RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 PAGE4O60829 102 aa7.47□□□□□ -1.21
GABRB3-211ENST00000556636 GCGP01275 180 aa7.47□□□□□ -1.21
GABRB3-211ENST00000556636 TYMSP04818 313 aa7.47□□□□□ -1.21
GABRB3-211ENST00000556636 CRIP1P50238 77 aa7.47□□□□□ -1.21
GABRB3-211ENST00000556636 CCL20P78556 96 aa7.47□□□□□ -1.21
GABRB3-211ENST00000556636 ZNF415Q09FC8 603 aa7.47□□□□□ -1.21
GABRB3-211ENST00000556636 SAPCD1Q5SSQ6 148 aa7.47□□□□□ -1.21
GABRB3-211ENST00000556636 COX8CQ7Z4L0 72 aa7.47□□□□□ -1.21
GABRB3-211ENST00000556636 RASL10AQ92737 203 aa7.47□□□□□ -1.21
GABRB3-211ENST00000556636 VSIG2Q96IQ7 327 aa7.47□□□□□ -1.21
GABRB3-211ENST00000556636 MRPL16Q9NX20 251 aaKnown RBP7.47□□□□□ -1.21
GABRB3-211ENST00000556636 NAGKQ9UJ70 344 aa7.47□□□□□ -1.21
GABRB3-211ENST00000556636 ARL2-SNX15V9GYD0 113 aa7.47□□□□□ -1.21
GABRB3-211ENST00000556636 TRGV11A0A075B6L2 103 aa7.46□□□□□ -1.22
GABRB3-211ENST00000556636 TRGV2A0A075B6R0 118 aa7.46□□□□□ -1.22
GABRB3-211ENST00000556636 PFN1P07737 140 aaKnown RBP7.46□□□□□ -1.22
GABRB3-211ENST00000556636 H2AFB1P0C5Y9 115 aa7.46□□□□□ -1.22
GABRB3-211ENST00000556636 RNF212Q495C1 297 aa7.46□□□□□ -1.22
GABRB3-211ENST00000556636 SMUG1Q53HV7 270 aa7.46□□□□□ -1.22
GABRB3-211ENST00000556636 CST9LP1Q5W188 147 aa7.46□□□□□ -1.22
GABRB3-211ENST00000556636 AKAP14Q86UN6 197 aa7.46□□□□□ -1.22
GABRB3-211ENST00000556636 ZNF575Q86XF7 245 aa7.46□□□□□ -1.22
GABRB3-211ENST00000556636 C9orf62Q8N4C0 152 aa7.46□□□□□ -1.22
GABRB3-211ENST00000556636 SPXQ9BT56 116 aa7.46□□□□□ -1.22
GABRB3-211ENST00000556636 NDFIP1Q9BT67 221 aa7.46□□□□□ -1.22
GABRB3-211ENST00000556636 FRAS1Q86XX4 4008 aa7.46□□□□□ -1.22
GABRB3-211ENST00000556636 MUC4Q99102 2169 aa7.46□□□□□ -1.22
GABRB3-211ENST00000556636 TRAV1-1A0A0B4J248 108 aa7.45□□□□□ -1.22
GABRB3-211ENST00000556636 IGKV3D-20A0A0C4DH25 116 aa7.45□□□□□ -1.22
GABRB3-211ENST00000556636 A0A0J9YY99 117 aa7.45□□□□□ -1.22
GABRB3-211ENST00000556636 TRBV6-1A0A0K0K1D8 114 aa7.45□□□□□ -1.22
GABRB3-211ENST00000556636 A0A1B0GV50 99 aa7.45□□□□□ -1.22
GABRB3-211ENST00000556636 H3BNG1 76 aa7.45□□□□□ -1.22
GABRB3-211ENST00000556636 NUDT3O95989 172 aa7.45□□□□□ -1.22
GABRB3-211ENST00000556636 SULT1A2P50226 295 aa7.45□□□□□ -1.22
GABRB3-211ENST00000556636 FHL2Q14192 279 aa7.45□□□□□ -1.22
GABRB3-211ENST00000556636 SLC51BQ86UW2 128 aa7.45□□□□□ -1.22
GABRB3-211ENST00000556636 KCNS1Q96KK3 526 aa7.45□□□□□ -1.22
GABRB3-211ENST00000556636 BIRC6Q9NR09 4857 aa7.45□□□□□ -1.22
GABRB3-211ENST00000556636 DNAH17Q9UFH2 4485 aa7.44□□□□□ -1.22
GABRB3-211ENST00000556636 IGHV3-53P01767 116 aa7.44□□□□□ -1.22
GABRB3-211ENST00000556636 RNASE3P12724 160 aaKnown RBP7.44□□□□□ -1.22
GABRB3-211ENST00000556636 PPT1P50897 306 aa7.44□□□□□ -1.22
GABRB3-211ENST00000556636 RAB5CP51148 216 aa7.44□□□□□ -1.22
GABRB3-211ENST00000556636 Q86TA4 180 aa7.44□□□□□ -1.22
GABRB3-211ENST00000556636 ZC2HC1AQ96GY0 325 aa7.44□□□□□ -1.22
GABRB3-211ENST00000556636 TCEAL7Q9BRU2 100 aa7.44□□□□□ -1.22
GABRB3-211ENST00000556636 SDF2L1Q9HCN8 221 aa7.44□□□□□ -1.22
GABRB3-211ENST00000556636 ZFP30Q9Y2G7 519 aa7.44□□□□□ -1.22
GABRB3-211ENST00000556636 LINC00588Q9Y4M8 146 aa7.44□□□□□ -1.22
GABRB3-211ENST00000556636 FAT2Q9NYQ8 4349 aa7.44□□□□□ -1.22
GABRB3-211ENST00000556636 A0A096LPF7 62 aa7.43□□□□□ -1.22
GABRB3-211ENST00000556636 FABP5P3A8MUU1 101 aa7.43□□□□□ -1.22
GABRB3-211ENST00000556636 M0R2P5 195 aa7.43□□□□□ -1.22
GABRB3-211ENST00000556636 LTAP01374 205 aa7.43□□□□□ -1.22
GABRB3-211ENST00000556636 SFTA3P0C7M3 94 aa7.43□□□□□ -1.22
GABRB3-211ENST00000556636 ESRGQ1W209 222 aa7.43□□□□□ -1.22
GABRB3-211ENST00000556636 EIF5AL1Q6IS14 154 aaKnown RBP7.43□□□□□ -1.22
GABRB3-211ENST00000556636 Q6ZR54 194 aa7.43□□□□□ -1.22
GABRB3-211ENST00000556636 FMC1Q96HJ9 113 aa7.43□□□□□ -1.22
GABRB3-211ENST00000556636 ZNF479Q96JC4 524 aa7.43□□□□□ -1.22
GABRB3-211ENST00000556636 C9orf85Q96MD7 179 aa7.43□□□□□ -1.22
GABRB3-211ENST00000556636 SCO2A0A1W2PP80 73 aa7.42□□□□□ -1.22
GABRB3-211ENST00000556636 M0R2N4 97 aa7.42□□□□□ -1.22
GABRB3-211ENST00000556636 CRYBA4P53673 196 aa7.42□□□□□ -1.22
GABRB3-211ENST00000556636 FAM3BP58499 235 aaPredicted RBP7.42□□□□□ -1.22
GABRB3-211ENST00000556636 ZNF674Q2M3X9 581 aa7.42□□□□□ -1.22
GABRB3-211ENST00000556636 UBE2DNLQ8IWF7 75 aa7.42□□□□□ -1.22
GABRB3-211ENST00000556636 ZNRF2Q8NHG8 242 aa7.42□□□□□ -1.22
GABRB3-211ENST00000556636 MLST8Q9BVC4 326 aa7.42□□□□□ -1.22
GABRB3-211ENST00000556636 PRO0255Q9UI72 69 aa7.42□□□□□ -1.22
GABRB3-211ENST00000556636 HHLA3Q9XRX5 114 aa7.42□□□□□ -1.22
GABRB3-211ENST00000556636 NACAE9PAV3 2078 aa7.41□□□□□ -1.22
GABRB3-211ENST00000556636 IGLV2-18A0A075B6J9 118 aa7.41□□□□□ -1.22
GABRB3-211ENST00000556636 PGPEP1LA6NFU8 196 aa7.41□□□□□ -1.22
GABRB3-211ENST00000556636 SH2D1AO60880 128 aa7.41□□□□□ -1.22
GABRB3-211ENST00000556636 AKR1C3P42330 323 aa7.41□□□□□ -1.22
GABRB3-211ENST00000556636 CCL18P55774 89 aa7.41□□□□□ -1.22
GABRB3-211ENST00000556636 UBE2G1P62253 170 aa7.41□□□□□ -1.22
GABRB3-211ENST00000556636 SLAQ13239 276 aa7.41□□□□□ -1.22
GABRB3-211ENST00000556636 ZFP69Q49AA0 526 aa7.41□□□□□ -1.22
GABRB3-211ENST00000556636 PTH2Q96A98 100 aa7.41□□□□□ -1.22
GABRB3-211ENST00000556636 TRAV4A0A0B4J268 109 aa7.4□□□□□ -1.22
GABRB3-211ENST00000556636 KRBOX1C9JBD0 128 aa7.4□□□□□ -1.22
GABRB3-211ENST00000556636 PAX4O43316 350 aa7.4□□□□□ -1.22
GABRB3-211ENST00000556636 S100A9P06702 114 aaKnown RBP7.4□□□□□ -1.22
GABRB3-211ENST00000556636 ZNF876PQ49A33 203 aa7.4□□□□□ -1.22
GABRB3-211ENST00000556636 DNLZQ5SXM8 178 aa7.4□□□□□ -1.22
GABRB3-211ENST00000556636 C11orf52Q96A22 123 aa7.4□□□□□ -1.22
GABRB3-211ENST00000556636 GNG13Q9P2W3 67 aa7.4□□□□□ -1.22
GABRB3-211ENST00000556636 BOLA1Q9Y3E2 137 aa7.4□□□□□ -1.22
GABRB3-211ENST00000556636 C9JCJ5 164 aa7.39□□□□□ -1.23
GABRB3-211ENST00000556636 RTL8CO15255 209 aa7.39□□□□□ -1.23
GABRB3-211ENST00000556636 RS1O15537 224 aa7.39□□□□□ -1.23
GABRB3-211ENST00000556636 ORM1P02763 201 aa7.39□□□□□ -1.23
GABRB3-211ENST00000556636 NKX2-5P52952 324 aaPredicted RBP7.39□□□□□ -1.23
GABRB3-211ENST00000556636 FAM162BQ5T6X4 162 aa7.39□□□□□ -1.23
GABRB3-211ENST00000556636 CFAP126Q5VTH2 177 aa7.39□□□□□ -1.23
GABRB3-211ENST00000556636 BAGE2Q86Y30 109 aa7.39□□□□□ -1.23
GABRB3-211ENST00000556636 NHLRC2Q8NBF2 726 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms