RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 TRGC2P03986 189 aa7.52□□□□□ -1.2
SRP54-208ENST00000555557 RPL19P84098 196 aaKnown RBP7.52□□□□□ -1.2
SRP54-208ENST00000555557 PDZD11Q5EBL8 140 aa7.52□□□□□ -1.2
SRP54-208ENST00000555557 GFI1BQ5VTD9 330 aa7.52□□□□□ -1.2
SRP54-208ENST00000555557 COX8CQ7Z4L0 72 aa7.52□□□□□ -1.2
SRP54-208ENST00000555557 GTSCR1Q86UQ5 136 aa7.52□□□□□ -1.2
SRP54-208ENST00000555557 STHQ8IWL8 128 aa7.52□□□□□ -1.2
SRP54-208ENST00000555557 DAZAP1Q96EP5 407 aaKnown RBP7.52□□□□□ -1.2
SRP54-208ENST00000555557 LENEPQ9Y5L5 61 aa7.52□□□□□ -1.2
SRP54-208ENST00000555557 PKD1L1Q8TDX9 2849 aa7.52□□□□□ -1.2
SRP54-208ENST00000555557 TGIF2-C20orf24A0A0A6YYL0 155 aa7.52□□□□□ -1.21
SRP54-208ENST00000555557 ZNF705GA8MUZ8 300 aaPredicted RBP7.52□□□□□ -1.21
SRP54-208ENST00000555557 G3V4G9 280 aa7.52□□□□□ -1.21
SRP54-208ENST00000555557 M0R143 59 aa7.52□□□□□ -1.21
SRP54-208ENST00000555557 CRISP2P16562 243 aa7.52□□□□□ -1.21
SRP54-208ENST00000555557 PCP4P48539 62 aa7.52□□□□□ -1.21
SRP54-208ENST00000555557 CMC4P56277 68 aaPredicted RBP7.52□□□□□ -1.21
SRP54-208ENST00000555557 KRTAP10-11P60412 298 aa7.52□□□□□ -1.21
SRP54-208ENST00000555557 FAM162BQ5T6X4 162 aa7.52□□□□□ -1.21
SRP54-208ENST00000555557 ZNF664Q8N3J9 261 aa7.52□□□□□ -1.21
SRP54-208ENST00000555557 HIST1H2BLQ99880 126 aa7.52□□□□□ -1.21
SRP54-208ENST00000555557 OSTCQ9NRP0 149 aa7.52□□□□□ -1.21
SRP54-208ENST00000555557 V9GYV3 84 aa7.52□□□□□ -1.21
SRP54-208ENST00000555557 FABP5P3A8MUU1 101 aa7.51□□□□□ -1.21
SRP54-208ENST00000555557 H7BYZ3 331 aa7.51□□□□□ -1.21
SRP54-208ENST00000555557 P01737 135 aa7.51□□□□□ -1.21
SRP54-208ENST00000555557 G0S2P27469 103 aa7.51□□□□□ -1.21
SRP54-208ENST00000555557 FAM231DQ6ZW35 169 aa7.51□□□□□ -1.21
SRP54-208ENST00000555557 ANAPC16Q96DE5 110 aa7.51□□□□□ -1.21
SRP54-208ENST00000555557 FAM210BQ96KR6 192 aa7.51□□□□□ -1.21
SRP54-208ENST00000555557 FAM110AQ9BQ89 295 aa7.51□□□□□ -1.21
SRP54-208ENST00000555557 URGCP-MRPS24S4R325 110 aa7.51□□□□□ -1.21
SRP54-208ENST00000555557 TMSB15BA0A087X1C1 80 aa7.5□□□□□ -1.21
SRP54-208ENST00000555557 TRAV12-3A0A0B4J271 114 aa7.5□□□□□ -1.21
SRP54-208ENST00000555557 KLLNB2CW77 178 aa7.5□□□□□ -1.21
SRP54-208ENST00000555557 PFN1P07737 140 aaKnown RBP7.5□□□□□ -1.21
SRP54-208ENST00000555557 LINC00614P0C842 121 aa7.5□□□□□ -1.21
SRP54-208ENST00000555557 GZMBP10144 247 aa7.5□□□□□ -1.21
SRP54-208ENST00000555557 RPL35AP18077 110 aaKnown RBP7.5□□□□□ -1.21
SRP54-208ENST00000555557 LEPP41159 167 aa7.5□□□□□ -1.21
SRP54-208ENST00000555557 CDKN1BP46527 198 aa7.5□□□□□ -1.21
SRP54-208ENST00000555557 GAGE1Q13065 139 aa7.5□□□□□ -1.21
SRP54-208ENST00000555557 TRPT1Q86TN4 253 aaKnown RBP7.5□□□□□ -1.21
SRP54-208ENST00000555557 Q8N1Y9 231 aa7.5□□□□□ -1.21
SRP54-208ENST00000555557 FRZBQ92765 325 aa7.5□□□□□ -1.21
SRP54-208ENST00000555557 C11orf21Q9P2W6 132 aa7.5□□□□□ -1.21
SRP54-208ENST00000555557 TRBV7-9A0A0J9YWB2 115 aa7.5□□□□□ -1.21
SRP54-208ENST00000555557 A8MTW9 85 aa7.5□□□□□ -1.21
SRP54-208ENST00000555557 CRXO43186 299 aaPredicted RBP7.5□□□□□ -1.21
SRP54-208ENST00000555557 ORM1P02763 201 aa7.5□□□□□ -1.21
SRP54-208ENST00000555557 ZNF25P17030 456 aaPredicted RBP7.5□□□□□ -1.21
SRP54-208ENST00000555557 FAM3BP58499 235 aaPredicted RBP7.5□□□□□ -1.21
SRP54-208ENST00000555557 MRPL52Q86TS9 123 aaKnown RBP7.5□□□□□ -1.21
SRP54-208ENST00000555557 OR2D3Q8NGH3 330 aa7.5□□□□□ -1.21
SRP54-208ENST00000555557 ODF3Q96PU9 254 aa7.5□□□□□ -1.21
SRP54-208ENST00000555557 CTDSP1Q9GZU7 261 aa7.5□□□□□ -1.21
SRP54-208ENST00000555557 RPP21Q9H633 154 aaKnown RBP7.5□□□□□ -1.21
SRP54-208ENST00000555557 TMEM242Q9NWH2 141 aa7.5□□□□□ -1.21
SRP54-208ENST00000555557 GOLT1BQ9Y3E0 138 aa7.5□□□□□ -1.21
SRP54-208ENST00000555557 IGKV3D-20A0A0C4DH25 116 aa7.49□□□□□ -1.21
SRP54-208ENST00000555557 EREGO14944 169 aa7.49□□□□□ -1.21
SRP54-208ENST00000555557 TCL1AP56279 114 aa7.49□□□□□ -1.21
SRP54-208ENST00000555557 C21orf62-AS1Q17RA5 79 aa7.49□□□□□ -1.21
SRP54-208ENST00000555557 MUC21Q5SSG8 566 aa7.49□□□□□ -1.21
SRP54-208ENST00000555557 ZNF575Q86XF7 245 aa7.49□□□□□ -1.21
SRP54-208ENST00000555557 XCL2Q9UBD3 114 aa7.49□□□□□ -1.21
SRP54-208ENST00000555557 NAGKQ9UJ70 344 aa7.49□□□□□ -1.21
SRP54-208ENST00000555557 TRAV21A0A0B4J279 112 aa7.48□□□□□ -1.21
SRP54-208ENST00000555557 C7orf71A4D174 169 aa7.48□□□□□ -1.21
SRP54-208ENST00000555557 DLEU1O43261 78 aa7.48□□□□□ -1.21
SRP54-208ENST00000555557 ZNF324O75467 553 aaPredicted RBP7.48□□□□□ -1.21
SRP54-208ENST00000555557 RBMY1A1P0DJD3 496 aaKnown RBP7.48□□□□□ -1.21
SRP54-208ENST00000555557 RBMY1CP0DJD4 496 aa7.48□□□□□ -1.21
SRP54-208ENST00000555557 TSPOP30536 169 aa7.48□□□□□ -1.21
SRP54-208ENST00000555557 RBMY1FQ15415 496 aaKnown RBP7.48□□□□□ -1.21
SRP54-208ENST00000555557 Q6AWC8 147 aa7.48□□□□□ -1.21
SRP54-208ENST00000555557 SNHG12Q9BXW3 62 aa7.48□□□□□ -1.21
SRP54-208ENST00000555557 SRD5A3Q9H8P0 318 aa7.48□□□□□ -1.21
SRP54-208ENST00000555557 TRBV24-1A0A075B6N3 115 aa7.48□□□□□ -1.21
SRP54-208ENST00000555557 GRIFINA4D1Z8 144 aa7.48□□□□□ -1.21
SRP54-208ENST00000555557 TMEM189A5PLL7 270 aa7.48□□□□□ -1.21
SRP54-208ENST00000555557 EGFEM1PQ0D2K5 195 aa7.48□□□□□ -1.21
SRP54-208ENST00000555557 IL36BQ9NZH7 164 aa7.48□□□□□ -1.21
SRP54-208ENST00000555557 SPINK4O60575 86 aa7.47□□□□□ -1.21
SRP54-208ENST00000555557 AMBPP02760 352 aa7.47□□□□□ -1.21
SRP54-208ENST00000555557 PRM2P04554 102 aa7.47□□□□□ -1.21
SRP54-208ENST00000555557 GIG44P09565 113 aaPredicted RBP7.47□□□□□ -1.21
SRP54-208ENST00000555557 IQCJQ1A5X6 159 aa7.47□□□□□ -1.21
SRP54-208ENST00000555557 ANXA2RQ3ZCQ2 193 aa7.47□□□□□ -1.21
SRP54-208ENST00000555557 COA6Q5JTJ3 125 aaKnown RBP7.47□□□□□ -1.21
SRP54-208ENST00000555557 SAMD5Q5TGI4 173 aa7.47□□□□□ -1.21
SRP54-208ENST00000555557 GTSF1Q8WW33 167 aa7.47□□□□□ -1.21
SRP54-208ENST00000555557 CLUHP3Q96NS8 147 aa7.47□□□□□ -1.21
SRP54-208ENST00000555557 HTN1P15515 57 aa7.46□□□□□ -1.21
SRP54-208ENST00000555557 LINC01559Q495D7 138 aa7.46□□□□□ -1.21
SRP54-208ENST00000555557 TSKUQ8WUA8 353 aa7.46□□□□□ -1.21
SRP54-208ENST00000555557 NBEAL1Q6ZS30 2694 aa7.46□□□□□ -1.21
SRP54-208ENST00000555557 A0A1W2PPQ1 181 aa7.46□□□□□ -1.22
SRP54-208ENST00000555557 SMIM27A0A1W2PRY6 76 aa7.46□□□□□ -1.22
SRP54-208ENST00000555557 HIGD1CA8MV81 97 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms