RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 ZNF80P51504 273 aaPredicted RBP4.64□□□□□ -1.67
LINC00643-203ENST00000555518 PSMG4Q5JS54 123 aa4.64□□□□□ -1.67
LINC00643-203ENST00000555518 PRR9Q5T870 116 aa4.64□□□□□ -1.67
LINC00643-203ENST00000555518 FAM231DQ6ZW35 169 aa4.64□□□□□ -1.67
LINC00643-203ENST00000555518 APRG1Q8IVJ8 170 aa4.64□□□□□ -1.67
LINC00643-203ENST00000555518 ZNF738Q8NE65 137 aa4.64□□□□□ -1.67
LINC00643-203ENST00000555518 WFDC9Q8NEX5 89 aa4.64□□□□□ -1.67
LINC00643-203ENST00000555518 OR2K2Q8NGT1 345 aa4.64□□□□□ -1.67
LINC00643-203ENST00000555518 SFRP2Q96HF1 295 aa4.64□□□□□ -1.67
LINC00643-203ENST00000555518 RPS10P5Q9NQ39 176 aa4.64□□□□□ -1.67
LINC00643-203ENST00000555518 ZNF492Q9P255 531 aa4.64□□□□□ -1.67
LINC00643-203ENST00000555518 ZFP30Q9Y2G7 519 aa4.64□□□□□ -1.67
LINC00643-203ENST00000555518 V9GYV3 84 aa4.64□□□□□ -1.67
LINC00643-203ENST00000555518 RBMY1BA6NDE4 496 aaKnown RBP4.63□□□□□ -1.67
LINC00643-203ENST00000555518 CXorf65A6NEN9 183 aa4.63□□□□□ -1.67
LINC00643-203ENST00000555518 RBMY1EA6NEQ0 496 aaKnown RBP4.63□□□□□ -1.67
LINC00643-203ENST00000555518 FBLL1A6NHQ2 334 aaKnown RBP4.63□□□□□ -1.67
LINC00643-203ENST00000555518 K7EQM0 130 aa4.63□□□□□ -1.67
LINC00643-203ENST00000555518 PFN1P07737 140 aaKnown RBP4.63□□□□□ -1.67
LINC00643-203ENST00000555518 RBMY1DP0C7P1 496 aaKnown RBP4.63□□□□□ -1.67
LINC00643-203ENST00000555518 CRISP2P16562 243 aa4.63□□□□□ -1.67
LINC00643-203ENST00000555518 BTN1A1Q13410 526 aa4.63□□□□□ -1.67
LINC00643-203ENST00000555518 AMTNQ6UX39 209 aa4.63□□□□□ -1.67
LINC00643-203ENST00000555518 FOXI2Q6ZQN5 318 aa4.63□□□□□ -1.67
LINC00643-203ENST00000555518 RBPMS2Q6ZRY4 209 aaKnown RBP4.63□□□□□ -1.67
LINC00643-203ENST00000555518 ZFAND2AQ8N6M9 145 aa4.63□□□□□ -1.67
LINC00643-203ENST00000555518 RNASE7Q9H1E1 156 aaKnown RBP4.63□□□□□ -1.67
LINC00643-203ENST00000555518 SAV1Q9H4B6 383 aaPredicted RBP4.63□□□□□ -1.67
LINC00643-203ENST00000555518 MAP6D1Q9H9H5 199 aa4.63□□□□□ -1.67
LINC00643-203ENST00000555518 OSTCQ9NRP0 149 aa4.63□□□□□ -1.67
LINC00643-203ENST00000555518 TMEM242Q9NWH2 141 aa4.63□□□□□ -1.67
LINC00643-203ENST00000555518 TRBV7-9A0A0J9YWB2 115 aa4.62□□□□□ -1.67
LINC00643-203ENST00000555518 OR4C46A6NHA9 309 aa4.62□□□□□ -1.67
LINC00643-203ENST00000555518 KNCNA6PVL3 124 aa4.62□□□□□ -1.67
LINC00643-203ENST00000555518 KLLNB2CW77 178 aa4.62□□□□□ -1.67
LINC00643-203ENST00000555518 MGST1P10620 155 aaKnown RBP4.62□□□□□ -1.67
LINC00643-203ENST00000555518 ZNF138P52744 262 aa4.62□□□□□ -1.67
LINC00643-203ENST00000555518 DEFB131AP59861 70 aa4.62□□□□□ -1.67
LINC00643-203ENST00000555518 SNRPD3P62318 126 aaKnown RBP4.62□□□□□ -1.67
LINC00643-203ENST00000555518 PAFAH1B2P68402 229 aa4.62□□□□□ -1.67
LINC00643-203ENST00000555518 HIST1H1AQ02539 215 aaPredicted RBP4.62□□□□□ -1.67
LINC00643-203ENST00000555518 SAPCD1Q5SSQ6 148 aa4.62□□□□□ -1.67
LINC00643-203ENST00000555518 Q6ZQT7 251 aa4.62□□□□□ -1.67
LINC00643-203ENST00000555518 OR10G8Q8NGN5 311 aa4.62□□□□□ -1.67
LINC00643-203ENST00000555518 TMEM158Q8WZ71 300 aa4.62□□□□□ -1.67
LINC00643-203ENST00000555518 LINC00477Q96M19 166 aa4.62□□□□□ -1.67
LINC00643-203ENST00000555518 ODF3Q96PU9 254 aa4.62□□□□□ -1.67
LINC00643-203ENST00000555518 TUBA4BQ9H853 241 aa4.62□□□□□ -1.67
LINC00643-203ENST00000555518 LENEPQ9Y5L5 61 aa4.62□□□□□ -1.67
LINC00643-203ENST00000555518 DNHD1Q96M86 4753 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 COLCA2A8K830 154 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 H3BMM0 161 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 H7BYZ3 331 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 SH2D1AO60880 128 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 CA1P00915 261 aaPredicted RBP4.61□□□□□ -1.67
LINC00643-203ENST00000555518 MT-ND4LP03901 98 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 CD7P09564 240 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 HLA-DRB4P13762 266 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 INSL3P51460 131 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 ERVFC1-1P60608 527 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 IBA57Q5T440 356 aaKnown RBP4.61□□□□□ -1.67
LINC00643-203ENST00000555518 TMEM78Q5T7P6 136 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 C9orf66Q5T8R8 295 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 PRR27Q6MZM9 219 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 C12orf54Q6X4T0 127 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 LURAP1LQ8IV03 231 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 C3orf56Q8N813 242 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 OR10J6PQ8NGY7 276 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 FAM110AQ9BQ89 295 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 PYGO2Q9BRQ0 406 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 WFDC10AQ9H1F0 79 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 SMCO4Q9NRQ5 59 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 HLA-DRB4X5D2U9 266 aa4.61□□□□□ -1.67
LINC00643-203ENST00000555518 SMIM27A0A1W2PRY6 76 aa4.6□□□□□ -1.67
LINC00643-203ENST00000555518 GAGE10A6NGK3 116 aa4.6□□□□□ -1.67
LINC00643-203ENST00000555518 PPP1R2P9O14990 202 aa4.6□□□□□ -1.67
LINC00643-203ENST00000555518 CRXO43186 299 aaPredicted RBP4.6□□□□□ -1.67
LINC00643-203ENST00000555518 GATCO43716 136 aaKnown RBP4.6□□□□□ -1.67
LINC00643-203ENST00000555518 CXCL1P09341 107 aa4.6□□□□□ -1.67
LINC00643-203ENST00000555518 IGLL1P15814 213 aa4.6□□□□□ -1.67
LINC00643-203ENST00000555518 RPL19P84098 196 aaKnown RBP4.6□□□□□ -1.67
LINC00643-203ENST00000555518 ELOBQ15370 118 aa4.6□□□□□ -1.67
LINC00643-203ENST00000555518 SMUG1Q53HV7 270 aa4.6□□□□□ -1.67
LINC00643-203ENST00000555518 FAM162BQ5T6X4 162 aa4.6□□□□□ -1.67
LINC00643-203ENST00000555518 Q6AWC8 147 aa4.6□□□□□ -1.67
LINC00643-203ENST00000555518 TRPT1Q86TN4 253 aaKnown RBP4.6□□□□□ -1.67
LINC00643-203ENST00000555518 C15orf54Q8N8G6 183 aa4.6□□□□□ -1.67
LINC00643-203ENST00000555518 OR4B1Q8NGF8 309 aa4.6□□□□□ -1.67
LINC00643-203ENST00000555518 GTSF1Q8WW33 167 aa4.6□□□□□ -1.67
LINC00643-203ENST00000555518 IMMP2LQ96T52 175 aa4.6□□□□□ -1.67
LINC00643-203ENST00000555518 RPP21Q9H633 154 aaKnown RBP4.6□□□□□ -1.67
LINC00643-203ENST00000555518 BIN3Q9NQY0 253 aa4.6□□□□□ -1.67
LINC00643-203ENST00000555518 IL36BQ9NZH7 164 aa4.6□□□□□ -1.67
LINC00643-203ENST00000555518 TRBV24-1A0A075B6N3 115 aa4.59□□□□□ -1.67
LINC00643-203ENST00000555518 A0A0A0MQY5 61 aa4.59□□□□□ -1.67
LINC00643-203ENST00000555518 TGIF2-C20orf24A0A0A6YYL0 155 aa4.59□□□□□ -1.67
LINC00643-203ENST00000555518 IGKV3D-20A0A0C4DH25 116 aa4.59□□□□□ -1.67
LINC00643-203ENST00000555518 ZNF705GA8MUZ8 300 aaPredicted RBP4.59□□□□□ -1.67
LINC00643-203ENST00000555518 M0R2Z0 102 aa4.59□□□□□ -1.67
LINC00643-203ENST00000555518 ZNF324O75467 553 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms