RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 CYTL1Q9NRR1 136 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-239ENST00000556315 UQCC1Q9NVA1 299 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 STRAPQ9Y3F4 350 aaKnown RBP3.25□□□□□ -1.89
ATXN3-239ENST00000556315 TRAV12-2A0A075B6T6 113 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 DUXBA0A1W2PPF3 345 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 ZNF98A6NK75 572 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 ZFP92A6NM28 416 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 FAM25EA8MYX2 175 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 E5RGE8 158 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 H7BYZ3 331 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 NDUFS6O75380 124 aaKnown RBP3.24□□□□□ -1.89
ATXN3-239ENST00000556315 MT-ND4LP03901 98 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 FABP1P07148 127 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 AKR1C4P17516 323 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 LINC01547P58512 204 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-239ENST00000556315 RAB5BP61020 215 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 RND3P61587 244 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 RHOBP62745 196 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 CTAG1AP78358 180 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 AARDQ4LEZ3 155 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 CCDC71LQ8N9Z2 235 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 MARCH1Q8TCQ1 289 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 RNASE8Q8TDE3 154 aaKnown RBP3.24□□□□□ -1.89
ATXN3-239ENST00000556315 GLYATL2Q8WU03 294 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 PCNPQ8WW12 178 aaKnown RBP3.24□□□□□ -1.89
ATXN3-239ENST00000556315 VSIG2Q96IQ7 327 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 RTBDNQ9BSG5 229 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-239ENST00000556315 CACFD1Q9UGQ2 172 aa3.24□□□□□ -1.89
ATXN3-239ENST00000556315 IGLV9-49A0A0B4J1Y8 123 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 C3orf85A0A1B0GTC6 90 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 CRYM-AS1A6NIL9 109 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 CEBPZOSA8MTT3 80 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 SNURFLB1AK76 121 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 UMAD1C9J7I0 102 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 K7EPK0 472 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 CDS2O95674 445 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 S100A9P06702 114 aaKnown RBP3.23□□□□□ -1.89
ATXN3-239ENST00000556315 SMIM6P0DI80 62 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 EVI2AP22794 236 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 RPL12P30050 165 aaKnown RBP3.23□□□□□ -1.89
ATXN3-239ENST00000556315 S100A7P31151 101 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 GPX4P36969 197 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-239ENST00000556315 ATP5IP56385 69 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-239ENST00000556315 PIGPP57054 158 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 KRTAP10-5P60370 271 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 LYZP61626 148 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 ZNF90Q03938 601 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 RHEBQ15382 184 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 KIAA1644Q3SXP7 199 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 LRRC37A5PQ49AS3 106 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 ATRAIDQ6UW56 229 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 LYPD5Q6UWN5 251 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 DPPA3Q6W0C5 159 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 FAM219AQ8IW50 185 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 LGI3Q8N145 548 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 OR4D5Q8NGN0 318 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 OR1B1Q8NGR6 318 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 RNASE11Q8TAA1 199 aaKnown RBP3.23□□□□□ -1.89
ATXN3-239ENST00000556315 GPR82Q96P67 336 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 TP53RKQ96S44 253 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 C20orf144Q9BQM9 153 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 SLC25A39Q9BZJ4 359 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-239ENST00000556315 TREM1Q9NP99 234 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 LY96Q9Y6Y9 160 aa3.23□□□□□ -1.89
ATXN3-239ENST00000556315 TRGV2A0A075B6R0 118 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 IGKV1D-37A0A075B6S9 117 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 TRAV8-2A0A0B4J237 113 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 A0A0G2JRQ6 117 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 LRCOL1A6NCL2 159 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 FAM74A7A6NL05 159 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 C1orf196B1AJZ1 125 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 CCSO14618 274 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 ZNF324O75467 553 aaPredicted RBP3.22□□□□□ -1.89
ATXN3-239ENST00000556315 OR5AC1P0C628 307 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 SLC25A6P12236 298 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 CDKN1BP46527 198 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 RAB2AP61019 212 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 HIST1H1AQ02539 215 aaPredicted RBP3.22□□□□□ -1.89
ATXN3-239ENST00000556315 BAXQ07812 192 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 DAZ2Q13117 558 aaKnown RBP3.22□□□□□ -1.89
ATXN3-239ENST00000556315 SLAQ13239 276 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 ZNF266Q14584 549 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 IAH1Q2TAA2 248 aaPredicted RBP3.22□□□□□ -1.89
ATXN3-239ENST00000556315 SP6Q3SY56 376 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 FAM74A3Q4VXF1 159 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 NMSQ5H8A3 153 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 FAM74A1Q5RGS3 127 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 DNLZQ5SXM8 178 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 GFI1BQ5VTD9 330 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 C10orf126Q8N4M7 172 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 THAP8Q8NA92 274 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 ZNF738Q8NE65 137 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 OR8A1Q8NGG7 326 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 IL22RA2Q969J5 263 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 SLC35E1Q96K37 410 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 SLC25A31Q9H0C2 315 aa3.22□□□□□ -1.89
ATXN3-239ENST00000556315 NAA60Q9H7X0 242 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms