RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 ATP6V0E2Q8NHE4 81 aa13.08□□□□□ -0.32
PPP4R3A-202ENST00000554390 SFTA2Q6UW10 78 aa13.08□□□□□ -0.32
PPP4R3A-202ENST00000554390 RNF183Q96D59 192 aa13.08□□□□□ -0.32
PPP4R3A-202ENST00000554390 CNFNQ9BYD5 112 aa13.08□□□□□ -0.32
PPP4R3A-202ENST00000554390 NBR2O15453 112 aa13.07□□□□□ -0.32
PPP4R3A-202ENST00000554390 TRAV26-2A0A0B4J265 109 aa13.07□□□□□ -0.32
PPP4R3A-202ENST00000554390 F8W735 103 aaPredicted RBP13.07□□□□□ -0.32
PPP4R3A-202ENST00000554390 TSPAN13O95857 204 aa13.07□□□□□ -0.32
PPP4R3A-202ENST00000554390 EFNA4P52798 201 aa13.07□□□□□ -0.32
PPP4R3A-202ENST00000554390 DLX4Q92988 240 aaPredicted RBP13.07□□□□□ -0.32
PPP4R3A-202ENST00000554390 PTH2Q96A98 100 aa13.07□□□□□ -0.32
PPP4R3A-202ENST00000554390 CD3EP07766 207 aa13.06□□□□□ -0.32
PPP4R3A-202ENST00000554390 HIVEP3Q5T1R4 2406 aa13.06□□□□□ -0.32
PPP4R3A-202ENST00000554390 MYMXA0A1B0GTQ4 84 aa13.06□□□□□ -0.32
PPP4R3A-202ENST00000554390 PSMB2P49721 201 aa13.05□□□□□ -0.32
PPP4R3A-202ENST00000554390 LAGE3Q14657 143 aa13.05□□□□□ -0.32
PPP4R3A-202ENST00000554390 PLNP26678 52 aa13.05□□□□□ -0.32
PPP4R3A-202ENST00000554390 PSMG3-AS1Q96PY0 264 aa13.05□□□□□ -0.32
PPP4R3A-202ENST00000554390 SMAD5-AS1Q9Y6J3 95 aa13.05□□□□□ -0.32
PPP4R3A-202ENST00000554390 CREBBPQ92793 2442 aa13.05□□□□□ -0.32
PPP4R3A-202ENST00000554390 OR11H12B2RN74 326 aa13.05□□□□□ -0.32
PPP4R3A-202ENST00000554390 ECSCRQ19T08 205 aa13.05□□□□□ -0.32
PPP4R3A-202ENST00000554390 OR11H1Q8NG94 326 aa13.05□□□□□ -0.32
PPP4R3A-202ENST00000554390 OR11H2Q8NH07 326 aa13.05□□□□□ -0.32
PPP4R3A-202ENST00000554390 LINC00527Q9UJ94 153 aa13.05□□□□□ -0.32
PPP4R3A-202ENST00000554390 SORL1Q92673 2214 aa13.05□□□□□ -0.32
PPP4R3A-202ENST00000554390 LOC107984156A0A0G2JMH3 177 aa13.04□□□□□ -0.32
PPP4R3A-202ENST00000554390 LINC01549A6NIU2 74 aa13.04□□□□□ -0.32
PPP4R3A-202ENST00000554390 DEFB1P60022 68 aa13.04□□□□□ -0.32
PPP4R3A-202ENST00000554390 ARL17AQ8IVW1 177 aa13.04□□□□□ -0.32
PPP4R3A-202ENST00000554390 ERG28Q9UKR5 140 aa13.04□□□□□ -0.32
PPP4R3A-202ENST00000554390 FABP5P3A8MUU1 101 aa13.04□□□□□ -0.32
PPP4R3A-202ENST00000554390 TRGV3P03979 118 aa13.04□□□□□ -0.32
PPP4R3A-202ENST00000554390 ZFP2Q6ZN57 461 aa13.04□□□□□ -0.32
PPP4R3A-202ENST00000554390 DOPEY2Q9Y3R5 2298 aa13.04□□□□□ -0.32
PPP4R3A-202ENST00000554390 LINC01619G3V211 115 aa13.03□□□□□ -0.32
PPP4R3A-202ENST00000554390 IGHG4P01861 327 aa13.03□□□□□ -0.32
PPP4R3A-202ENST00000554390 C21orf62Q9NYP8 219 aa13.03□□□□□ -0.32
PPP4R3A-202ENST00000554390 DPM3Q9P2X0 92 aa13.03□□□□□ -0.32
PPP4R3A-202ENST00000554390 CSPG4Q6UVK1 2322 aa13.03□□□□□ -0.32
PPP4R3A-202ENST00000554390 LINC01548A6NM66 108 aa13.03□□□□□ -0.32
PPP4R3A-202ENST00000554390 LY6LH3BQJ8 138 aa13.03□□□□□ -0.32
PPP4R3A-202ENST00000554390 CARD19Q96LW7 228 aa13.03□□□□□ -0.32
PPP4R3A-202ENST00000554390 CENPEQ02224 2701 aa13.03□□□□□ -0.32
PPP4R3A-202ENST00000554390 C5orf64Q2M2E5 130 aa13.02□□□□□ -0.32
PPP4R3A-202ENST00000554390 IGF2-ASQ6U949 168 aa13.02□□□□□ -0.32
PPP4R3A-202ENST00000554390 IL17RELQ6ZVW7 336 aa13.02□□□□□ -0.32
PPP4R3A-202ENST00000554390 SS18L2Q9UHA2 77 aa13.02□□□□□ -0.32
PPP4R3A-202ENST00000554390 F8VRH5 84 aa13.02□□□□□ -0.33
PPP4R3A-202ENST00000554390 LGALS1P09382 135 aaKnown RBP13.02□□□□□ -0.33
PPP4R3A-202ENST00000554390 MFAP4P55083 255 aa13.02□□□□□ -0.33
PPP4R3A-202ENST00000554390 SRSF2Q01130 221 aaKnown RBP13.02□□□□□ -0.33
PPP4R3A-202ENST00000554390 CFHR4Q92496 578 aa13.02□□□□□ -0.33
PPP4R3A-202ENST00000554390 H7C1H1 209 aa13.01□□□□□ -0.33
PPP4R3A-202ENST00000554390 NRACQ8N912 160 aa13.01□□□□□ -0.33
PPP4R3A-202ENST00000554390 KLK15Q9H2R5 256 aa13.01□□□□□ -0.33
PPP4R3A-202ENST00000554390 B9A039 149 aa13.01□□□□□ -0.33
PPP4R3A-202ENST00000554390 PRSS29PA6NIE9 313 aa13□□□□□ -0.33
PPP4R3A-202ENST00000554390 CTSGP08311 255 aa13□□□□□ -0.33
PPP4R3A-202ENST00000554390 RPL7P18124 248 aaKnown RBP13□□□□□ -0.33
PPP4R3A-202ENST00000554390 PPDPFLQ8WWR9 84 aa13□□□□□ -0.33
PPP4R3A-202ENST00000554390 UFC1Q9Y3C8 167 aa13□□□□□ -0.33
PPP4R3A-202ENST00000554390 G3V318 75 aa13□□□□□ -0.33
PPP4R3A-202ENST00000554390 TMEM78Q5T7P6 136 aa13□□□□□ -0.33
PPP4R3A-202ENST00000554390 ANAPC13Q9BS18 74 aa13□□□□□ -0.33
PPP4R3A-202ENST00000554390 IGLV11-55A0A075B6I3 123 aa12.99□□□□□ -0.33
PPP4R3A-202ENST00000554390 C11orf21Q9P2W6 132 aa12.99□□□□□ -0.33
PPP4R3A-202ENST00000554390 IGHV3OR16-10A0A075B7F0 116 aa12.99□□□□□ -0.33
PPP4R3A-202ENST00000554390 CCL21O00585 134 aa12.99□□□□□ -0.33
PPP4R3A-202ENST00000554390 RAB1BQ9H0U4 201 aa12.99□□□□□ -0.33
PPP4R3A-202ENST00000554390 RAXQ9Y2V3 346 aa12.99□□□□□ -0.33
PPP4R3A-202ENST00000554390 UTP20O75691 2785 aaKnown RBP12.99□□□□□ -0.33
PPP4R3A-202ENST00000554390 IGKV3-7A0A075B6H7 116 aa12.99□□□□□ -0.33
PPP4R3A-202ENST00000554390 TEN1Q86WV5 123 aa12.99□□□□□ -0.33
PPP4R3A-202ENST00000554390 CLEC3BP05452 202 aa12.98□□□□□ -0.33
PPP4R3A-202ENST00000554390 TRAV12-1A0A0B4J245 112 aa12.98□□□□□ -0.33
PPP4R3A-202ENST00000554390 IGKV3D-20A0A0C4DH25 116 aa12.98□□□□□ -0.33
PPP4R3A-202ENST00000554390 A6NJY4 79 aa12.98□□□□□ -0.33
PPP4R3A-202ENST00000554390 FOXC1Q12948 553 aa12.98□□□□□ -0.33
PPP4R3A-202ENST00000554390 SRSF9Q13242 221 aaKnown RBP eCLIP12.98□□□□□ -0.33
PPP4R3A-202ENST00000554390 SRSF8Q9BRL6 282 aaKnown RBP12.98□□□□□ -0.33
PPP4R3A-202ENST00000554390 UBE2D1P51668 147 aa12.97□□□□□ -0.33
PPP4R3A-202ENST00000554390 IGF1P05019 195 aa12.97□□□□□ -0.33
PPP4R3A-202ENST00000554390 UBE2D3P61077 147 aa12.97□□□□□ -0.33
PPP4R3A-202ENST00000554390 UBE2D2P62837 147 aa12.97□□□□□ -0.33
PPP4R3A-202ENST00000554390 C15orf32Q32M92 178 aa12.97□□□□□ -0.33
PPP4R3A-202ENST00000554390 SCGB1D4Q6XE38 83 aa12.97□□□□□ -0.33
PPP4R3A-202ENST00000554390 PLEKHB2Q96CS7 222 aa12.97□□□□□ -0.33
PPP4R3A-202ENST00000554390 PRADC1Q9BSG0 188 aa12.97□□□□□ -0.33
PPP4R3A-202ENST00000554390 ZNF815PA8K554 130 aa12.96□□□□□ -0.33
PPP4R3A-202ENST00000554390 CLEC19AQ6UXS0 136 aa12.96□□□□□ -0.33
PPP4R3A-202ENST00000554390 ZFP36P26651 326 aaKnown RBP12.96□□□□□ -0.33
PPP4R3A-202ENST00000554390 VMO1Q7Z5L0 202 aa12.96□□□□□ -0.33
PPP4R3A-202ENST00000554390 VKORC1Q9BQB6 163 aa12.96□□□□□ -0.33
PPP4R3A-202ENST00000554390 SCGB3A1Q96QR1 104 aa12.96□□□□□ -0.34
PPP4R3A-202ENST00000554390 KIR2DL4Q99706 377 aa12.96□□□□□ -0.34
PPP4R3A-202ENST00000554390 GAGE5Q13069 117 aa12.95□□□□□ -0.34
PPP4R3A-202ENST00000554390 GAGE6Q13070 117 aa12.95□□□□□ -0.34
PPP4R3A-202ENST00000554390 H3BVH4 76 aa12.95□□□□□ -0.34
PPP4R3A-202ENST00000554390 TCL1BO95988 128 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms