RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 SMIM11AP58511 58 aa1.91□□□□□ -2.1
MTHFD1-212ENST00000555858 UBE2G1P62253 170 aa1.91□□□□□ -2.1
MTHFD1-212ENST00000555858 SSBP1Q04837 148 aaKnown RBP1.91□□□□□ -2.1
MTHFD1-212ENST00000555858 LINC01554Q52M75 96 aa1.91□□□□□ -2.1
MTHFD1-212ENST00000555858 LCE3CQ5T5A8 94 aa1.91□□□□□ -2.1
MTHFD1-212ENST00000555858 C2orf91Q6ZV80 131 aa1.91□□□□□ -2.1
MTHFD1-212ENST00000555858 SCXQ7RTU7 201 aa1.91□□□□□ -2.1
MTHFD1-212ENST00000555858 LINC00643Q86TS7 51 aa1.91□□□□□ -2.1
MTHFD1-212ENST00000555858 Q8N8P6 123 aa1.91□□□□□ -2.1
MTHFD1-212ENST00000555858 C10orf105Q8TEF2 133 aa1.91□□□□□ -2.1
MTHFD1-212ENST00000555858 ODF3Q96PU9 254 aa1.91□□□□□ -2.1
MTHFD1-212ENST00000555858 NMES1Q9C002 83 aa1.91□□□□□ -2.1
MTHFD1-212ENST00000555858 TAS2R4Q9NYW5 299 aa1.91□□□□□ -2.1
MTHFD1-212ENST00000555858 TRAPPC1Q9Y5R8 145 aa1.91□□□□□ -2.1
MTHFD1-212ENST00000555858 LRP5O75197 1615 aa1.91□□□□□ -2.1
MTHFD1-212ENST00000555858 TRIP11Q15643 1979 aa1.9□□□□□ -2.1
MTHFD1-212ENST00000555858 FER1L6Q2WGJ9 1857 aa1.9□□□□□ -2.1
MTHFD1-212ENST00000555858 RGPD2P0DJD1 1756 aa1.9□□□□□ -2.1
MTHFD1-212ENST00000555858 FAM208AQ9UK61 1670 aaKnown RBP1.9□□□□□ -2.1
MTHFD1-212ENST00000555858 ADGRB2O60241 1585 aa1.9□□□□□ -2.1
MTHFD1-212ENST00000555858 MED1Q15648 1581 aaPredicted RBP1.9□□□□□ -2.1
MTHFD1-212ENST00000555858 CHD3Q12873 2000 aaKnown RBP1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 IGHV3-49A0A0A0MS15 119 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 TRAV1-1A0A0B4J248 108 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 A0A1B0GVY2 172 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 IBA57-AS1B1ANH7 110 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 ZNF736B4DX44 427 aaPredicted RBP1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 IGLV3-25P01717 112 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 PRM2P04554 102 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 CISD3P0C7P0 127 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 SAA1P0DJI8 122 aaPredicted RBP1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 RNASE4P34096 147 aaKnown RBP1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 NOVP48745 357 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 FGF12P61328 243 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 PCBD1P61457 104 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 Q5W150 140 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 FAM104BQ5XKR9 115 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 RPL7L1Q6DKI1 246 aaKnown RBP1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 ZFP2Q6ZN57 461 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 ATP11AUNQ6ZP68 121 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 Q6ZQT7 251 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 Q6ZR03 302 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 PRNTQ86SH4 94 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 BAGE3Q86Y29 109 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 BAGE2Q86Y30 109 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 GPHB5Q86YW7 130 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 Q8N9L7 120 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 LINC01560Q8TB33 94 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 CIRBP-AS1Q8TBR5 109 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 SPTSSAQ969W0 71 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 RMI2Q96E14 147 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 CHCHD7Q9BUK0 85 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 XAGE1AQ9HD64 81 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 IL36BQ9NZH7 164 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 ABRACLQ9P1F3 81 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 FMN2Q9NZ56 1722 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 MYO10Q9HD67 2058 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 ANKRD31Q8N7Z5 1873 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 TANC1Q9C0D5 1861 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 DOCK5Q9H7D0 1870 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 RGPD8O14715 1765 aaPredicted RBP1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 RGPD4Q7Z3J3 1758 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 RGPD5Q99666 1765 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 SCN1AP35498 2009 aa1.9□□□□□ -2.11
MTHFD1-212ENST00000555858 NCKAP5O14513 1909 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 MYH8P13535 1937 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 IGLV3-16A0A075B6K0 115 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 IGHV1-45A0A0A0MS14 117 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 IGKV6-21A0A0C4DH24 114 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 J3QLW9 94 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 K7ERJ3 54 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 CKS2P33552 79 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 ZNF791Q3KP31 576 aaPredicted RBP1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 DEFB121Q5J5C9 76 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 SLC48A1Q6P1K1 146 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 SDIM1Q6ZPB5 146 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 C3orf56Q8N813 242 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 UBALD1Q8TB05 177 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 PPP1R1CQ8WVI7 109 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 CYYR1Q96J86 154 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 ZNF714Q96N38 554 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 NPCDR1Q9BY65 106 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 CXCL16Q9H2A7 254 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 DYNLRB1Q9NP97 96 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 NXT2Q9NPJ8 142 aaKnown RBP1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 MRPL35Q9NZE8 188 aaKnown RBP1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 TAC3Q9UHF0 121 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 EPDR1Q9UM22 224 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 FANCMQ8IYD8 2048 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 NOTCH3Q9UM47 2321 aa1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 ZNF646O15015 1829 aaPredicted RBP1.89□□□□□ -2.11
MTHFD1-212ENST00000555858 LRP4O75096 1905 aa1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 ALPK3Q96L96 1907 aa1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 C3P01024 1663 aa1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 C5P01031 1676 aa1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 ADAMTS7Q9UKP4 1686 aa1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 IGHV3OR15-7A0A075B7D8 119 aa1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 TRAV3A0A0B4J244 114 aa1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 TCRBV4S1A1TA0A5B7 111 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms