RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 DNAH2Q9P225 4427 aa7.57□□□□□ -1.2
SHMT2-215ENST00000554656 TRBV7-9A0A0J9YWB2 115 aa7.57□□□□□ -1.2
SHMT2-215ENST00000554656 A0A1B0GVY2 172 aa7.57□□□□□ -1.2
SHMT2-215ENST00000554656 COLCA2A8K830 154 aa7.57□□□□□ -1.2
SHMT2-215ENST00000554656 AMBPP02760 352 aa7.57□□□□□ -1.2
SHMT2-215ENST00000554656 PFN1P07737 140 aaKnown RBP7.57□□□□□ -1.2
SHMT2-215ENST00000554656 MGST1P10620 155 aaKnown RBP7.57□□□□□ -1.2
SHMT2-215ENST00000554656 ERVFC1-1P60608 527 aa7.57□□□□□ -1.2
SHMT2-215ENST00000554656 ELOBQ15370 118 aa7.57□□□□□ -1.2
SHMT2-215ENST00000554656 IBA57Q5T440 356 aaKnown RBP7.57□□□□□ -1.2
SHMT2-215ENST00000554656 GDF5OSQ5U4N7 250 aa7.57□□□□□ -1.2
SHMT2-215ENST00000554656 PRNTQ86SH4 94 aa7.57□□□□□ -1.2
SHMT2-215ENST00000554656 OR4B1Q8NGF8 309 aa7.57□□□□□ -1.2
SHMT2-215ENST00000554656 PYGO2Q9BRQ0 406 aa7.57□□□□□ -1.2
SHMT2-215ENST00000554656 NACAE9PAV3 2078 aa7.56□□□□□ -1.2
SHMT2-215ENST00000554656 DEFB131BA0A096LNP1 70 aa7.56□□□□□ -1.2
SHMT2-215ENST00000554656 TRAV8-1A0A0A6YYK1 113 aa7.56□□□□□ -1.2
SHMT2-215ENST00000554656 C19orf71A6NCJ1 209 aa7.56□□□□□ -1.2
SHMT2-215ENST00000554656 GATCO43716 136 aaKnown RBP7.56□□□□□ -1.2
SHMT2-215ENST00000554656 CT45A10P0DMU9 189 aa7.56□□□□□ -1.2
SHMT2-215ENST00000554656 HLA-DRB4P13762 266 aa7.56□□□□□ -1.2
SHMT2-215ENST00000554656 RPL19P84098 196 aaKnown RBP7.56□□□□□ -1.2
SHMT2-215ENST00000554656 OR5I1Q13606 314 aa7.56□□□□□ -1.2
SHMT2-215ENST00000554656 TMEM78Q5T7P6 136 aa7.56□□□□□ -1.2
SHMT2-215ENST00000554656 LINC00477Q96M19 166 aa7.56□□□□□ -1.2
SHMT2-215ENST00000554656 IL36BQ9NZH7 164 aa7.56□□□□□ -1.2
SHMT2-215ENST00000554656 V9GYV3 84 aa7.56□□□□□ -1.2
SHMT2-215ENST00000554656 HLA-DRB4X5D2U9 266 aa7.56□□□□□ -1.2
SHMT2-215ENST00000554656 PCLOQ9Y6V0 5065 aa7.56□□□□□ -1.2
SHMT2-215ENST00000554656 DNAH17Q9UFH2 4485 aa7.56□□□□□ -1.2
SHMT2-215ENST00000554656 IGKV2-40A0A087WW87 121 aaPredicted RBP7.55□□□□□ -1.2
SHMT2-215ENST00000554656 FAM231BA6NCW3 169 aa7.55□□□□□ -1.2
SHMT2-215ENST00000554656 ZNF705FA8MVS1 300 aaPredicted RBP7.55□□□□□ -1.2
SHMT2-215ENST00000554656 NPIPB6E9PJ23 425 aa7.55□□□□□ -1.2
SHMT2-215ENST00000554656 IGKV2D-40P01614 121 aaPredicted RBP7.55□□□□□ -1.2
SHMT2-215ENST00000554656 ZNF705DP0CH99 300 aaPredicted RBP7.55□□□□□ -1.2
SHMT2-215ENST00000554656 ZNF705BP0CI00 300 aaPredicted RBP7.55□□□□□ -1.2
SHMT2-215ENST00000554656 ZNF138P52744 262 aa7.55□□□□□ -1.2
SHMT2-215ENST00000554656 SNRPD3P62318 126 aaKnown RBP7.55□□□□□ -1.2
SHMT2-215ENST00000554656 ZNF705AQ6ZN79 300 aaPredicted RBP7.55□□□□□ -1.2
SHMT2-215ENST00000554656 RNF182Q8N6D2 247 aa7.55□□□□□ -1.2
SHMT2-215ENST00000554656 ZNF738Q8NE65 137 aa7.55□□□□□ -1.2
SHMT2-215ENST00000554656 DAZAP1Q96EP5 407 aaKnown RBP7.55□□□□□ -1.2
SHMT2-215ENST00000554656 A8MWL6 223 aa7.54□□□□□ -1.2
SHMT2-215ENST00000554656 RTL8CO15255 209 aa7.54□□□□□ -1.2
SHMT2-215ENST00000554656 TYMSP04818 313 aa7.54□□□□□ -1.2
SHMT2-215ENST00000554656 FXYD7P58549 80 aa7.54□□□□□ -1.2
SHMT2-215ENST00000554656 SMUG1Q53HV7 270 aa7.54□□□□□ -1.2
SHMT2-215ENST00000554656 IGFL4Q6B9Z1 124 aa7.54□□□□□ -1.2
SHMT2-215ENST00000554656 NHLRC2Q8NBF2 726 aa7.54□□□□□ -1.2
SHMT2-215ENST00000554656 NUDT10Q8NFP7 164 aa7.54□□□□□ -1.2
SHMT2-215ENST00000554656 OR10J6PQ8NGY7 276 aa7.54□□□□□ -1.2
SHMT2-215ENST00000554656 NUDT11Q96G61 164 aa7.54□□□□□ -1.2
SHMT2-215ENST00000554656 ZC2HC1AQ96GY0 325 aa7.54□□□□□ -1.2
SHMT2-215ENST00000554656 C20orf173Q96LM9 149 aa7.54□□□□□ -1.2
SHMT2-215ENST00000554656 SGK494Q96LW2 274 aa7.54□□□□□ -1.2
SHMT2-215ENST00000554656 ODF3Q96PU9 254 aa7.54□□□□□ -1.2
SHMT2-215ENST00000554656 VGLL1Q99990 258 aa7.54□□□□□ -1.2
SHMT2-215ENST00000554656 MUC4Q99102 2169 aa7.53□□□□□ -1.2
SHMT2-215ENST00000554656 SMIM27A0A1W2PRY6 76 aa7.53□□□□□ -1.2
SHMT2-215ENST00000554656 ZNF705GA8MUZ8 300 aaPredicted RBP7.53□□□□□ -1.2
SHMT2-215ENST00000554656 PRAC2D3DTV9 90 aa7.53□□□□□ -1.2
SHMT2-215ENST00000554656 IGKV3-20P01619 116 aa7.53□□□□□ -1.2
SHMT2-215ENST00000554656 P01737 135 aa7.53□□□□□ -1.2
SHMT2-215ENST00000554656 RAB5AP20339 215 aa7.53□□□□□ -1.2
SHMT2-215ENST00000554656 COX19Q49B96 90 aa7.53□□□□□ -1.2
SHMT2-215ENST00000554656 PRR27Q6MZM9 219 aa7.53□□□□□ -1.2
SHMT2-215ENST00000554656 LINC00336Q6ZUF6 198 aa7.53□□□□□ -1.2
SHMT2-215ENST00000554656 POM121L12Q8N7R1 296 aa7.53□□□□□ -1.2
SHMT2-215ENST00000554656 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.53□□□□□ -1.2
SHMT2-215ENST00000554656 OR8A1Q8NGG7 326 aa7.53□□□□□ -1.2
SHMT2-215ENST00000554656 NEU1Q99519 415 aa7.53□□□□□ -1.2
SHMT2-215ENST00000554656 C1QTNF4Q9BXJ3 329 aa7.53□□□□□ -1.2
SHMT2-215ENST00000554656 GFRA4Q9GZZ7 299 aa7.53□□□□□ -1.2
SHMT2-215ENST00000554656 AGPAT4-IT1Q9H0P7 198 aa7.53□□□□□ -1.2
SHMT2-215ENST00000554656 RNASE7Q9H1E1 156 aaKnown RBP7.53□□□□□ -1.2
SHMT2-215ENST00000554656 SAV1Q9H4B6 383 aaPredicted RBP7.53□□□□□ -1.2
SHMT2-215ENST00000554656 RPP21Q9H633 154 aaKnown RBP7.53□□□□□ -1.2
SHMT2-215ENST00000554656 PKD1P98161 4303 aa7.52□□□□□ -1.21
SHMT2-215ENST00000554656 F6UB75 175 aa7.52□□□□□ -1.21
SHMT2-215ENST00000554656 M0R2N4 97 aa7.52□□□□□ -1.21
SHMT2-215ENST00000554656 DUSP14O95147 198 aaKnown RBP7.52□□□□□ -1.21
SHMT2-215ENST00000554656 CRISP2P16562 243 aa7.52□□□□□ -1.21
SHMT2-215ENST00000554656 RPS20P60866 119 aaKnown RBP7.52□□□□□ -1.21
SHMT2-215ENST00000554656 NUTF2P61970 127 aaKnown RBP7.52□□□□□ -1.21
SHMT2-215ENST00000554656 HIST1H1AQ02539 215 aaPredicted RBP7.52□□□□□ -1.21
SHMT2-215ENST00000554656 FAM162BQ5T6X4 162 aa7.52□□□□□ -1.21
SHMT2-215ENST00000554656 TSKUQ8WUA8 353 aa7.52□□□□□ -1.21
SHMT2-215ENST00000554656 FAM210BQ96KR6 192 aa7.52□□□□□ -1.21
SHMT2-215ENST00000554656 URGCP-MRPS24S4R325 110 aa7.52□□□□□ -1.21
SHMT2-215ENST00000554656 IGHV3OR16-12A0A075B7B8 117 aa7.51□□□□□ -1.21
SHMT2-215ENST00000554656 A0A1W2PPQ1 181 aa7.51□□□□□ -1.21
SHMT2-215ENST00000554656 XKRY2A2RUG3 117 aa7.51□□□□□ -1.21
SHMT2-215ENST00000554656 A8MTW9 85 aa7.51□□□□□ -1.21
SHMT2-215ENST00000554656 FABP5P3A8MUU1 101 aa7.51□□□□□ -1.21
SHMT2-215ENST00000554656 CXCL1P09341 107 aa7.51□□□□□ -1.21
SHMT2-215ENST00000554656 P0DMU3 169 aa7.51□□□□□ -1.21
SHMT2-215ENST00000554656 FAM231AP0DMU4 169 aa7.51□□□□□ -1.21
SHMT2-215ENST00000554656 FAM231CP0DMU5 169 aa7.51□□□□□ -1.21
SHMT2-215ENST00000554656 EMP1P54849 157 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms