RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 GNRH2O43555 120 aa7.35□□□□□ -1.23
SYNE2-215ENST00000554997 ORM1P02763 201 aa7.35□□□□□ -1.23
SYNE2-215ENST00000554997 NDUFA5Q16718 116 aa7.35□□□□□ -1.23
SYNE2-215ENST00000554997 MUC21Q5SSG8 566 aa7.35□□□□□ -1.23
SYNE2-215ENST00000554997 PRR27Q6MZM9 219 aa7.35□□□□□ -1.23
SYNE2-215ENST00000554997 ZNF575Q86XF7 245 aa7.35□□□□□ -1.23
SYNE2-215ENST00000554997 SDF2L1Q9HCN8 221 aa7.35□□□□□ -1.23
SYNE2-215ENST00000554997 TP53TG3Q9ULZ0 132 aa7.35□□□□□ -1.23
SYNE2-215ENST00000554997 DNAH9Q9NYC9 4486 aa7.34□□□□□ -1.23
SYNE2-215ENST00000554997 NBEAL2Q6ZNJ1 2754 aa7.34□□□□□ -1.23
SYNE2-215ENST00000554997 IGHV4-28A0A0C4DH34 117 aa7.34□□□□□ -1.23
SYNE2-215ENST00000554997 TMEM189A5PLL7 270 aa7.34□□□□□ -1.23
SYNE2-215ENST00000554997 KRBOX1C9JBD0 128 aa7.34□□□□□ -1.23
SYNE2-215ENST00000554997 RPL23P62829 140 aaKnown RBP7.34□□□□□ -1.23
SYNE2-215ENST00000554997 OR5I1Q13606 314 aa7.34□□□□□ -1.23
SYNE2-215ENST00000554997 LINC01559Q495D7 138 aa7.34□□□□□ -1.23
SYNE2-215ENST00000554997 FAM231DQ6ZW35 169 aa7.34□□□□□ -1.23
SYNE2-215ENST00000554997 Q8NAQ8 132 aa7.34□□□□□ -1.23
SYNE2-215ENST00000554997 NUDT10Q8NFP7 164 aa7.34□□□□□ -1.23
SYNE2-215ENST00000554997 NUDT11Q96G61 164 aa7.34□□□□□ -1.23
SYNE2-215ENST00000554997 SEC11CQ9BY50 192 aa7.34□□□□□ -1.23
SYNE2-215ENST00000554997 TRGV11A0A075B6L2 103 aa7.33□□□□□ -1.24
SYNE2-215ENST00000554997 B4DEV8 164 aa7.33□□□□□ -1.24
SYNE2-215ENST00000554997 F8W036 122 aa7.33□□□□□ -1.24
SYNE2-215ENST00000554997 DNLZQ5SXM8 178 aa7.33□□□□□ -1.24
SYNE2-215ENST00000554997 C10orf91Q5T1B1 145 aa7.33□□□□□ -1.24
SYNE2-215ENST00000554997 IBA57Q5T440 356 aaKnown RBP7.33□□□□□ -1.24
SYNE2-215ENST00000554997 C11orf72Q8NBR9 251 aa7.33□□□□□ -1.24
SYNE2-215ENST00000554997 RNASE8Q8TDE3 154 aaKnown RBP7.33□□□□□ -1.24
SYNE2-215ENST00000554997 TMEM263Q8WUH6 116 aaKnown RBP7.33□□□□□ -1.24
SYNE2-215ENST00000554997 C16orf74Q96GX8 76 aa7.33□□□□□ -1.24
SYNE2-215ENST00000554997 RNASE7Q9H1E1 156 aaKnown RBP7.33□□□□□ -1.24
SYNE2-215ENST00000554997 MDFICQ9P1T7 246 aa7.33□□□□□ -1.24
SYNE2-215ENST00000554997 NAGKQ9UJ70 344 aa7.33□□□□□ -1.24
SYNE2-215ENST00000554997 IGHV3-16A0A0C4DH30 117 aa7.32□□□□□ -1.24
SYNE2-215ENST00000554997 PLAC8L1A1L4L8 177 aa7.32□□□□□ -1.24
SYNE2-215ENST00000554997 P01737 135 aa7.32□□□□□ -1.24
SYNE2-215ENST00000554997 TYMSP04818 313 aa7.32□□□□□ -1.24
SYNE2-215ENST00000554997 ERVFC1-1P60608 527 aa7.32□□□□□ -1.24
SYNE2-215ENST00000554997 PNRC1Q12796 327 aaPredicted RBP7.32□□□□□ -1.24
SYNE2-215ENST00000554997 DAZ2Q13117 558 aaKnown RBP7.32□□□□□ -1.24
SYNE2-215ENST00000554997 SLC7A5P1Q8MH63 180 aa7.32□□□□□ -1.24
SYNE2-215ENST00000554997 ISOC2Q96AB3 205 aa7.32□□□□□ -1.24
SYNE2-215ENST00000554997 C11orf68Q9H3H3 251 aaKnown RBP7.32□□□□□ -1.24
SYNE2-215ENST00000554997 GSN-AS1Q9NRJ2 163 aa7.32□□□□□ -1.24
SYNE2-215ENST00000554997 OSTCQ9NRP0 149 aa7.32□□□□□ -1.24
SYNE2-215ENST00000554997 TIMM8BQ9Y5J9 83 aaPredicted RBP7.32□□□□□ -1.24
SYNE2-215ENST00000554997 U3KQK5 164 aa7.32□□□□□ -1.24
SYNE2-215ENST00000554997 M0R036 132 aa7.31□□□□□ -1.24
SYNE2-215ENST00000554997 DEFB4AO15263 64 aa7.31□□□□□ -1.24
SYNE2-215ENST00000554997 CXCL1P09341 107 aa7.31□□□□□ -1.24
SYNE2-215ENST00000554997 ADCYAP1P18509 176 aa7.31□□□□□ -1.24
SYNE2-215ENST00000554997 RPS20P60866 119 aaKnown RBP7.31□□□□□ -1.24
SYNE2-215ENST00000554997 ADIRFQ15847 76 aa7.31□□□□□ -1.24
SYNE2-215ENST00000554997 OR2D3Q8NGH3 330 aa7.31□□□□□ -1.24
SYNE2-215ENST00000554997 SPXQ9BT56 116 aa7.31□□□□□ -1.24
SYNE2-215ENST00000554997 TMSB15BA0A087X1C1 80 aa7.3□□□□□ -1.24
SYNE2-215ENST00000554997 A0A0J9YWU9 116 aa7.3□□□□□ -1.24
SYNE2-215ENST00000554997 XKRY2A2RUG3 117 aa7.3□□□□□ -1.24
SYNE2-215ENST00000554997 GRIFINA4D1Z8 144 aa7.3□□□□□ -1.24
SYNE2-215ENST00000554997 LYRM9A8MSI8 78 aa7.3□□□□□ -1.24
SYNE2-215ENST00000554997 SNURFLB1AK76 121 aa7.3□□□□□ -1.24
SYNE2-215ENST00000554997 GATCO43716 136 aaKnown RBP7.3□□□□□ -1.24
SYNE2-215ENST00000554997 SPART-AS1P0CW21 52 aa7.3□□□□□ -1.24
SYNE2-215ENST00000554997 S100A4P26447 101 aaKnown RBP7.3□□□□□ -1.24
SYNE2-215ENST00000554997 ASIPP42127 132 aa7.3□□□□□ -1.24
SYNE2-215ENST00000554997 EMP1P54849 157 aa7.3□□□□□ -1.24
SYNE2-215ENST00000554997 TCL1AP56279 114 aa7.3□□□□□ -1.24
SYNE2-215ENST00000554997 RPL19P84098 196 aaKnown RBP7.3□□□□□ -1.24
SYNE2-215ENST00000554997 C15orf54Q8N8G6 183 aa7.3□□□□□ -1.24
SYNE2-215ENST00000554997 OR10G8Q8NGN5 311 aa7.3□□□□□ -1.24
SYNE2-215ENST00000554997 IL17DQ8TAD2 202 aa7.3□□□□□ -1.24
SYNE2-215ENST00000554997 SFRP2Q96HF1 295 aa7.3□□□□□ -1.24
SYNE2-215ENST00000554997 RPP21Q9H633 154 aaKnown RBP7.3□□□□□ -1.24
SYNE2-215ENST00000554997 NOP10Q9NPE3 64 aaKnown RBP7.3□□□□□ -1.24
SYNE2-215ENST00000554997 CARHSP1Q9Y2V2 147 aaKnown RBP7.3□□□□□ -1.24
SYNE2-215ENST00000554997 COL7A1Q02388 2944 aa7.3□□□□□ -1.24
SYNE2-215ENST00000554997 A8MWL6 223 aa7.29□□□□□ -1.24
SYNE2-215ENST00000554997 SPINK4O60575 86 aa7.29□□□□□ -1.24
SYNE2-215ENST00000554997 ARMS2P0C7Q2 107 aa7.29□□□□□ -1.24
SYNE2-215ENST00000554997 RNASE3P12724 160 aaKnown RBP7.29□□□□□ -1.24
SYNE2-215ENST00000554997 FOXA3P55318 350 aaPredicted RBP7.29□□□□□ -1.24
SYNE2-215ENST00000554997 ZNF415Q09FC8 603 aa7.29□□□□□ -1.24
SYNE2-215ENST00000554997 LGALS9BQ3B8N2 356 aa7.29□□□□□ -1.24
SYNE2-215ENST00000554997 CT83Q5H943 113 aa7.29□□□□□ -1.24
SYNE2-215ENST00000554997 PTH2Q96A98 100 aa7.29□□□□□ -1.24
SYNE2-215ENST00000554997 C9orf85Q96MD7 179 aa7.29□□□□□ -1.24
SYNE2-215ENST00000554997 SSBP4Q9BWG4 385 aaPredicted RBP7.29□□□□□ -1.24
SYNE2-215ENST00000554997 EDA2RQ9HAV5 297 aa7.29□□□□□ -1.24
SYNE2-215ENST00000554997 SCRT2Q9NQ03 307 aa7.29□□□□□ -1.24
SYNE2-215ENST00000554997 IL36BQ9NZH7 164 aa7.29□□□□□ -1.24
SYNE2-215ENST00000554997 DKK2Q9UBU2 259 aa7.29□□□□□ -1.24
SYNE2-215ENST00000554997 TEX48A0A1B0GUV7 120 aa7.28□□□□□ -1.24
SYNE2-215ENST00000554997 A0A1W2PPQ1 181 aa7.28□□□□□ -1.24
SYNE2-215ENST00000554997 FAM231BA6NCW3 169 aa7.28□□□□□ -1.24
SYNE2-215ENST00000554997 CXorf65A6NEN9 183 aa7.28□□□□□ -1.24
SYNE2-215ENST00000554997 F2Z2F3 143 aa7.28□□□□□ -1.24
SYNE2-215ENST00000554997 M0R2P5 195 aa7.28□□□□□ -1.24
SYNE2-215ENST00000554997 PPP1R2P9O14990 202 aa7.28□□□□□ -1.24
SYNE2-215ENST00000554997 MT-ND4LP03901 98 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms