RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 KANTRA0A1W2PQU2 76 aa9.5□□□□□ -0.89
SNX6-203ENST00000555416 IFNA7P01567 189 aa9.5□□□□□ -0.89
SNX6-203ENST00000555416 TYMSP04818 313 aa9.5□□□□□ -0.89
SNX6-203ENST00000555416 LGALSLQ3ZCW2 172 aaPredicted RBP9.5□□□□□ -0.89
SNX6-203ENST00000555416 TCTE3Q8IZS6 198 aa9.5□□□□□ -0.89
SNX6-203ENST00000555416 LINC00588Q9Y4M8 146 aa9.5□□□□□ -0.89
SNX6-203ENST00000555416 hCG_2014768A0A024R1R8 64 aa9.49□□□□□ -0.89
SNX6-203ENST00000555416 TRGV11A0A075B6L2 103 aa9.49□□□□□ -0.89
SNX6-203ENST00000555416 PEX7O00628 323 aa9.49□□□□□ -0.89
SNX6-203ENST00000555416 GCGP01275 180 aa9.49□□□□□ -0.89
SNX6-203ENST00000555416 SFTA3P0C7M3 94 aa9.49□□□□□ -0.89
SNX6-203ENST00000555416 LGALS9BQ3B8N2 356 aa9.49□□□□□ -0.89
SNX6-203ENST00000555416 Q6ZR54 194 aa9.49□□□□□ -0.89
SNX6-203ENST00000555416 MBD3L1Q8WWY6 194 aa9.49□□□□□ -0.89
SNX6-203ENST00000555416 NDFIP1Q9BT67 221 aa9.49□□□□□ -0.89
SNX6-203ENST00000555416 K7EQM0 130 aa9.48□□□□□ -0.89
SNX6-203ENST00000555416 PFDN1O60925 122 aa9.48□□□□□ -0.89
SNX6-203ENST00000555416 FHL2Q14192 279 aa9.48□□□□□ -0.89
SNX6-203ENST00000555416 Q86TA4 180 aa9.48□□□□□ -0.89
SNX6-203ENST00000555416 ZNRF2Q8NHG8 242 aa9.48□□□□□ -0.89
SNX6-203ENST00000555416 SFT2D1Q8WV19 159 aa9.48□□□□□ -0.89
SNX6-203ENST00000555416 ZNF479Q96JC4 524 aa9.48□□□□□ -0.89
SNX6-203ENST00000555416 ARL2-SNX15V9GYD0 113 aa9.48□□□□□ -0.89
SNX6-203ENST00000555416 A0A096LPF7 62 aa9.47□□□□□ -0.89
SNX6-203ENST00000555416 RTL8CO15255 209 aa9.47□□□□□ -0.89
SNX6-203ENST00000555416 PAGE4O60829 102 aa9.47□□□□□ -0.89
SNX6-203ENST00000555416 PFN1P07737 140 aaKnown RBP9.47□□□□□ -0.89
SNX6-203ENST00000555416 ESRGQ1W209 222 aa9.47□□□□□ -0.89
SNX6-203ENST00000555416 SMUG1Q53HV7 270 aa9.47□□□□□ -0.89
SNX6-203ENST00000555416 CST9LP1Q5W188 147 aa9.47□□□□□ -0.89
SNX6-203ENST00000555416 STOML3Q8TAV4 291 aa9.47□□□□□ -0.89
SNX6-203ENST00000555416 RASL10AQ92737 203 aa9.47□□□□□ -0.89
SNX6-203ENST00000555416 SPXQ9BT56 116 aa9.47□□□□□ -0.89
SNX6-203ENST00000555416 SDF2L1Q9HCN8 221 aa9.47□□□□□ -0.89
SNX6-203ENST00000555416 UMAD1C9J7I0 102 aa9.46□□□□□ -0.9
SNX6-203ENST00000555416 H3BNG1 76 aa9.46□□□□□ -0.9
SNX6-203ENST00000555416 TPT1P13693 172 aaKnown RBP9.46□□□□□ -0.9
SNX6-203ENST00000555416 CRIP1P50238 77 aa9.46□□□□□ -0.9
SNX6-203ENST00000555416 CCL20P78556 96 aa9.46□□□□□ -0.9
SNX6-203ENST00000555416 IGKV3D-20A0A0C4DH25 116 aa9.45□□□□□ -0.9
SNX6-203ENST00000555416 M0R2P5 195 aa9.45□□□□□ -0.9
SNX6-203ENST00000555416 LCE2BO14633 110 aa9.45□□□□□ -0.9
SNX6-203ENST00000555416 C1QBP02746 253 aa9.45□□□□□ -0.9
SNX6-203ENST00000555416 CRYBA4P53673 196 aa9.45□□□□□ -0.9
SNX6-203ENST00000555416 SAPCD1Q5SSQ6 148 aa9.45□□□□□ -0.9
SNX6-203ENST00000555416 HIST1H2BAQ96A08 127 aa9.45□□□□□ -0.9
SNX6-203ENST00000555416 ZC2HC1AQ96GY0 325 aa9.45□□□□□ -0.9
SNX6-203ENST00000555416 KCNS1Q96KK3 526 aa9.45□□□□□ -0.9
SNX6-203ENST00000555416 NKX6-2Q9C056 277 aaPredicted RBP9.45□□□□□ -0.9
SNX6-203ENST00000555416 DNAH2Q9P225 4427 aa9.45□□□□□ -0.9
SNX6-203ENST00000555416 A0A1B0GVG6 124 aa9.44□□□□□ -0.9
SNX6-203ENST00000555416 FBLL1A6NHQ2 334 aaKnown RBP9.44□□□□□ -0.9
SNX6-203ENST00000555416 PAX4O43316 350 aa9.44□□□□□ -0.9
SNX6-203ENST00000555416 H2AFB1P0C5Y9 115 aa9.44□□□□□ -0.9
SNX6-203ENST00000555416 RNASE3P12724 160 aaKnown RBP9.44□□□□□ -0.9
SNX6-203ENST00000555416 CCL18P55774 89 aa9.44□□□□□ -0.9
SNX6-203ENST00000555416 FAM3BP58499 235 aaPredicted RBP9.44□□□□□ -0.9
SNX6-203ENST00000555416 EIF5AP63241 154 aaKnown RBP9.44□□□□□ -0.9
SNX6-203ENST00000555416 DPPA3Q6W0C5 159 aa9.44□□□□□ -0.9
SNX6-203ENST00000555416 ZNF575Q86XF7 245 aa9.44□□□□□ -0.9
SNX6-203ENST00000555416 C9orf85Q96MD7 179 aa9.44□□□□□ -0.9
SNX6-203ENST00000555416 SCO2A0A1W2PP80 73 aa9.43□□□□□ -0.9
SNX6-203ENST00000555416 PPT1P50897 306 aa9.43□□□□□ -0.9
SNX6-203ENST00000555416 ZFP69Q49AA0 526 aa9.43□□□□□ -0.9
SNX6-203ENST00000555416 KRTAP1-5Q9BYS1 174 aa9.43□□□□□ -0.9
SNX6-203ENST00000555416 PRO0255Q9UI72 69 aa9.43□□□□□ -0.9
SNX6-203ENST00000555416 HHLA3Q9XRX5 114 aa9.43□□□□□ -0.9
SNX6-203ENST00000555416 HECTD4Q9Y4D8 3996 aa9.42□□□□□ -0.9
SNX6-203ENST00000555416 FAT2Q9NYQ8 4349 aa9.42□□□□□ -0.9
SNX6-203ENST00000555416 TRAV4A0A0B4J268 109 aa9.42□□□□□ -0.9
SNX6-203ENST00000555416 TRGV4A0A0C4DH28 118 aa9.42□□□□□ -0.9
SNX6-203ENST00000555416 PGPEP1LA6NFU8 196 aa9.42□□□□□ -0.9
SNX6-203ENST00000555416 C9JCJ5 164 aa9.42□□□□□ -0.9
SNX6-203ENST00000555416 COX8CQ7Z4L0 72 aa9.42□□□□□ -0.9
SNX6-203ENST00000555416 AKAP14Q86UN6 197 aa9.42□□□□□ -0.9
SNX6-203ENST00000555416 C9orf62Q8N4C0 152 aa9.42□□□□□ -0.9
SNX6-203ENST00000555416 NHLRC2Q8NBF2 726 aa9.42□□□□□ -0.9
SNX6-203ENST00000555416 FMC1Q96HJ9 113 aa9.42□□□□□ -0.9
SNX6-203ENST00000555416 DNAH17Q9UFH2 4485 aa9.41□□□□□ -0.9
SNX6-203ENST00000555416 TRBV6-1A0A0K0K1D8 114 aa9.41□□□□□ -0.9
SNX6-203ENST00000555416 LOC100131303A0A0U1RQF7 123 aa9.41□□□□□ -0.9
SNX6-203ENST00000555416 NBDYA0A0U1RRE5 68 aa9.41□□□□□ -0.9
SNX6-203ENST00000555416 A0A1B0GVY2 172 aa9.41□□□□□ -0.9
SNX6-203ENST00000555416 FABP5P3A8MUU1 101 aa9.41□□□□□ -0.9
SNX6-203ENST00000555416 SH2D1AO60880 128 aa9.41□□□□□ -0.9
SNX6-203ENST00000555416 LTAP01374 205 aa9.41□□□□□ -0.9
SNX6-203ENST00000555416 AKR1C3P42330 323 aa9.41□□□□□ -0.9
SNX6-203ENST00000555416 ZNF876PQ49A33 203 aa9.41□□□□□ -0.9
SNX6-203ENST00000555416 OR4C5Q8NGB2 326 aa9.41□□□□□ -0.9
SNX6-203ENST00000555416 Q9H8V8 135 aa9.41□□□□□ -0.9
SNX6-203ENST00000555416 ZFP30Q9Y2G7 519 aa9.41□□□□□ -0.9
SNX6-203ENST00000555416 MRPS16Q9Y3D3 137 aaKnown RBP9.41□□□□□ -0.9
SNX6-203ENST00000555416 TRAV1-1A0A0B4J248 108 aa9.4□□□□□ -0.9
SNX6-203ENST00000555416 M0R036 132 aa9.4□□□□□ -0.9
SNX6-203ENST00000555416 SULT1A2P50226 295 aa9.4□□□□□ -0.9
SNX6-203ENST00000555416 UBE2G1P62253 170 aa9.4□□□□□ -0.9
SNX6-203ENST00000555416 ZNF506Q5JVG8 444 aa9.4□□□□□ -0.9
SNX6-203ENST00000555416 TCEAL7Q9BRU2 100 aa9.4□□□□□ -0.9
SNX6-203ENST00000555416 GNG13Q9P2W3 67 aa9.4□□□□□ -0.9
SNX6-203ENST00000555416 ICOSQ9Y6W8 199 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms