RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 IGLL1P15814 213 aa7.61□□□□□ -1.19
TMEM260-211ENST00000556648 UFC1Q9Y3C8 167 aa7.61□□□□□ -1.19
TMEM260-211ENST00000556648 CENPEQ02224 2701 aa7.61□□□□□ -1.19
TMEM260-211ENST00000556648 TRAV26-2A0A0B4J265 109 aa7.61□□□□□ -1.19
TMEM260-211ENST00000556648 TMEM89A2RUT3 159 aa7.61□□□□□ -1.19
TMEM260-211ENST00000556648 SNAI2O43623 268 aa7.61□□□□□ -1.19
TMEM260-211ENST00000556648 DEFB136Q30KP8 78 aa7.61□□□□□ -1.19
TMEM260-211ENST00000556648 ANXA2RQ3ZCQ2 193 aa7.61□□□□□ -1.19
TMEM260-211ENST00000556648 ZNF747Q9BV97 191 aa7.61□□□□□ -1.19
TMEM260-211ENST00000556648 MS4A6AQ9H2W1 248 aa7.61□□□□□ -1.19
TMEM260-211ENST00000556648 LENEPQ9Y5L5 61 aa7.61□□□□□ -1.19
TMEM260-211ENST00000556648 M0R143 59 aa7.6□□□□□ -1.19
TMEM260-211ENST00000556648 ZNF688P0C7X2 276 aa7.6□□□□□ -1.19
TMEM260-211ENST00000556648 MAP1LC3CQ9BXW4 147 aa7.6□□□□□ -1.19
TMEM260-211ENST00000556648 HSPB8Q9UJY1 196 aa7.6□□□□□ -1.19
TMEM260-211ENST00000556648 NBPF19A0A087WUL8 3843 aa7.6□□□□□ -1.19
TMEM260-211ENST00000556648 TRAV21A0A0B4J279 112 aa7.59□□□□□ -1.19
TMEM260-211ENST00000556648 GNRH2O43555 120 aa7.59□□□□□ -1.19
TMEM260-211ENST00000556648 TNFRSF6BO95407 300 aa7.59□□□□□ -1.19
TMEM260-211ENST00000556648 HOXD3P31249 432 aaPredicted RBP7.59□□□□□ -1.19
TMEM260-211ENST00000556648 SPANXN1Q5VSR9 72 aa7.59□□□□□ -1.19
TMEM260-211ENST00000556648 ELANEP08246 267 aa7.59□□□□□ -1.19
TMEM260-211ENST00000556648 SLURP1P55000 103 aa7.59□□□□□ -1.19
TMEM260-211ENST00000556648 PSMG4Q5JS54 123 aa7.59□□□□□ -1.19
TMEM260-211ENST00000556648 Q6ZN92 141 aa7.59□□□□□ -1.19
TMEM260-211ENST00000556648 APRG1Q8IVJ8 170 aa7.59□□□□□ -1.19
TMEM260-211ENST00000556648 DUX3Q96PT4 197 aa7.59□□□□□ -1.19
TMEM260-211ENST00000556648 UQCR10Q9UDW1 63 aa7.59□□□□□ -1.19
TMEM260-211ENST00000556648 DOPEY2Q9Y3R5 2298 aa7.59□□□□□ -1.19
TMEM260-211ENST00000556648 ZNF469Q96JG9 3925 aaPredicted RBP7.58□□□□□ -1.2
TMEM260-211ENST00000556648 NAV2Q8IVL1 2488 aa7.58□□□□□ -1.2
TMEM260-211ENST00000556648 IGHV4-4A0A075B6R2 117 aa7.58□□□□□ -1.2
TMEM260-211ENST00000556648 TCF21O43680 179 aa7.58□□□□□ -1.2
TMEM260-211ENST00000556648 BATFQ16520 125 aa7.58□□□□□ -1.2
TMEM260-211ENST00000556648 LINC01545Q5VT33 79 aa7.58□□□□□ -1.2
TMEM260-211ENST00000556648 PET117Q6UWS5 81 aa7.58□□□□□ -1.2
TMEM260-211ENST00000556648 ADAMTSL5Q6ZMM2 481 aa7.58□□□□□ -1.2
TMEM260-211ENST00000556648 LURAP1LQ8IV03 231 aa7.58□□□□□ -1.2
TMEM260-211ENST00000556648 NRACQ8N912 160 aa7.58□□□□□ -1.2
TMEM260-211ENST00000556648 MAP1LC3AQ9H492 121 aa7.58□□□□□ -1.2
TMEM260-211ENST00000556648 APCP25054 2843 aa7.58□□□□□ -1.2
TMEM260-211ENST00000556648 C20orf202A1L168 122 aa7.57□□□□□ -1.2
TMEM260-211ENST00000556648 M0R381 172 aa7.57□□□□□ -1.2
TMEM260-211ENST00000556648 IGKV3-20P01619 116 aa7.57□□□□□ -1.2
TMEM260-211ENST00000556648 Q8N2B8 174 aa7.57□□□□□ -1.2
TMEM260-211ENST00000556648 OR2K2Q8NGT1 345 aa7.57□□□□□ -1.2
TMEM260-211ENST00000556648 UBE2E2Q96LR5 201 aa7.57□□□□□ -1.2
TMEM260-211ENST00000556648 KLLNB2CW77 178 aa7.57□□□□□ -1.2
TMEM260-211ENST00000556648 K7EQG2 157 aa7.57□□□□□ -1.2
TMEM260-211ENST00000556648 HBDP02042 147 aa7.57□□□□□ -1.2
TMEM260-211ENST00000556648 PPBPP02775 128 aa7.57□□□□□ -1.2
TMEM260-211ENST00000556648 RNASE3P12724 160 aaKnown RBP7.57□□□□□ -1.2
TMEM260-211ENST00000556648 PLA2G2AP14555 144 aa7.57□□□□□ -1.2
TMEM260-211ENST00000556648 ID1P41134 155 aa7.57□□□□□ -1.2
TMEM260-211ENST00000556648 ASIPP42127 132 aa7.57□□□□□ -1.2
TMEM260-211ENST00000556648 HNRNPA3P51991 378 aaKnown RBP7.57□□□□□ -1.2
TMEM260-211ENST00000556648 CACNG7P62955 275 aa7.57□□□□□ -1.2
TMEM260-211ENST00000556648 TCTEX1D4Q5JR98 221 aa7.57□□□□□ -1.2
TMEM260-211ENST00000556648 RNF152Q8N8N0 203 aa7.57□□□□□ -1.2
TMEM260-211ENST00000556648 TENM4Q6N022 2769 aa7.56□□□□□ -1.2
TMEM260-211ENST00000556648 IGLV2-18A0A075B6J9 118 aa7.56□□□□□ -1.2
TMEM260-211ENST00000556648 LGALS9O00182 355 aa7.56□□□□□ -1.2
TMEM260-211ENST00000556648 S100A4P26447 101 aaKnown RBP7.56□□□□□ -1.2
TMEM260-211ENST00000556648 LBHQ53QV2 105 aaPredicted RBP7.56□□□□□ -1.2
TMEM260-211ENST00000556648 KLHDC1Q8N7A1 406 aa7.56□□□□□ -1.2
TMEM260-211ENST00000556648 MXRA5Q9NR99 2828 aa7.56□□□□□ -1.2
TMEM260-211ENST00000556648 TRAV12-2A0A075B6T6 113 aa7.56□□□□□ -1.2
TMEM260-211ENST00000556648 LINC01546A6NGU7 62 aa7.56□□□□□ -1.2
TMEM260-211ENST00000556648 TSPOP30536 169 aa7.56□□□□□ -1.2
TMEM260-211ENST00000556648 NUTF2P61970 127 aaKnown RBP7.56□□□□□ -1.2
TMEM260-211ENST00000556648 C18orf15Q96N68 181 aa7.56□□□□□ -1.2
TMEM260-211ENST00000556648 SCRT2Q9NQ03 307 aa7.56□□□□□ -1.2
TMEM260-211ENST00000556648 TEX15Q9BXT5 2789 aa7.55□□□□□ -1.2
TMEM260-211ENST00000556648 TRAV12-3A0A0B4J271 114 aa7.55□□□□□ -1.2
TMEM260-211ENST00000556648 A0A0J9YX75 114 aa7.55□□□□□ -1.2
TMEM260-211ENST00000556648 LEPP41159 167 aa7.55□□□□□ -1.2
TMEM260-211ENST00000556648 SMIM15Q7Z3B0 74 aa7.55□□□□□ -1.2
TMEM260-211ENST00000556648 LAMTOR2Q9Y2Q5 125 aa7.55□□□□□ -1.2
TMEM260-211ENST00000556648 TRBV7-9A0A0J9YWB2 115 aa7.54□□□□□ -1.2
TMEM260-211ENST00000556648 DNAJC9-AS1A6NH13 148 aa7.54□□□□□ -1.2
TMEM260-211ENST00000556648 TCAPO15273 167 aa7.54□□□□□ -1.2
TMEM260-211ENST00000556648 TCTAP57738 103 aa7.54□□□□□ -1.2
TMEM260-211ENST00000556648 KRTAP1-1Q07627 177 aa7.54□□□□□ -1.2
TMEM260-211ENST00000556648 KHDC1LQ5JSQ8 128 aa7.54□□□□□ -1.2
TMEM260-211ENST00000556648 C14orf178Q8N769 122 aaPredicted RBP7.54□□□□□ -1.2
TMEM260-211ENST00000556648 IFI27L1Q96BM0 104 aa7.54□□□□□ -1.2
TMEM260-211ENST00000556648 ST20Q9HBF5 79 aa7.54□□□□□ -1.2
TMEM260-211ENST00000556648 ESM1Q9NQ30 184 aa7.54□□□□□ -1.2
TMEM260-211ENST00000556648 PHLDA3Q9Y5J5 127 aa7.54□□□□□ -1.2
TMEM260-211ENST00000556648 MUC4Q99102 2169 aa7.54□□□□□ -1.2
TMEM260-211ENST00000556648 MGPP08493 103 aa7.54□□□□□ -1.2
TMEM260-211ENST00000556648 Q6ZSV7 163 aa7.54□□□□□ -1.2
TMEM260-211ENST00000556648 MRPL52Q86TS9 123 aaKnown RBP7.54□□□□□ -1.2
TMEM260-211ENST00000556648 Q8N8P6 123 aa7.54□□□□□ -1.2
TMEM260-211ENST00000556648 TMEM158Q8WZ71 300 aa7.54□□□□□ -1.2
TMEM260-211ENST00000556648 RPL39LQ96EH5 51 aaKnown RBP7.54□□□□□ -1.2
TMEM260-211ENST00000556648 JPT2Q9H910 190 aa7.54□□□□□ -1.2
TMEM260-211ENST00000556648 NXT2Q9NPJ8 142 aaKnown RBP7.54□□□□□ -1.2
TMEM260-211ENST00000556648 AGRNO00468 2067 aa7.54□□□□□ -1.2
TMEM260-211ENST00000556648 C7orf71A4D174 169 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms