RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 VPS13BQ7Z7G8 4022 aa11.38□□□□□ -0.59
XRCC3-215ENST00000555964 LRCOL1A6NCL2 159 aa11.38□□□□□ -0.59
XRCC3-215ENST00000555964 IBA57-AS1B1ANH7 110 aa11.38□□□□□ -0.59
XRCC3-215ENST00000555964 J3QL48 77 aa11.38□□□□□ -0.59
XRCC3-215ENST00000555964 C1QBP02746 253 aa11.38□□□□□ -0.59
XRCC3-215ENST00000555964 GATA1P15976 413 aaPredicted RBP11.38□□□□□ -0.59
XRCC3-215ENST00000555964 CYCSP99999 105 aaKnown RBP11.38□□□□□ -0.59
XRCC3-215ENST00000555964 OR10J3Q5JRS4 329 aa11.38□□□□□ -0.59
XRCC3-215ENST00000555964 ARL6IP6Q8N6S5 226 aa11.38□□□□□ -0.59
XRCC3-215ENST00000555964 Q8N814 137 aa11.38□□□□□ -0.59
XRCC3-215ENST00000555964 SH3BGRL3Q9H299 93 aa11.38□□□□□ -0.59
XRCC3-215ENST00000555964 IGHV3-16A0A0C4DH30 117 aa11.37□□□□□ -0.59
XRCC3-215ENST00000555964 FBLL1A6NHQ2 334 aaKnown RBP11.37□□□□□ -0.59
XRCC3-215ENST00000555964 RHOHQ15669 191 aa11.37□□□□□ -0.59
XRCC3-215ENST00000555964 FFAR4Q5NUL3 377 aa11.37□□□□□ -0.59
XRCC3-215ENST00000555964 HYLS1Q96M11 299 aa11.37□□□□□ -0.59
XRCC3-215ENST00000555964 TM2D2Q9BX73 214 aa11.37□□□□□ -0.59
XRCC3-215ENST00000555964 LAGE3Q14657 143 aa11.36□□□□□ -0.59
XRCC3-215ENST00000555964 LRRC37A5PQ49AS3 106 aa11.36□□□□□ -0.59
XRCC3-215ENST00000555964 SCGB1C1Q8TD33 95 aa11.36□□□□□ -0.59
XRCC3-215ENST00000555964 Q9HAA7 133 aa11.36□□□□□ -0.59
XRCC3-215ENST00000555964 RPH3ALQ9UNE2 315 aa11.36□□□□□ -0.59
XRCC3-215ENST00000555964 LOC100131303A0A0U1RQF7 123 aa11.35□□□□□ -0.59
XRCC3-215ENST00000555964 PLA2G1BP04054 148 aaKnown RBP11.35□□□□□ -0.59
XRCC3-215ENST00000555964 TYMSP04818 313 aa11.35□□□□□ -0.59
XRCC3-215ENST00000555964 PET100P0DJ07 73 aa11.35□□□□□ -0.59
XRCC3-215ENST00000555964 ASB13Q8WXK3 278 aa11.35□□□□□ -0.59
XRCC3-215ENST00000555964 NDFIP1Q9BT67 221 aa11.35□□□□□ -0.59
XRCC3-215ENST00000555964 TREM1Q9NP99 234 aa11.35□□□□□ -0.59
XRCC3-215ENST00000555964 OR5AC2Q9NZP5 309 aa11.35□□□□□ -0.59
XRCC3-215ENST00000555964 MYCBP2O75592 4640 aa11.35□□□□□ -0.59
XRCC3-215ENST00000555964 TRBV6-4A0A1B0GX49 114 aa11.34□□□□□ -0.59
XRCC3-215ENST00000555964 PGPA6NDG6 321 aa11.34□□□□□ -0.59
XRCC3-215ENST00000555964 GNRH2O43555 120 aa11.34□□□□□ -0.59
XRCC3-215ENST00000555964 HAMPP81172 84 aa11.34□□□□□ -0.59
XRCC3-215ENST00000555964 LELP1Q5T871 98 aa11.34□□□□□ -0.59
XRCC3-215ENST00000555964 PQLC2Q6ZP29 291 aa11.34□□□□□ -0.59
XRCC3-215ENST00000555964 ENKURQ8TC29 256 aa11.34□□□□□ -0.59
XRCC3-215ENST00000555964 NDUFA13Q9P0J0 144 aa11.34□□□□□ -0.59
XRCC3-215ENST00000555964 MBD2Q9UBB5 411 aa11.34□□□□□ -0.59
XRCC3-215ENST00000555964 ZNF876PQ49A33 203 aa11.33□□□□□ -0.6
XRCC3-215ENST00000555964 GOLT1AQ6ZVE7 132 aa11.33□□□□□ -0.6
XRCC3-215ENST00000555964 SLC25A29Q8N8R3 303 aa11.33□□□□□ -0.6
XRCC3-215ENST00000555964 SRRM2Q9UQ35 2752 aaKnown RBP11.33□□□□□ -0.6
XRCC3-215ENST00000555964 SERTM2A0A1B0GWG4 89 aa11.32□□□□□ -0.6
XRCC3-215ENST00000555964 F6UZH7 168 aa11.32□□□□□ -0.6
XRCC3-215ENST00000555964 ASAH1Q13510 395 aa11.32□□□□□ -0.6
XRCC3-215ENST00000555964 HSPB11Q9Y547 144 aa11.32□□□□□ -0.6
XRCC3-215ENST00000555964 A0A1W2PPV4 95 aa11.31□□□□□ -0.6
XRCC3-215ENST00000555964 H0YIZ8 118 aa11.31□□□□□ -0.6
XRCC3-215ENST00000555964 SIX6O95475 246 aa11.31□□□□□ -0.6
XRCC3-215ENST00000555964 IGHV3-30P01768 117 aa11.31□□□□□ -0.6
XRCC3-215ENST00000555964 IGHV3-33P01772 117 aa11.31□□□□□ -0.6
XRCC3-215ENST00000555964 IGHV3-30-3P0DP02 117 aa11.31□□□□□ -0.6
XRCC3-215ENST00000555964 IGHV3-30-5P0DP03 117 aa11.31□□□□□ -0.6
XRCC3-215ENST00000555964 MGST1P10620 155 aaKnown RBP11.31□□□□□ -0.6
XRCC3-215ENST00000555964 ACOT6Q3I5F7 207 aaPredicted RBP11.31□□□□□ -0.6
XRCC3-215ENST00000555964 TOR2AQ5JU69 321 aa11.31□□□□□ -0.6
XRCC3-215ENST00000555964 GTSF1LQ9H1H1 148 aa11.31□□□□□ -0.6
XRCC3-215ENST00000555964 TRAV8-3A0A0A6YYJ7 113 aa11.3□□□□□ -0.6
XRCC3-215ENST00000555964 K7EQM0 130 aa11.3□□□□□ -0.6
XRCC3-215ENST00000555964 RS1O15537 224 aa11.3□□□□□ -0.6
XRCC3-215ENST00000555964 CFAP126Q5VTH2 177 aa11.3□□□□□ -0.6
XRCC3-215ENST00000555964 LINC00299Q6ZSB3 139 aa11.3□□□□□ -0.6
XRCC3-215ENST00000555964 ATP6V0E2Q8NHE4 81 aa11.3□□□□□ -0.6
XRCC3-215ENST00000555964 TAAR5O14804 337 aa11.29□□□□□ -0.6
XRCC3-215ENST00000555964 ZFP69Q49AA0 526 aa11.29□□□□□ -0.6
XRCC3-215ENST00000555964 PPP1R1CQ8WVI7 109 aa11.29□□□□□ -0.6
XRCC3-215ENST00000555964 S100ZQ8WXG8 99 aa11.29□□□□□ -0.6
XRCC3-215ENST00000555964 COX11Q9Y6N1 276 aa11.29□□□□□ -0.6
XRCC3-215ENST00000555964 TRAV8-1A0A0A6YYK1 113 aa11.28□□□□□ -0.6
XRCC3-215ENST00000555964 DEFB104AQ8WTQ1 72 aa11.28□□□□□ -0.6
XRCC3-215ENST00000555964 PTH2Q96A98 100 aa11.28□□□□□ -0.6
XRCC3-215ENST00000555964 Q6ZSA8 131 aa11.27□□□□□ -0.61
XRCC3-215ENST00000555964 TVP23CQ96ET8 276 aa11.27□□□□□ -0.61
XRCC3-215ENST00000555964 SMIM3Q9BZL3 60 aa11.27□□□□□ -0.61
XRCC3-215ENST00000555964 FAM30AQ9NZY2 134 aa11.27□□□□□ -0.61
XRCC3-215ENST00000555964 SEC11BP0C7V7 166 aa11.26□□□□□ -0.61
XRCC3-215ENST00000555964 RPL12P30050 165 aaKnown RBP11.26□□□□□ -0.61
XRCC3-215ENST00000555964 LINC00528Q8N1L1 170 aa11.26□□□□□ -0.61
XRCC3-215ENST00000555964 C5orf17Q8NAS9 161 aa11.26□□□□□ -0.61
XRCC3-215ENST00000555964 RMI2Q96E14 147 aa11.26□□□□□ -0.61
XRCC3-215ENST00000555964 C9orf85Q96MD7 179 aa11.26□□□□□ -0.61
XRCC3-215ENST00000555964 A0A087WWC5 75 aa11.25□□□□□ -0.61
XRCC3-215ENST00000555964 IGHV3-73A0A0B4J1V6 119 aa11.25□□□□□ -0.61
XRCC3-215ENST00000555964 KRTAP29-1A8MX34 341 aaPredicted RBP11.25□□□□□ -0.61
XRCC3-215ENST00000555964 GGTLC3B5MD39 225 aa11.25□□□□□ -0.61
XRCC3-215ENST00000555964 MPC2O95563 127 aa11.25□□□□□ -0.61
XRCC3-215ENST00000555964 GNG5P63218 68 aa11.25□□□□□ -0.61
XRCC3-215ENST00000555964 ZNF506Q5JVG8 444 aa11.25□□□□□ -0.61
XRCC3-215ENST00000555964 A8MWV9 139 aa11.24□□□□□ -0.61
XRCC3-215ENST00000555964 INMT-MINDY4F8WBC2 141 aa11.24□□□□□ -0.61
XRCC3-215ENST00000555964 GCGP01275 180 aa11.24□□□□□ -0.61
XRCC3-215ENST00000555964 H2BFSP57053 126 aa11.24□□□□□ -0.61
XRCC3-215ENST00000555964 SMUG1Q53HV7 270 aa11.24□□□□□ -0.61
XRCC3-215ENST00000555964 PIK3CD-AS1Q5SR53 167 aa11.24□□□□□ -0.61
XRCC3-215ENST00000555964 ZFP2Q6ZN57 461 aa11.24□□□□□ -0.61
XRCC3-215ENST00000555964 SSNA1O43805 119 aa11.23□□□□□ -0.61
XRCC3-215ENST00000555964 TCRAP04437 139 aa11.23□□□□□ -0.61
XRCC3-215ENST00000555964 ARL14EPLP0DKL9 152 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms