RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 HYDINQ4G0P3 5121 aa9.34□□□□□ -0.91
SHMT2-211ENST00000554310 TRAV12-2A0A075B6T6 113 aa9.34□□□□□ -0.91
SHMT2-211ENST00000554310 PGPA6NDG6 321 aa9.34□□□□□ -0.91
SHMT2-211ENST00000554310 IGLL5B9A064 214 aa9.34□□□□□ -0.91
SHMT2-211ENST00000554310 PRAC2D3DTV9 90 aa9.34□□□□□ -0.91
SHMT2-211ENST00000554310 NPIPB6E9PJ23 425 aa9.34□□□□□ -0.91
SHMT2-211ENST00000554310 IGLV2-8P01709 118 aa9.34□□□□□ -0.91
SHMT2-211ENST00000554310 SLC25A5P05141 298 aaKnown RBP9.34□□□□□ -0.91
SHMT2-211ENST00000554310 RANP62826 216 aaKnown RBP9.34□□□□□ -0.91
SHMT2-211ENST00000554310 TMEM183BQ1AE95 376 aa9.34□□□□□ -0.91
SHMT2-211ENST00000554310 FAM222AQ5U5X8 452 aa9.34□□□□□ -0.91
SHMT2-211ENST00000554310 LGALS9CQ6DKI2 356 aa9.34□□□□□ -0.91
SHMT2-211ENST00000554310 C5orf17Q8NAS9 161 aa9.34□□□□□ -0.91
SHMT2-211ENST00000554310 SMIM12Q96EX1 92 aa9.34□□□□□ -0.91
SHMT2-211ENST00000554310 ODF3Q96PU9 254 aa9.34□□□□□ -0.91
SHMT2-211ENST00000554310 C20orf144Q9BQM9 153 aa9.34□□□□□ -0.91
SHMT2-211ENST00000554310 AAMDCQ9H7C9 122 aa9.34□□□□□ -0.91
SHMT2-211ENST00000554310 OTORQ9NRC9 128 aa9.34□□□□□ -0.91
SHMT2-211ENST00000554310 KLF12Q9Y4X4 402 aa9.34□□□□□ -0.91
SHMT2-211ENST00000554310 DEFB131BA0A096LNP1 70 aa9.33□□□□□ -0.92
SHMT2-211ENST00000554310 A0A1W2PPQ1 181 aa9.33□□□□□ -0.92
SHMT2-211ENST00000554310 PHOX2AO14813 284 aa9.33□□□□□ -0.92
SHMT2-211ENST00000554310 TRGC2P03986 189 aa9.33□□□□□ -0.92
SHMT2-211ENST00000554310 FAM3BP58499 235 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-211ENST00000554310 SNRPEP62304 92 aaKnown RBP9.33□□□□□ -0.92
SHMT2-211ENST00000554310 LYPD1Q8N2G4 141 aa9.33□□□□□ -0.92
SHMT2-211ENST00000554310 BLNKQ8WV28 456 aa9.33□□□□□ -0.92
SHMT2-211ENST00000554310 ATG101Q9BSB4 218 aa9.33□□□□□ -0.92
SHMT2-211ENST00000554310 Q9H3A6 140 aa9.33□□□□□ -0.92
SHMT2-211ENST00000554310 IL36BQ9NZH7 164 aa9.33□□□□□ -0.92
SHMT2-211ENST00000554310 IGHV4-4A0A075B6R2 117 aa9.32□□□□□ -0.92
SHMT2-211ENST00000554310 PRB4P10163 310 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-211ENST00000554310 LEPP41159 167 aa9.32□□□□□ -0.92
SHMT2-211ENST00000554310 ERVFC1-1P60608 527 aa9.32□□□□□ -0.92
SHMT2-211ENST00000554310 SMUG1Q53HV7 270 aa9.32□□□□□ -0.92
SHMT2-211ENST00000554310 APLNQ9ULZ1 77 aa9.32□□□□□ -0.92
SHMT2-211ENST00000554310 V9GYV3 84 aa9.32□□□□□ -0.92
SHMT2-211ENST00000554310 TRBV6-1A0A0K0K1D8 114 aa9.31□□□□□ -0.92
SHMT2-211ENST00000554310 LYRM9A8MSI8 78 aa9.31□□□□□ -0.92
SHMT2-211ENST00000554310 ZNF705GA8MUZ8 300 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-211ENST00000554310 M0R3E3 92 aa9.31□□□□□ -0.92
SHMT2-211ENST00000554310 HIST1H2BKO60814 126 aa9.31□□□□□ -0.92
SHMT2-211ENST00000554310 HIST1H2BJP06899 126 aa9.31□□□□□ -0.92
SHMT2-211ENST00000554310 HIST1H2BOP23527 126 aa9.31□□□□□ -0.92
SHMT2-211ENST00000554310 HIST1H2BBP33778 126 aa9.31□□□□□ -0.92
SHMT2-211ENST00000554310 HIST1H2BDP58876 126 aa9.31□□□□□ -0.92
SHMT2-211ENST00000554310 UBE2G1P62253 170 aa9.31□□□□□ -0.92
SHMT2-211ENST00000554310 HIST1H2BCP62807 126 aa9.31□□□□□ -0.92
SHMT2-211ENST00000554310 HIST2H2BEQ16778 126 aa9.31□□□□□ -0.92
SHMT2-211ENST00000554310 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-211ENST00000554310 GFI1BQ5VTD9 330 aa9.31□□□□□ -0.92
SHMT2-211ENST00000554310 FAM231DQ6ZW35 169 aa9.31□□□□□ -0.92
SHMT2-211ENST00000554310 FRZBQ92765 325 aa9.31□□□□□ -0.92
SHMT2-211ENST00000554310 HIST1H2BHQ93079 126 aa9.31□□□□□ -0.92
SHMT2-211ENST00000554310 FMC1Q96HJ9 113 aa9.31□□□□□ -0.92
SHMT2-211ENST00000554310 LINC01587Q99440 93 aa9.31□□□□□ -0.92
SHMT2-211ENST00000554310 HIST1H2BNQ99877 126 aa9.31□□□□□ -0.92
SHMT2-211ENST00000554310 HIST1H2BMQ99879 126 aa9.31□□□□□ -0.92
SHMT2-211ENST00000554310 TCRAP04437 139 aa9.3□□□□□ -0.92
SHMT2-211ENST00000554310 TRGC1P0CF51 173 aa9.3□□□□□ -0.92
SHMT2-211ENST00000554310 CT45A10P0DMU9 189 aa9.3□□□□□ -0.92
SHMT2-211ENST00000554310 GNG5P63218 68 aa9.3□□□□□ -0.92
SHMT2-211ENST00000554310 FABP9Q0Z7S8 132 aa9.3□□□□□ -0.92
SHMT2-211ENST00000554310 OR5I1Q13606 314 aa9.3□□□□□ -0.92
SHMT2-211ENST00000554310 BAGE2Q86Y30 109 aa9.3□□□□□ -0.92
SHMT2-211ENST00000554310 EXOC3-AS1Q8N2X6 119 aa9.3□□□□□ -0.92
SHMT2-211ENST00000554310 C16orf74Q96GX8 76 aa9.3□□□□□ -0.92
SHMT2-211ENST00000554310 NDUFAF3Q9BU61 184 aa9.3□□□□□ -0.92
SHMT2-211ENST00000554310 PLAC8L1A1L4L8 177 aa9.29□□□□□ -0.92
SHMT2-211ENST00000554310 MGST1P10620 155 aaKnown RBP9.29□□□□□ -0.92
SHMT2-211ENST00000554310 HOXA5P20719 270 aa9.29□□□□□ -0.92
SHMT2-211ENST00000554310 DAD1P61803 113 aa9.29□□□□□ -0.92
SHMT2-211ENST00000554310 RPL19P84098 196 aaKnown RBP9.29□□□□□ -0.92
SHMT2-211ENST00000554310 IBA57Q5T440 356 aaKnown RBP9.29□□□□□ -0.92
SHMT2-211ENST00000554310 ZNF493Q6ZR52 646 aa9.29□□□□□ -0.92
SHMT2-211ENST00000554310 ARL6IP6Q8N6S5 226 aa9.29□□□□□ -0.92
SHMT2-211ENST00000554310 TMEM263Q8WUH6 116 aaKnown RBP9.29□□□□□ -0.92
SHMT2-211ENST00000554310 LINC00477Q96M19 166 aa9.29□□□□□ -0.92
SHMT2-211ENST00000554310 LINC00479Q96M42 142 aa9.29□□□□□ -0.92
SHMT2-211ENST00000554310 TRAV34A0A0B4J273 112 aa9.28□□□□□ -0.92
SHMT2-211ENST00000554310 LTAP01374 205 aa9.28□□□□□ -0.92
SHMT2-211ENST00000554310 S100A8P05109 93 aa9.28□□□□□ -0.92
SHMT2-211ENST00000554310 AKR1D1P51857 326 aa9.28□□□□□ -0.92
SHMT2-211ENST00000554310 NDUFA6P56556 154 aa9.28□□□□□ -0.92
SHMT2-211ENST00000554310 KIR3DS1Q14943 382 aa9.28□□□□□ -0.92
SHMT2-211ENST00000554310 C9orf47Q6ZRZ4 202 aa9.28□□□□□ -0.92
SHMT2-211ENST00000554310 CMTM2Q8TAZ6 248 aa9.28□□□□□ -0.92
SHMT2-211ENST00000554310 RNASE8Q8TDE3 154 aaKnown RBP9.28□□□□□ -0.92
SHMT2-211ENST00000554310 MLST8Q9BVC4 326 aa9.28□□□□□ -0.92
SHMT2-211ENST00000554310 RNASE7Q9H1E1 156 aaKnown RBP9.28□□□□□ -0.92
SHMT2-211ENST00000554310 GATCO43716 136 aaKnown RBP9.27□□□□□ -0.93
SHMT2-211ENST00000554310 PRM2P04554 102 aa9.27□□□□□ -0.93
SHMT2-211ENST00000554310 HTN1P15515 57 aa9.27□□□□□ -0.93
SHMT2-211ENST00000554310 AZU1P20160 251 aa9.27□□□□□ -0.93
SHMT2-211ENST00000554310 ERCC8Q13216 396 aa9.27□□□□□ -0.93
SHMT2-211ENST00000554310 COX19Q49B96 90 aa9.27□□□□□ -0.93
SHMT2-211ENST00000554310 TMEM78Q5T7P6 136 aa9.27□□□□□ -0.93
SHMT2-211ENST00000554310 LINC00518Q8N0U6 118 aa9.27□□□□□ -0.93
SHMT2-211ENST00000554310 FAM19A4Q96LR4 140 aa9.27□□□□□ -0.93
SHMT2-211ENST00000554310 ZNF492Q9P255 531 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms