UZH7 168 aa12.24□□□□□ -0.45
VIPAS39-209ENST00000556909 EIF3GO75821 320 aaKnown RBP eCLIP12.24□□□□□ -0.45
VIPAS39-209ENST00000556909 TAS2R45P59539 299 aa12.24□□□□□ -0.45
VIPAS39-209ENST00000556909 TRAV21A0A0B4J279 112 aa12.23□□□□□ -0.45
VIPAS39-209ENST00000556909 CMTM2Q8TAZ6 248 aa12.23□□□□□ -0.45
VIPAS39-209ENST00000556909 Q9HAA7 133 aa12.23□□□□□ -0.45
VIPAS39-209ENST00000556909 PGPA6NDG6 321 aa12.22□□□□□ -0.45
VIPAS39-209ENST00000556909 ASAH1Q13510 395 aa12.22□□□□□ -0.45
VIPAS39-209ENST00000556909 GOLT1AQ6ZVE7 132 aa12.22□□□□□ -0.45
VIPAS39-209ENST00000556909 TVP23CQ96ET8 276 aa12.22□□□□□ -0.45
VIPAS39-209ENST00000556909 SDF2L1Q9HCN8 221 aa12.22□□□□□ -0.45
VIPAS39-209ENST00000556909 TRAV8-1A0A0A6YYK1 113 aa12.21□□□□□ -0.45
VIPAS39-209ENST00000556909 TRAV8-6A0A0B4J262 113 aa12.21□□□□□ -0.45
VIPAS39-209ENST00000556909 FBLL1A6NHQ2 334 aaKnown RBP12.21□□□□□ -0.45
VIPAS39-209ENST00000556909 OR10J3Q5JRS4 329 aa12.21□□□□□ -0.45
VIPAS39-209ENST00000556909 SLC25A29Q8N8R3 303 aa12.21□□□□□ -0.45
VIPAS39-209ENST00000556909 TREM1Q9NP99 234 aa12.21□□□□□ -0.45
VIPAS39-209ENST00000556909 MBD2Q9UBB5 411 aa12.21□□□□□ -0.45
VIPAS39-209ENST00000556909 HSPB11Q9Y547 144 aa12.21□□□□□ -0.45
VIPAS39-209ENST00000556909 PFN1P07737 140 aaKnown RBP12.2□□□□□ -0.46
VIPAS39-209ENST00000556909 CYCSP99999 105 aaKnown RBP12.2□□□□□ -0.46
VIPAS39-209ENST00000556909 FAM74A1Q5RGS3 127 aa12.2□□□□□ -0.46
VIPAS39-209ENST00000556909 ENKURQ8TC29 256 aa12.2□□□□□ -0.46
VIPAS39-209ENST00000556909 PPP1R1CQ8WVI7 109 aa12.2□□□□□ -0.46
VIPAS39-209ENST00000556909 ASB13Q8WXK3 278 aa12.2□□□□□ -0.46
VIPAS39-209ENST00000556909 KCNS1Q96KK3 526 aa12.2□□□□□ -0.46
VIPAS39-209ENST00000556909 FAM30AQ9NZY2 134 aa12.2□□□□□ -0.46
VIPAS39-209ENST00000556909 IGHV3-30P01768 117 aa12.19□□□□□ -0.46
VIPAS39-209ENST00000556909 IGHV3-33P01772 117 aa12.19□□□□□ -0.46
VIPAS39-209ENST00000556909 IGHV3-30-3P0DP02 117 aa12.19□□□□□ -0.46
VIPAS39-209ENST00000556909 IGHV3-30-5P0DP03 117 aa12.19□□□□□ -0.46
VIPAS39-209ENST00000556909 H2BFSP57053 126 aa12.19□□□□□ -0.46
VIPAS39-209ENST00000556909 RHOHQ15669 191 aa12.19□□□□□ -0.46
VIPAS39-209ENST00000556909 ARL6IP6Q8N6S5 226 aa12.19□□□□□ -0.46
VIPAS39-209ENST00000556909 SCGB1C1Q8TD33 95 aa12.19□□□□□ -0.46
VIPAS39-209ENST00000556909 SMIM3Q9BZL3 60 aa12.19□□□□□ -0.46
VIPAS39-209ENST00000556909 BOLA1Q9Y3E2 137 aa12.19□□□□□ -0.46
VIPAS39-209ENST00000556909 TRBV6-4A0A1B0GX49 114 aa12.18□□□□□ -0.46
VIPAS39-209ENST00000556909 RS1O15537 224 aa12.18□□□□□ -0.46
VIPAS39-209ENST00000556909 GNG5P63218 68 aa12.18□□□□□ -0.46
VIPAS39-209ENST00000556909 ZNF876PQ49A33 203 aa12.18□□□□□ -0.46
VIPAS39-209ENST00000556909 LELP1Q5T871 98 aa12.18□□□□□ -0.46
VIPAS39-209ENST00000556909 CFAP126Q5VTH2 177 aa12.18□□□□□ -0.46
VIPAS39-209ENST00000556909 DPPA3Q6W0C5 159 aa12.18□□□□□ -0.46
VIPAS39-209ENST00000556909 PRADC1Q9BSG0 188 aa12.18□□□□□ -0.46
VIPAS39-209ENST00000556909 NDUFA13Q9P0J0 144 aa12.18□□□□□ -0.46
VIPAS39-209ENST00000556909 LAGE3Q14657 143 aa12.17□□□□□ -0.46
VIPAS39-209ENST00000556909 PQLC2Q6ZP29 291 aa12.17□□□□□ -0.46
VIPAS39-209ENST00000556909 IGHV3-73A0A0B4J1V6 119 aa12.16□□□□□ -0.46
VIPAS39-209ENST00000556909 MPC2O95563 127 aa12.16□□□□□ -0.46
VIPAS39-209ENST00000556909 C1QBP02746 253 aa12.16□□□□□ -0.46
VIPAS39-209ENST00000556909 WFDC2Q14508 124 aa12.16□□□□□ -0.46
VIPAS39-209ENST00000556909 C11orf21Q9P2W6 132 aa12.16□□□□□ -0.46
VIPAS39-209ENST00000556909 J3QL48 77 aa12.15□□□□□ -0.46
VIPAS39-209ENST00000556909 CIDEAO60543 219 aa12.15□□□□□ -0.46
VIPAS39-209ENST00000556909 PET100P0DJ07 73 aa12.15□□□□□ -0.46
VIPAS39-209ENST00000556909 RPL12P30050 165 aaKnown RBP12.15□□□□□ -0.46
VIPAS39-209ENST00000556909 ZNF80P51504 273 aaPredicted RBP12.15□□□□□ -0.46
VIPAS39-209ENST00000556909 RAB2AP61019 212 aa12.15□□□□□ -0.46
VIPAS39-209ENST00000556909 ACOT6Q3I5F7 207 aaPredicted RBP12.15□□□□□ -0.46
VIPAS39-209ENST00000556909 LINC00299Q6ZSB3 139 aa12.15□□□□□ -0.46
VIPAS39-209ENST00000556909 SGK494Q96LW2 274 aa12.15□□□□□ -0.46
VIPAS39-209ENST00000556909 C9orf85Q96MD7 179 aa12.15□□□□□ -0.46
VIPAS39-209ENST00000556909 GTSF1LQ9H1H1 148 aa12.15□□□□□ -0.46
VIPAS39-209ENST00000556909 WFDC1Q9HC57 220 aa12.15□□□□□ -0.46
VIPAS39-209ENST00000556909 A0A1W2PPV4 95 aa12.14□□□□□ -0.47
VIPAS39-209ENST00000556909 INMT-MINDY4F8WBC2 141 aa12.14□□□□□ -0.47
VIPAS39-209ENST00000556909 HMGB3O15347 200 aaKnown RBP12.14□□□□□ -0.47
VIPAS39-209ENST00000556909 Q6ZSA8 131 aa12.14□□□□□ -0.47
VIPAS39-209ENST00000556909 Q8N3U1 123 aa12.14□□□□□ -0.47
VIPAS39-209ENST00000556909 TMEM75Q8N9X5 138 aa12.14□□□□□ -0.47
VIPAS39-209ENST00000556909 ATP6V0E2Q8NHE4 81 aa12.14□□□□□ -0.47
VIPAS39-209ENST00000556909 NDFIP1Q9BT67 221 aa12.14□□□□□ -0.47
VIPAS39-209ENST00000556909 MGST1P10620 155 aaKnown RBP12.13□□□□□ -0.47
VIPAS39-209ENST00000556909 ZNF506Q5JVG8 444 aa12.13□□□□□ -0.47
VIPAS39-209ENST00000556909 S100ZQ8WXG8 99 aa12.13□□□□□ -0.47
VIPAS39-209ENST00000556909 TM2D2Q9BX73 214 aa12.13□□□□□ -0.47
VIPAS39-209ENST00000556909 SERTM2A0A1B0GWG4 89 aa12.12□□□□□ -0.47
VIPAS39-209ENST00000556909 PGPEP1LA6NFU8 196 aa12.12□□□□□ -0.47
VIPAS39-209ENST00000556909 UPK1BO75841 260 aa12.12□□□□□ -0.47
VIPAS39-209ENST00000556909 ARL14EPLP0DKL9 152 aa12.12□□□□□ -0.47
VIPAS39-209ENST00000556909 TAAR5O14804 337 aa12.11□□□□□ -0.47
VIPAS39-209ENST00000556909 GCGP01275 180 aa12.11□□□□□ -0.47
VIPAS39-209ENST00000556909 PLA2G1BP04054 148 aaKnown RBP12.11□□□□□ -0.47
VIPAS39-209ENST00000556909 TCRAP04437 139 aa12.11□□□□□ -0.47
VIPAS39-209ENST00000556909 LINC00528Q8N1L1 170 aa12.11□□□□□ -0.47
VIPAS39-209ENST00000556909 C5orf17Q8NAS9 161 aa12.11□□□□□ -0.47
VIPAS39-209ENST00000556909 OR10G9Q8NGN4 311 aa12.11□□□□□ -0.47
VIPAS39-209ENST00000556909 OR10G7Q8NGN6 311 aa12.11□□□□□ -0.47
VIPAS39-209ENST00000556909 PTH2Q96A98 100 aa12.11□□□□□ -0.47
VIPAS39-209ENST00000556909 LECT2O14960 151 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms