RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 TRAPPC8Q9Y2L5 1435 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 CASZ1Q86V15 1759 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 CELSR2Q9HCU4 2923 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 UNC13BO14795 1591 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 KDM5CP41229 1560 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 LAMC3Q9Y6N6 1575 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.22□□□□□ -2.44
SRP54-207ENST00000555535 CFDP00746 253 aaPredicted RBP-0.22□□□□□ -2.44
SRP54-207ENST00000555535 SAA1P0DJI8 122 aaPredicted RBP-0.22□□□□□ -2.44
SRP54-207ENST00000555535 SLC25A4P12235 298 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 CRYGSP22914 178 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 CRYBA4P53673 196 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 HRCT1Q6UXD1 115 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 STX19Q8N4C7 294 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 NUP35Q8NFH5 326 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 OR5A2Q8NGI9 324 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 BRK1Q8WUW1 75 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 TMEM141Q96I45 108 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 HOPXQ9BPY8 73 aaPredicted RBP-0.22□□□□□ -2.44
SRP54-207ENST00000555535 ATG5Q9H1Y0 275 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 GID8Q9NWU2 228 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 STOML2Q9UJZ1 356 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 TRAPPC2LQ9UL33 140 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 UFC1Q9Y3C8 167 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 MPC1Q9Y5U8 109 aa-0.22□□□□□ -2.44
SRP54-207ENST00000555535 UNC79Q9P2D8 2635 aa-0.22□□□□□ -2.45
SRP54-207ENST00000555535 PHIPQ8WWQ0 1821 aa-0.22□□□□□ -2.45
SRP54-207ENST00000555535 SOGA1O94964 1423 aa-0.22□□□□□ -2.45
SRP54-207ENST00000555535 FAM135BQ49AJ0 1406 aa-0.22□□□□□ -2.45
SRP54-207ENST00000555535 PLCE1Q9P212 2302 aa-0.22□□□□□ -2.45
SRP54-207ENST00000555535 PTPRQQ9UMZ3 2332 aa-0.22□□□□□ -2.45
SRP54-207ENST00000555535 TRAV13-1A0A0B4J241 112 aa-0.23□□□□□ -2.45
SRP54-207ENST00000555535 IGHV1-24A0A0C4DH33 117 aa-0.23□□□□□ -2.45
SRP54-207ENST00000555535 ZNF670-ZNF695F2Z2N8 137 aa-0.23□□□□□ -2.45
SRP54-207ENST00000555535 NMBP08949 121 aa-0.23□□□□□ -2.45
SRP54-207ENST00000555535 POLR2JP52435 117 aaKnown RBP-0.23□□□□□ -2.45
SRP54-207ENST00000555535 TCTAP57738 103 aa-0.23□□□□□ -2.45
SRP54-207ENST00000555535 BLCAPP62952 87 aa-0.23□□□□□ -2.45
SRP54-207ENST00000555535 RHOHQ15669 191 aa-0.23□□□□□ -2.45
SRP54-207ENST00000555535 AP3S1Q92572 193 aa-0.23□□□□□ -2.45
SRP54-207ENST00000555535 DMAC1Q96GE9 116 aa-0.23□□□□□ -2.45
SRP54-207ENST00000555535 NUBP2Q9Y5Y2 271 aa-0.23□□□□□ -2.45
SRP54-207ENST00000555535 FAM208BQ5VWN6 2430 aa-0.23□□□□□ -2.45
SRP54-207ENST00000555535 SYNMO15061 1565 aa-0.23□□□□□ -2.45
SRP54-207ENST00000555535 A0A096LNT2 108 aa-0.24□□□□□ -2.45
SRP54-207ENST00000555535 MAP1LC3B2A6NCE7 125 aa-0.24□□□□□ -2.45
SRP54-207ENST00000555535 IFITM5A6NNB3 132 aa-0.24□□□□□ -2.45
SRP54-207ENST00000555535 S100A6P06703 90 aa-0.24□□□□□ -2.45
SRP54-207ENST00000555535 ADCYAP1P18509 176 aa-0.24□□□□□ -2.45
SRP54-207ENST00000555535 G0S2P27469 103 aa-0.24□□□□□ -2.45
SRP54-207ENST00000555535 SERPINB1P30740 379 aa-0.24□□□□□ -2.45
SRP54-207ENST00000555535 CKS2P33552 79 aa-0.24□□□□□ -2.45
SRP54-207ENST00000555535 PCBD1P61457 104 aa-0.24□□□□□ -2.45
SRP54-207ENST00000555535 KRTAP6-1Q3LI64 71 aa-0.24□□□□□ -2.45
SRP54-207ENST00000555535 C3orf33Q6P1S2 294 aa-0.24□□□□□ -2.45
SRP54-207ENST00000555535 DCUN1D2Q6PH85 259 aa-0.24□□□□□ -2.45
SRP54-207ENST00000555535 TMED4Q7Z7H5 227 aa-0.24□□□□□ -2.45
SRP54-207ENST00000555535 STX12Q86Y82 276 aa-0.24□□□□□ -2.45
SRP54-207ENST00000555535 OTOSQ8NHW6 89 aa-0.24□□□□□ -2.45
SRP54-207ENST00000555535 COA4Q9NYJ1 87 aa-0.24□□□□□ -2.45
SRP54-207ENST00000555535 LAMTOR3Q9UHA4 124 aa-0.24□□□□□ -2.45
SRP54-207ENST00000555535 BLMP54132 1417 aaPredicted RBP-0.24□□□□□ -2.45
SRP54-207ENST00000555535 MYH6P13533 1939 aa-0.25□□□□□ -2.45
SRP54-207ENST00000555535 PKDREJQ9NTG1 2253 aa-0.25□□□□□ -2.45
SRP54-207ENST00000555535 TRBV27A0A0K0K1C4 114 aa-0.25□□□□□ -2.45
SRP54-207ENST00000555535 C10orf142B7Z368 130 aa-0.25□□□□□ -2.45
SRP54-207ENST00000555535 H3BMG7 143 aa-0.25□□□□□ -2.45
SRP54-207ENST00000555535 APOC1P02654 83 aa-0.25□□□□□ -2.45
SRP54-207ENST00000555535 PYYP10082 97 aa-0.25□□□□□ -2.45
SRP54-207ENST00000555535 SDC4P31431 198 aa-0.25□□□□□ -2.45
SRP54-207ENST00000555535 DEFB132Q7Z7B7 95 aa-0.25□□□□□ -2.45
SRP54-207ENST00000555535 MORN4Q8NDC4 146 aa-0.25□□□□□ -2.45
SRP54-207ENST00000555535 MNS1Q8NEH6 495 aa-0.25□□□□□ -2.45
SRP54-207ENST00000555535 LXNQ9BS40 222 aa-0.25□□□□□ -2.45
SRP54-207ENST00000555535 LAMTOR2Q9Y2Q5 125 aa-0.25□□□□□ -2.45
SRP54-207ENST00000555535 NRXN2Q9P2S2 1712 aa-0.25□□□□□ -2.45
SRP54-207ENST00000555535 ZNF142P52746 1687 aaPredicted RBP-0.26□□□□□ -2.45
SRP54-207ENST00000555535 TRBV10-1A0A0K0K1A3 114 aa-0.26□□□□□ -2.45
SRP54-207ENST00000555535 LOC107984640A0A0U1RRK4 108 aa-0.26□□□□□ -2.45
SRP54-207ENST00000555535 TCRBV3S1A0A5B6 114 aa-0.26□□□□□ -2.45
SRP54-207ENST00000555535 HBDP02042 147 aa-0.26□□□□□ -2.45
SRP54-207ENST00000555535 TRIQKQ629K1 86 aa-0.26□□□□□ -2.45
SRP54-207ENST00000555535 CCDC32Q9BV29 185 aa-0.26□□□□□ -2.45
SRP54-207ENST00000555535 BPESC1Q9GZL8 116 aa-0.26□□□□□ -2.45
SRP54-207ENST00000555535 C19orf12Q9NSK7 152 aa-0.26□□□□□ -2.45
SRP54-207ENST00000555535 CBLN4Q9NTU7 201 aa-0.26□□□□□ -2.45
SRP54-207ENST00000555535 CDK5RAP2Q96SN8 1893 aa-0.27□□□□□ -2.45
SRP54-207ENST00000555535 SSC5DA1L4H1 1573 aa-0.27□□□□□ -2.45
SRP54-207ENST00000555535 YTHDC2Q9H6S0 1430 aaKnown RBP-0.27□□□□□ -2.45
SRP54-207ENST00000555535 APODP05090 189 aa-0.27□□□□□ -2.45
SRP54-207ENST00000555535 ELOF1P60002 83 aaKnown RBP-0.27□□□□□ -2.45
SRP54-207ENST00000555535 LSM3P62310 102 aaKnown RBP-0.27□□□□□ -2.45
SRP54-207ENST00000555535 MRPS15P82914 257 aaKnown RBP-0.27□□□□□ -2.45
SRP54-207ENST00000555535 CCSMST1Q4G0I0 132 aa-0.27□□□□□ -2.45
SRP54-207ENST00000555535 OR4S1Q8NGB4 309 aa-0.27□□□□□ -2.45
SRP54-207ENST00000555535 CDC26Q8NHZ8 85 aa-0.27□□□□□ -2.45
SRP54-207ENST00000555535 SMIM11BQ8TCY0 68 aa-0.27□□□□□ -2.45
SRP54-207ENST00000555535 BET1LQ9NYM9 111 aa-0.27□□□□□ -2.45
SRP54-207ENST00000555535 MED31Q9Y3C7 131 aa-0.27□□□□□ -2.45
SRP54-207ENST00000555535 MUC12Q9UKN1 5478 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms