RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 PQLC2Q6ZP29 291 aa12.72□□□□□ -0.37
CDKN3-209ENST00000556102 GOLT1AQ6ZVE7 132 aa12.72□□□□□ -0.37
CDKN3-209ENST00000556102 SH2D6Q7Z4S9 175 aa12.72□□□□□ -0.37
CDKN3-209ENST00000556102 MARVELD1Q9BSK0 173 aa12.72□□□□□ -0.37
CDKN3-209ENST00000556102 TYMSP04818 313 aa12.71□□□□□ -0.37
CDKN3-209ENST00000556102 CRYGDP07320 174 aa12.71□□□□□ -0.37
CDKN3-209ENST00000556102 KRTAP10-1P60331 282 aa12.71□□□□□ -0.37
CDKN3-209ENST00000556102 ACOT6Q3I5F7 207 aaPredicted RBP12.71□□□□□ -0.37
CDKN3-209ENST00000556102 HERC1Q15751 4861 aa12.71□□□□□ -0.38
CDKN3-209ENST00000556102 LOC100131303A0A0U1RQF7 123 aa12.7□□□□□ -0.38
CDKN3-209ENST00000556102 A0A1W2PPV4 95 aa12.7□□□□□ -0.38
CDKN3-209ENST00000556102 F6UZH7 168 aa12.7□□□□□ -0.38
CDKN3-209ENST00000556102 SSNA1O43805 119 aa12.7□□□□□ -0.38
CDKN3-209ENST00000556102 TIRAPP58753 221 aa12.7□□□□□ -0.38
CDKN3-209ENST00000556102 TVP23CQ96ET8 276 aa12.7□□□□□ -0.38
CDKN3-209ENST00000556102 KCNS1Q96KK3 526 aa12.7□□□□□ -0.38
CDKN3-209ENST00000556102 SDF2L1Q9HCN8 221 aa12.7□□□□□ -0.38
CDKN3-209ENST00000556102 TREM1Q9NP99 234 aa12.7□□□□□ -0.38
CDKN3-209ENST00000556102 TRAV8-1A0A0A6YYK1 113 aa12.69□□□□□ -0.38
CDKN3-209ENST00000556102 GATA1P15976 413 aaPredicted RBP12.69□□□□□ -0.38
CDKN3-209ENST00000556102 NHLRC2Q8NBF2 726 aa12.69□□□□□ -0.38
CDKN3-209ENST00000556102 WFDC1Q9HC57 220 aa12.69□□□□□ -0.38
CDKN3-209ENST00000556102 VPS13BQ7Z7G8 4022 aa12.68□□□□□ -0.38
CDKN3-209ENST00000556102 INAFM2P0DMQ5 153 aa12.68□□□□□ -0.38
CDKN3-209ENST00000556102 RAB2AP61019 212 aa12.68□□□□□ -0.38
CDKN3-209ENST00000556102 FRZBQ92765 325 aa12.68□□□□□ -0.38
CDKN3-209ENST00000556102 IGHV3-38A0A0C4DH36 116 aa12.67□□□□□ -0.38
CDKN3-209ENST00000556102 GCSHP23434 173 aa12.67□□□□□ -0.38
CDKN3-209ENST00000556102 PPT1P50897 306 aa12.67□□□□□ -0.38
CDKN3-209ENST00000556102 GNG5P63218 68 aa12.67□□□□□ -0.38
CDKN3-209ENST00000556102 Q5VSD8 79 aa12.67□□□□□ -0.38
CDKN3-209ENST00000556102 ASB13Q8WXK3 278 aa12.67□□□□□ -0.38
CDKN3-209ENST00000556102 DMBT1Q9UGM3 2413 aaPredicted RBP12.67□□□□□ -0.38
CDKN3-209ENST00000556102 FBLL1A6NHQ2 334 aaKnown RBP12.66□□□□□ -0.38
CDKN3-209ENST00000556102 NDFIP1Q9BT67 221 aa12.66□□□□□ -0.38
CDKN3-209ENST00000556102 SERTM2A0A1B0GWG4 89 aa12.65□□□□□ -0.38
CDKN3-209ENST00000556102 HMGB3O15347 200 aaKnown RBP12.65□□□□□ -0.38
CDKN3-209ENST00000556102 PFN1P07737 140 aaKnown RBP12.65□□□□□ -0.38
CDKN3-209ENST00000556102 LINC01556Q5JQF7 62 aa12.65□□□□□ -0.38
CDKN3-209ENST00000556102 OR10G9Q8NGN4 311 aa12.65□□□□□ -0.38
CDKN3-209ENST00000556102 OR10G7Q8NGN6 311 aa12.65□□□□□ -0.38
CDKN3-209ENST00000556102 BOLA1Q9Y3E2 137 aa12.65□□□□□ -0.38
CDKN3-209ENST00000556102 PSCAO43653 123 aa12.64□□□□□ -0.39
CDKN3-209ENST00000556102 CIDEAO60543 219 aa12.64□□□□□ -0.39
CDKN3-209ENST00000556102 ARL14EPLP0DKL9 152 aa12.64□□□□□ -0.39
CDKN3-209ENST00000556102 DEFA1P59665 94 aa12.64□□□□□ -0.39
CDKN3-209ENST00000556102 DEFA3P59666 94 aa12.64□□□□□ -0.39
CDKN3-209ENST00000556102 ZNF876PQ49A33 203 aa12.64□□□□□ -0.39
CDKN3-209ENST00000556102 SLC25A29Q8N8R3 303 aa12.64□□□□□ -0.39
CDKN3-209ENST00000556102 TRAV8-6A0A0B4J262 113 aa12.63□□□□□ -0.39
CDKN3-209ENST00000556102 LRCOL1A6NCL2 159 aa12.63□□□□□ -0.39
CDKN3-209ENST00000556102 IBA57-AS1B1ANH7 110 aa12.63□□□□□ -0.39
CDKN3-209ENST00000556102 RS1O15537 224 aa12.63□□□□□ -0.39
CDKN3-209ENST00000556102 CDC34P49427 236 aaPredicted RBP12.63□□□□□ -0.39
CDKN3-209ENST00000556102 RHOHQ15669 191 aa12.63□□□□□ -0.39
CDKN3-209ENST00000556102 CFAP126Q5VTH2 177 aa12.63□□□□□ -0.39
CDKN3-209ENST00000556102 C5orf17Q8NAS9 161 aa12.63□□□□□ -0.39
CDKN3-209ENST00000556102 NTN5Q8WTR8 489 aaPredicted RBP12.63□□□□□ -0.39
CDKN3-209ENST00000556102 SGK494Q96LW2 274 aa12.63□□□□□ -0.39
CDKN3-209ENST00000556102 PRADC1Q9BSG0 188 aa12.63□□□□□ -0.39
CDKN3-209ENST00000556102 IGLV5-52A0A0A0MRZ9 124 aa12.62□□□□□ -0.39
CDKN3-209ENST00000556102 TRBV6-4A0A1B0GX49 114 aa12.62□□□□□ -0.39
CDKN3-209ENST00000556102 TCRAP04437 139 aa12.62□□□□□ -0.39
CDKN3-209ENST00000556102 STAG3L2P0CL84 134 aa12.62□□□□□ -0.39
CDKN3-209ENST00000556102 STAG3L3P0CL85 134 aa12.62□□□□□ -0.39
CDKN3-209ENST00000556102 ZNF80P51504 273 aaPredicted RBP12.62□□□□□ -0.39
CDKN3-209ENST00000556102 C11orf21Q9P2W6 132 aa12.62□□□□□ -0.39
CDKN3-209ENST00000556102 K7EQM0 130 aa12.61□□□□□ -0.39
CDKN3-209ENST00000556102 TAAR5O14804 337 aa12.61□□□□□ -0.39
CDKN3-209ENST00000556102 OR10J3Q5JRS4 329 aa12.61□□□□□ -0.39
CDKN3-209ENST00000556102 DPPA3Q6W0C5 159 aa12.61□□□□□ -0.39
CDKN3-209ENST00000556102 OR2G3Q8NGZ4 309 aa12.61□□□□□ -0.39
CDKN3-209ENST00000556102 C9orf85Q96MD7 179 aa12.61□□□□□ -0.39
CDKN3-209ENST00000556102 GCGP01275 180 aa12.6□□□□□ -0.39
CDKN3-209ENST00000556102 SMR3BP02814 79 aaPredicted RBP12.6□□□□□ -0.39
CDKN3-209ENST00000556102 LELP1Q5T871 98 aa12.6□□□□□ -0.39
CDKN3-209ENST00000556102 SUN5Q8TC36 379 aa12.6□□□□□ -0.39
CDKN3-209ENST00000556102 PTH2Q96A98 100 aa12.6□□□□□ -0.39
CDKN3-209ENST00000556102 TMEM70Q9BUB7 260 aa12.6□□□□□ -0.39
CDKN3-209ENST00000556102 Q9HAA7 133 aa12.6□□□□□ -0.39
CDKN3-209ENST00000556102 PSG8Q9UQ74 426 aa12.6□□□□□ -0.39
CDKN3-209ENST00000556102 FLG2Q5D862 2391 aaPredicted RBP12.59□□□□□ -0.39
CDKN3-209ENST00000556102 IGHV3-73A0A0B4J1V6 119 aa12.59□□□□□ -0.39
CDKN3-209ENST00000556102 A6NHS1 94 aa12.59□□□□□ -0.39
CDKN3-209ENST00000556102 GCHFRP30047 84 aa12.59□□□□□ -0.39
CDKN3-209ENST00000556102 SMUG1Q53HV7 270 aa12.59□□□□□ -0.39
CDKN3-209ENST00000556102 ZNF506Q5JVG8 444 aa12.59□□□□□ -0.39
CDKN3-209ENST00000556102 TMEM75Q8N9X5 138 aa12.59□□□□□ -0.39
CDKN3-209ENST00000556102 HSD17B11Q8NBQ5 300 aa12.59□□□□□ -0.39
CDKN3-209ENST00000556102 RAB24Q969Q5 203 aa12.59□□□□□ -0.39
CDKN3-209ENST00000556102 MYCBP2O75592 4640 aa12.59□□□□□ -0.39
CDKN3-209ENST00000556102 PGPEP1LA6NFU8 196 aa12.58□□□□□ -0.4
CDKN3-209ENST00000556102 FLI1Q01543 452 aaPredicted RBP12.58□□□□□ -0.4
CDKN3-209ENST00000556102 ZFP69Q49AA0 526 aa12.58□□□□□ -0.4
CDKN3-209ENST00000556102 Q8N814 137 aa12.58□□□□□ -0.4
CDKN3-209ENST00000556102 PSMG3Q9BT73 122 aaPredicted RBP12.58□□□□□ -0.4
CDKN3-209ENST00000556102 GTSF1LQ9H1H1 148 aa12.58□□□□□ -0.4
CDKN3-209ENST00000556102 DNAH8Q96JB1 4490 aa12.57□□□□□ -0.4
CDKN3-209ENST00000556102 FAM229AH3BQW9 127 aa12.57□□□□□ -0.4
CDKN3-209ENST00000556102 IGLV2-11P01706 119 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms