RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 LYZL2Q7Z4W2 148 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 BAP18Q8IXM2 172 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 MTURNQ8N3F0 131 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 OR8A1Q8NGG7 326 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 OR51S1Q8NGJ8 323 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 LHFPL5Q8TAF8 219 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 RXFP4Q8TDU9 374 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 TMEM263Q8WUH6 116 aaKnown RBP3.2□□□□□ -1.9
HIF1A-209ENST00000556827 RPUSD4Q96CM3 377 aaKnown RBP3.2□□□□□ -1.9
HIF1A-209ENST00000556827 PGLYRP4Q96LB8 373 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 C20orf144Q9BQM9 153 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 SLC25A39Q9BZJ4 359 aaPredicted RBP3.2□□□□□ -1.9
HIF1A-209ENST00000556827 NOP10Q9NPE3 64 aaKnown RBP3.2□□□□□ -1.9
HIF1A-209ENST00000556827 HIGD1AQ9Y241 93 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 STARD9Q9P2P6 4700 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 IGKV1D-37A0A075B6S9 117 aa3.19□□□□□ -1.9
HIF1A-209ENST00000556827 DUXBA0A1W2PPF3 345 aa3.19□□□□□ -1.9
HIF1A-209ENST00000556827 A8MTW9 85 aa3.19□□□□□ -1.9
HIF1A-209ENST00000556827 SYNGR2O43760 224 aa3.19□□□□□ -1.9
HIF1A-209ENST00000556827 PRM2P04554 102 aa3.19□□□□□ -1.9
HIF1A-209ENST00000556827 IAPPP10997 89 aa3.19□□□□□ -1.9
HIF1A-209ENST00000556827 AP3S2P59780 193 aa3.19□□□□□ -1.9
HIF1A-209ENST00000556827 SELENOTP62341 195 aa3.19□□□□□ -1.9
HIF1A-209ENST00000556827 PSG3Q16557 428 aa3.19□□□□□ -1.9
HIF1A-209ENST00000556827 SPANXN5Q5MJ07 72 aa3.19□□□□□ -1.9
HIF1A-209ENST00000556827 AMTNQ6UX39 209 aa3.19□□□□□ -1.9
HIF1A-209ENST00000556827 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.19□□□□□ -1.9
HIF1A-209ENST00000556827 TMED4Q7Z7H5 227 aa3.19□□□□□ -1.9
HIF1A-209ENST00000556827 RNF182Q8N6D2 247 aa3.19□□□□□ -1.9
HIF1A-209ENST00000556827 SMIM4Q8WVI0 70 aa3.19□□□□□ -1.9
HIF1A-209ENST00000556827 FAM104AQ969W3 186 aa3.19□□□□□ -1.9
HIF1A-209ENST00000556827 DIRAS2Q96HU8 199 aa3.19□□□□□ -1.9
HIF1A-209ENST00000556827 SDHCQ99643 169 aaPredicted RBP3.19□□□□□ -1.9
HIF1A-209ENST00000556827 ZNF586Q9NXT0 402 aa3.19□□□□□ -1.9
HIF1A-209ENST00000556827 RSL24D1Q9UHA3 163 aaKnown RBP3.19□□□□□ -1.9
HIF1A-209ENST00000556827 MRPS16Q9Y3D3 137 aaKnown RBP3.19□□□□□ -1.9
HIF1A-209ENST00000556827 ALMS1Q8TCU4 4167 aa3.19□□□□□ -1.9
HIF1A-209ENST00000556827 ZNF701M0R085 212 aaPredicted RBP3.18□□□□□ -1.9
HIF1A-209ENST00000556827 GOSR2O14653 212 aa3.18□□□□□ -1.9
HIF1A-209ENST00000556827 SIVA1O15304 175 aa3.18□□□□□ -1.9
HIF1A-209ENST00000556827 CRXO43186 299 aaPredicted RBP3.18□□□□□ -1.9
HIF1A-209ENST00000556827 LINC00869P0C866 280 aa3.18□□□□□ -1.9
HIF1A-209ENST00000556827 SLC25A6P12236 298 aa3.18□□□□□ -1.9
HIF1A-209ENST00000556827 CXCL2P19875 107 aa3.18□□□□□ -1.9
HIF1A-209ENST00000556827 CXCL3P19876 107 aa3.18□□□□□ -1.9
HIF1A-209ENST00000556827 CTRLP40313 264 aa3.18□□□□□ -1.9
HIF1A-209ENST00000556827 LEPP41159 167 aa3.18□□□□□ -1.9
HIF1A-209ENST00000556827 SLAQ13239 276 aa3.18□□□□□ -1.9
HIF1A-209ENST00000556827 RAB31Q13636 194 aa3.18□□□□□ -1.9
HIF1A-209ENST00000556827 ESRGQ1W209 222 aa3.18□□□□□ -1.9
HIF1A-209ENST00000556827 TMEM128Q5BJH2 165 aa3.18□□□□□ -1.9
HIF1A-209ENST00000556827 LCN15Q6UWW0 184 aa3.18□□□□□ -1.9
HIF1A-209ENST00000556827 CYP2G1PQ6ZSU1 146 aa3.18□□□□□ -1.9
HIF1A-209ENST00000556827 BPIFA4PQ86YQ2 179 aa3.18□□□□□ -1.9
HIF1A-209ENST00000556827 ZNF680Q8NEM1 530 aa3.18□□□□□ -1.9
HIF1A-209ENST00000556827 SLC50A1Q9BRV3 221 aa3.18□□□□□ -1.9
HIF1A-209ENST00000556827 UPK3BQ9BT76 320 aa3.18□□□□□ -1.9
HIF1A-209ENST00000556827 SHANK2-AS3Q9BTD1 123 aa3.18□□□□□ -1.9
HIF1A-209ENST00000556827 ZNF331Q9NQX6 463 aaPredicted RBP3.18□□□□□ -1.9
HIF1A-209ENST00000556827 IGKV1OR2-108A0A075B7D4 117 aa3.17□□□□□ -1.9
HIF1A-209ENST00000556827 PLAC8L1A1L4L8 177 aa3.17□□□□□ -1.9
HIF1A-209ENST00000556827 H3BRN7 92 aa3.17□□□□□ -1.9
HIF1A-209ENST00000556827 K7EP13 123 aa3.17□□□□□ -1.9
HIF1A-209ENST00000556827 COX7A2P2O60397 106 aa3.17□□□□□ -1.9
HIF1A-209ENST00000556827 NOL3O60936 208 aaKnown RBP3.17□□□□□ -1.9
HIF1A-209ENST00000556827 LINC00315P59091 139 aa3.17□□□□□ -1.9
HIF1A-209ENST00000556827 GUK1Q16774 197 aa3.17□□□□□ -1.9
HIF1A-209ENST00000556827 Q5VSD8 79 aa3.17□□□□□ -1.9
HIF1A-209ENST00000556827 ACOT7LQ6ZUV0 252 aa3.17□□□□□ -1.9
HIF1A-209ENST00000556827 ZNF546Q86UE3 836 aa3.17□□□□□ -1.9
HIF1A-209ENST00000556827 LYPD1Q8N2G4 141 aa3.17□□□□□ -1.9
HIF1A-209ENST00000556827 OR10P1Q8NGE3 313 aa3.17□□□□□ -1.9
HIF1A-209ENST00000556827 ARL6Q9H0F7 186 aa3.17□□□□□ -1.9
HIF1A-209ENST00000556827 NPVFQ9HCQ7 196 aa3.17□□□□□ -1.9
HIF1A-209ENST00000556827 PSENENQ9NZ42 101 aa3.17□□□□□ -1.9
HIF1A-209ENST00000556827 PXMP4Q9Y6I8 212 aa3.17□□□□□ -1.9
HIF1A-209ENST00000556827 ICOSQ9Y6W8 199 aa3.17□□□□□ -1.9
HIF1A-209ENST00000556827 HYDINQ4G0P3 5121 aa3.17□□□□□ -1.9
HIF1A-209ENST00000556827 PCLOQ9Y6V0 5065 aa3.16□□□□□ -1.9
HIF1A-209ENST00000556827 TRGV1A0A0A0MS02 117 aa3.16□□□□□ -1.9
HIF1A-209ENST00000556827 TRAV8-2A0A0B4J237 113 aa3.16□□□□□ -1.9
HIF1A-209ENST00000556827 TRAV12-3A0A0B4J271 114 aa3.16□□□□□ -1.9
HIF1A-209ENST00000556827 ANKRD20A5PA0PJZ0 165 aa3.16□□□□□ -1.9
HIF1A-209ENST00000556827 FABP12A6NFH5 140 aa3.16□□□□□ -1.9
HIF1A-209ENST00000556827 H3BP45 60 aa3.16□□□□□ -1.9
HIF1A-209ENST00000556827 PSCAO43653 123 aa3.16□□□□□ -1.9
HIF1A-209ENST00000556827 PITX3O75364 302 aa3.16□□□□□ -1.9
HIF1A-209ENST00000556827 EVI2AP22794 236 aa3.16□□□□□ -1.9
HIF1A-209ENST00000556827 INPP1P49441 399 aa3.16□□□□□ -1.9
HIF1A-209ENST00000556827 PLP1P60201 277 aa3.16□□□□□ -1.9
HIF1A-209ENST00000556827 POLR2GP62487 172 aaKnown RBP eCLIP3.16□□□□□ -1.9
HIF1A-209ENST00000556827 MRPL23Q16540 153 aaKnown RBP3.16□□□□□ -1.9
HIF1A-209ENST00000556827 PYDC2Q56P42 97 aa3.16□□□□□ -1.9
HIF1A-209ENST00000556827 KCNIP4Q6PIL6 250 aa3.16□□□□□ -1.9
HIF1A-209ENST00000556827 LINC00305Q7Z4B0 112 aa3.16□□□□□ -1.9
HIF1A-209ENST00000556827 TOMM5Q8N4H5 51 aa3.16□□□□□ -1.9
HIF1A-209ENST00000556827 C12orf45Q8N5I9 185 aaPredicted RBP3.16□□□□□ -1.9
HIF1A-209ENST00000556827 MCFD2Q8NI22 146 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms