RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 TRBV7-9A0A0J9YWB2 115 aa9.12□□□□□ -0.95
ACTN1-219ENST00000556432 C5orf51A6NDU8 294 aa9.12□□□□□ -0.95
ACTN1-219ENST00000556432 MBPP02686 304 aaPredicted RBP9.12□□□□□ -0.95
ACTN1-219ENST00000556432 CSN1S1P47710 185 aa9.12□□□□□ -0.95
ACTN1-219ENST00000556432 WDR83OSQ9Y284 106 aa9.12□□□□□ -0.95
ACTN1-219ENST00000556432 COX11Q9Y6N1 276 aa9.12□□□□□ -0.95
ACTN1-219ENST00000556432 RNF213Q63HN8 5207 aa9.12□□□□□ -0.95
ACTN1-219ENST00000556432 IGHV3-73A0A0B4J1V6 119 aa9.11□□□□□ -0.95
ACTN1-219ENST00000556432 FAM240BA0A1B0GVZ2 78 aa9.11□□□□□ -0.95
ACTN1-219ENST00000556432 GGTLC3B5MD39 225 aa9.11□□□□□ -0.95
ACTN1-219ENST00000556432 GNRH2O43555 120 aa9.11□□□□□ -0.95
ACTN1-219ENST00000556432 NBEAP1P0C6P0 100 aa9.11□□□□□ -0.95
ACTN1-219ENST00000556432 HNRNPA3P51991 378 aaKnown RBP9.11□□□□□ -0.95
ACTN1-219ENST00000556432 VWC2Q2TAL6 325 aa9.11□□□□□ -0.95
ACTN1-219ENST00000556432 Q6AWC8 147 aa9.11□□□□□ -0.95
ACTN1-219ENST00000556432 DAZ4Q86SG3 579 aaKnown RBP9.11□□□□□ -0.95
ACTN1-219ENST00000556432 RMI2Q96E14 147 aa9.11□□□□□ -0.95
ACTN1-219ENST00000556432 ATP5SQ99766 215 aa9.11□□□□□ -0.95
ACTN1-219ENST00000556432 SLC25A2Q9BXI2 301 aa9.11□□□□□ -0.95
ACTN1-219ENST00000556432 DAZ3Q9NR90 486 aaKnown RBP9.11□□□□□ -0.95
ACTN1-219ENST00000556432 LSM5Q9Y4Y9 91 aaKnown RBP9.11□□□□□ -0.95
ACTN1-219ENST00000556432 IGKV2D-24A0A075B6R9 120 aa9.1□□□□□ -0.95
ACTN1-219ENST00000556432 CCSO14618 274 aa9.1□□□□□ -0.95
ACTN1-219ENST00000556432 IGLV2-11P01706 119 aa9.1□□□□□ -0.95
ACTN1-219ENST00000556432 H2AFB2P0C5Z0 115 aa9.1□□□□□ -0.95
ACTN1-219ENST00000556432 OR10J4P0C629 311 aa9.1□□□□□ -0.95
ACTN1-219ENST00000556432 FGF7P21781 194 aa9.1□□□□□ -0.95
ACTN1-219ENST00000556432 GCSAMLQ5JQS6 135 aa9.1□□□□□ -0.95
ACTN1-219ENST00000556432 MZT2BQ6NZ67 158 aa9.1□□□□□ -0.95
ACTN1-219ENST00000556432 ENKURQ8TC29 256 aa9.1□□□□□ -0.95
ACTN1-219ENST00000556432 DAZAP1Q96EP5 407 aaKnown RBP9.1□□□□□ -0.95
ACTN1-219ENST00000556432 PHYHIPLQ96FC7 376 aa9.09□□□□□ -0.95
ACTN1-219ENST00000556432 TRAV8-1A0A0A6YYK1 113 aa9.08□□□□□ -0.96
ACTN1-219ENST00000556432 TRBV6-4A0A1B0GX49 114 aa9.08□□□□□ -0.96
ACTN1-219ENST00000556432 RBAKDNA6NC62 111 aa9.08□□□□□ -0.96
ACTN1-219ENST00000556432 FAM24AA6NFZ4 105 aa9.08□□□□□ -0.96
ACTN1-219ENST00000556432 FAM25EA8MYX2 175 aa9.08□□□□□ -0.96
ACTN1-219ENST00000556432 MT1HL1P0DM35 61 aa9.08□□□□□ -0.96
ACTN1-219ENST00000556432 ASIPP42127 132 aa9.08□□□□□ -0.96
ACTN1-219ENST00000556432 ZNF876PQ49A33 203 aa9.08□□□□□ -0.96
ACTN1-219ENST00000556432 MIR17HGQ75NE6 70 aa9.08□□□□□ -0.96
ACTN1-219ENST00000556432 MITD1Q8WV92 249 aa9.08□□□□□ -0.96
ACTN1-219ENST00000556432 PAXXQ9BUH6 204 aa9.08□□□□□ -0.96
ACTN1-219ENST00000556432 SH3BGRL3Q9H299 93 aa9.08□□□□□ -0.96
ACTN1-219ENST00000556432 OR51M1Q9H341 326 aa9.08□□□□□ -0.96
ACTN1-219ENST00000556432 SDF2L1Q9HCN8 221 aa9.08□□□□□ -0.96
ACTN1-219ENST00000556432 RPH3ALQ9UNE2 315 aa9.08□□□□□ -0.96
ACTN1-219ENST00000556432 LRP2P98164 4655 aa9.08□□□□□ -0.96
ACTN1-219ENST00000556432 RNF222A6NCQ9 220 aa9.07□□□□□ -0.96
ACTN1-219ENST00000556432 TYMSP04818 313 aa9.07□□□□□ -0.96
ACTN1-219ENST00000556432 RANP62826 216 aaKnown RBP9.07□□□□□ -0.96
ACTN1-219ENST00000556432 URGCP-MRPS24S4R325 110 aa9.07□□□□□ -0.96
ACTN1-219ENST00000556432 OR7C2O60412 319 aa9.06□□□□□ -0.96
ACTN1-219ENST00000556432 PVALBP20472 110 aaPredicted RBP9.06□□□□□ -0.96
ACTN1-219ENST00000556432 S100A11P31949 105 aa9.06□□□□□ -0.96
ACTN1-219ENST00000556432 HBG1P69891 147 aa9.06□□□□□ -0.96
ACTN1-219ENST00000556432 HBG2P69892 147 aa9.06□□□□□ -0.96
ACTN1-219ENST00000556432 CFAP126Q5VTH2 177 aa9.06□□□□□ -0.96
ACTN1-219ENST00000556432 STX12Q86Y82 276 aa9.06□□□□□ -0.96
ACTN1-219ENST00000556432 FAM167A-AS1Q96KT0 104 aa9.06□□□□□ -0.96
ACTN1-219ENST00000556432 LENEPQ9Y5L5 61 aa9.06□□□□□ -0.96
ACTN1-219ENST00000556432 TRAV21A0A0B4J279 112 aa9.05□□□□□ -0.96
ACTN1-219ENST00000556432 GAGE12JA6NER3 117 aa9.05□□□□□ -0.96
ACTN1-219ENST00000556432 F6UZH7 168 aa9.05□□□□□ -0.96
ACTN1-219ENST00000556432 CIDEAO60543 219 aa9.05□□□□□ -0.96
ACTN1-219ENST00000556432 SULT1A1P50225 295 aa9.05□□□□□ -0.96
ACTN1-219ENST00000556432 S100A10P60903 97 aa9.05□□□□□ -0.96
ACTN1-219ENST00000556432 GAGE1Q13065 139 aa9.05□□□□□ -0.96
ACTN1-219ENST00000556432 GAGE4Q13068 117 aa9.05□□□□□ -0.96
ACTN1-219ENST00000556432 GAGE5Q13069 117 aa9.05□□□□□ -0.96
ACTN1-219ENST00000556432 GAGE13Q4V321 117 aa9.05□□□□□ -0.96
ACTN1-219ENST00000556432 ASB13Q8WXK3 278 aa9.05□□□□□ -0.96
ACTN1-219ENST00000556432 FXYD5Q96DB9 178 aa9.05□□□□□ -0.96
ACTN1-219ENST00000556432 HYLS1Q96M11 299 aa9.05□□□□□ -0.96
ACTN1-219ENST00000556432 NPCDR1Q9BY65 106 aa9.05□□□□□ -0.96
ACTN1-219ENST00000556432 DIRC3C9JPN6 131 aa9.04□□□□□ -0.96
ACTN1-219ENST00000556432 SEC11BP0C7V7 166 aa9.04□□□□□ -0.96
ACTN1-219ENST00000556432 MGST1P10620 155 aaKnown RBP9.04□□□□□ -0.96
ACTN1-219ENST00000556432 DEFA1P59665 94 aa9.04□□□□□ -0.96
ACTN1-219ENST00000556432 DEFA3P59666 94 aa9.04□□□□□ -0.96
ACTN1-219ENST00000556432 C14orf177Q52M58 125 aa9.04□□□□□ -0.96
ACTN1-219ENST00000556432 CHAC2Q8WUX2 184 aa9.04□□□□□ -0.96
ACTN1-219ENST00000556432 UBE2WQ96B02 151 aa9.04□□□□□ -0.96
ACTN1-219ENST00000556432 KCNS1Q96KK3 526 aa9.04□□□□□ -0.96
ACTN1-219ENST00000556432 DNAJC30Q96LL9 226 aa9.04□□□□□ -0.96
ACTN1-219ENST00000556432 PKHD1L1Q86WI1 4243 aa9.03□□□□□ -0.96
ACTN1-219ENST00000556432 IGSF23A1L1A6 192 aa9.03□□□□□ -0.96
ACTN1-219ENST00000556432 INMT-MINDY4F8WBC2 141 aa9.03□□□□□ -0.96
ACTN1-219ENST00000556432 UBE2L3P68036 154 aaKnown RBP9.03□□□□□ -0.96
ACTN1-219ENST00000556432 DPPA3Q6W0C5 159 aa9.03□□□□□ -0.96
ACTN1-219ENST00000556432 Q6ZRU5 148 aa9.03□□□□□ -0.96
ACTN1-219ENST00000556432 THAP6Q8TBB0 222 aa9.03□□□□□ -0.96
ACTN1-219ENST00000556432 C2orf50Q96LR7 162 aa9.03□□□□□ -0.96
ACTN1-219ENST00000556432 KLK12Q9UKR0 248 aa9.03□□□□□ -0.96
ACTN1-219ENST00000556432 A0A087WWC5 75 aa9.02□□□□□ -0.97
ACTN1-219ENST00000556432 CMTM2Q8TAZ6 248 aa9.02□□□□□ -0.97
ACTN1-219ENST00000556432 NMES1Q9C002 83 aa9.02□□□□□ -0.97
ACTN1-219ENST00000556432 LYRM2Q9NU23 88 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-219ENST00000556432 SIX6O95475 246 aa9.01□□□□□ -0.97
ACTN1-219ENST00000556432 ATP6V1FQ16864 119 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms