RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 A0A1W2PRE2 83 aa5.95□□□□□ -1.46
PSEN1-209ENST00000553855 C1QBP02746 253 aa5.95□□□□□ -1.46
PSEN1-209ENST00000553855 TCRAP04437 139 aa5.95□□□□□ -1.46
PSEN1-209ENST00000553855 ATP5G1P05496 136 aa5.95□□□□□ -1.46
PSEN1-209ENST00000553855 AZU1P20160 251 aa5.95□□□□□ -1.46
PSEN1-209ENST00000553855 ATP5G3P48201 142 aa5.95□□□□□ -1.46
PSEN1-209ENST00000553855 RAB5CP51148 216 aa5.95□□□□□ -1.46
PSEN1-209ENST00000553855 FGF8P55075 233 aaPredicted RBP5.95□□□□□ -1.46
PSEN1-209ENST00000553855 UBE2G2P60604 165 aa5.95□□□□□ -1.46
PSEN1-209ENST00000553855 GNG5P63218 68 aa5.95□□□□□ -1.46
PSEN1-209ENST00000553855 CST9LP1Q5W188 147 aa5.95□□□□□ -1.46
PSEN1-209ENST00000553855 CYB561D1Q8N8Q1 229 aa5.95□□□□□ -1.46
PSEN1-209ENST00000553855 SUN5Q8TC36 379 aa5.95□□□□□ -1.46
PSEN1-209ENST00000553855 SFT2D1Q8WV19 159 aa5.95□□□□□ -1.46
PSEN1-209ENST00000553855 TREM1Q9NP99 234 aa5.95□□□□□ -1.46
PSEN1-209ENST00000553855 EPDR1Q9UM22 224 aa5.95□□□□□ -1.46
PSEN1-209ENST00000553855 TRGV2A0A075B6R0 118 aa5.94□□□□□ -1.46
PSEN1-209ENST00000553855 TRAV21A0A0B4J279 112 aa5.94□□□□□ -1.46
PSEN1-209ENST00000553855 A0A1B0GVG6 124 aa5.94□□□□□ -1.46
PSEN1-209ENST00000553855 UBE2G1P62253 170 aa5.94□□□□□ -1.46
PSEN1-209ENST00000553855 CD300CQ08708 224 aa5.94□□□□□ -1.46
PSEN1-209ENST00000553855 ZNF415Q09FC8 603 aa5.94□□□□□ -1.46
PSEN1-209ENST00000553855 ANXA2RQ3ZCQ2 193 aa5.94□□□□□ -1.46
PSEN1-209ENST00000553855 LGALSLQ3ZCW2 172 aaPredicted RBP5.94□□□□□ -1.46
PSEN1-209ENST00000553855 SAPCD1Q5SSQ6 148 aa5.94□□□□□ -1.46
PSEN1-209ENST00000553855 ZFAND2AQ8N6M9 145 aa5.94□□□□□ -1.46
PSEN1-209ENST00000553855 RNASE8Q8TDE3 154 aaKnown RBP5.94□□□□□ -1.46
PSEN1-209ENST00000553855 LINC00476Q8WZB0 136 aa5.94□□□□□ -1.46
PSEN1-209ENST00000553855 HIST1H2BAQ96A08 127 aa5.94□□□□□ -1.46
PSEN1-209ENST00000553855 KCNS1Q96KK3 526 aa5.94□□□□□ -1.46
PSEN1-209ENST00000553855 FAM19A4Q96LR4 140 aa5.94□□□□□ -1.46
PSEN1-209ENST00000553855 LINC00467Q9BRT7 94 aa5.94□□□□□ -1.46
PSEN1-209ENST00000553855 TCEAL7Q9BRU2 100 aa5.94□□□□□ -1.46
PSEN1-209ENST00000553855 ATG101Q9BSB4 218 aa5.94□□□□□ -1.46
PSEN1-209ENST00000553855 NAGKQ9UJ70 344 aa5.94□□□□□ -1.46
PSEN1-209ENST00000553855 F5H768 121 aa5.93□□□□□ -1.46
PSEN1-209ENST00000553855 ZNF324O75467 553 aaPredicted RBP5.93□□□□□ -1.46
PSEN1-209ENST00000553855 PRM2P04554 102 aa5.93□□□□□ -1.46
PSEN1-209ENST00000553855 NPSP0C0P6 89 aa5.93□□□□□ -1.46
PSEN1-209ENST00000553855 HOXA5P20719 270 aa5.93□□□□□ -1.46
PSEN1-209ENST00000553855 FLI1Q01543 452 aaPredicted RBP5.93□□□□□ -1.46
PSEN1-209ENST00000553855 ZNF726P1Q15940 193 aa5.93□□□□□ -1.46
PSEN1-209ENST00000553855 SMUG1Q53HV7 270 aa5.93□□□□□ -1.46
PSEN1-209ENST00000553855 IBA57Q5T440 356 aaKnown RBP5.93□□□□□ -1.46
PSEN1-209ENST00000553855 LGALS9CQ6DKI2 356 aa5.93□□□□□ -1.46
PSEN1-209ENST00000553855 SSX7Q7RTT5 188 aa5.93□□□□□ -1.46
PSEN1-209ENST00000553855 PRNTQ86SH4 94 aa5.93□□□□□ -1.46
PSEN1-209ENST00000553855 SLC51BQ86UW2 128 aa5.93□□□□□ -1.46
PSEN1-209ENST00000553855 UBE2DNLQ8IWF7 75 aa5.93□□□□□ -1.46
PSEN1-209ENST00000553855 TMEM75Q8N9X5 138 aa5.93□□□□□ -1.46
PSEN1-209ENST00000553855 TMPRSS5Q9H3S3 457 aa5.93□□□□□ -1.46
PSEN1-209ENST00000553855 PSG8Q9UQ74 426 aa5.93□□□□□ -1.46
PSEN1-209ENST00000553855 ARL2-SNX15V9GYD0 113 aa5.93□□□□□ -1.46
PSEN1-209ENST00000553855 TRGV1A0A0A0MS02 117 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 TRAV8-1A0A0A6YYK1 113 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 A0A1B0GV50 99 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 FAM74A7A6NL05 159 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 GGTLC3B5MD39 225 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 PEX7O00628 323 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 GAGE7O76087 117 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 GAGE12FP0CL80 117 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 GAGE12GP0CL81 117 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 GAGE12IP0CL82 117 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 P0DMU3 169 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 FAM231AP0DMU4 169 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 FAM231CP0DMU5 169 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 AKR1C3P42330 323 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 FHITP49789 147 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 DAZ2Q13117 558 aaKnown RBP5.92□□□□□ -1.46
PSEN1-209ENST00000553855 MUC21Q5SSG8 566 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 Q6AWC8 147 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 C15orf53Q8NAA6 179 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 MBD3L1Q8WWY6 194 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 SGK494Q96LW2 274 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 SDF2L1Q9HCN8 221 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 GSN-AS1Q9NRJ2 163 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 APLNQ9ULZ1 77 aa5.92□□□□□ -1.46
PSEN1-209ENST00000553855 STARD9Q9P2P6 4700 aa5.91□□□□□ -1.46
PSEN1-209ENST00000553855 DNAH7Q8WXX0 4024 aa5.91□□□□□ -1.46
PSEN1-209ENST00000553855 PLAC8L1A1L4L8 177 aa5.91□□□□□ -1.46
PSEN1-209ENST00000553855 PAGE4O60829 102 aa5.91□□□□□ -1.46
PSEN1-209ENST00000553855 GCGP01275 180 aa5.91□□□□□ -1.46
PSEN1-209ENST00000553855 IFNA1P01562 189 aa5.91□□□□□ -1.46
PSEN1-209ENST00000553855 S100A9P06702 114 aaKnown RBP5.91□□□□□ -1.46
PSEN1-209ENST00000553855 TCL1AP56279 114 aa5.91□□□□□ -1.46
PSEN1-209ENST00000553855 BLOC1S1P78537 153 aa5.91□□□□□ -1.46
PSEN1-209ENST00000553855 OR5I1Q13606 314 aa5.91□□□□□ -1.46
PSEN1-209ENST00000553855 TMEM183BQ1AE95 376 aa5.91□□□□□ -1.46
PSEN1-209ENST00000553855 TMEM183AQ8IXX5 376 aa5.91□□□□□ -1.46
PSEN1-209ENST00000553855 FMC1Q96HJ9 113 aa5.91□□□□□ -1.46
PSEN1-209ENST00000553855 SPXQ9BT56 116 aa5.91□□□□□ -1.46
PSEN1-209ENST00000553855 MANBALQ9NQG1 85 aa5.91□□□□□ -1.46
PSEN1-209ENST00000553855 PRYO14603 147 aa5.9□□□□□ -1.46
PSEN1-209ENST00000553855 PFN1P07737 140 aaKnown RBP5.9□□□□□ -1.46
PSEN1-209ENST00000553855 S100A4P26447 101 aaKnown RBP5.9□□□□□ -1.46
PSEN1-209ENST00000553855 LGALS9BQ3B8N2 356 aa5.9□□□□□ -1.46
PSEN1-209ENST00000553855 PRR9Q5T870 116 aa5.9□□□□□ -1.46
PSEN1-209ENST00000553855 ZFP30Q9Y2G7 519 aa5.9□□□□□ -1.46
PSEN1-209ENST00000553855 RYR1P21817 5038 aa5.9□□□□□ -1.47
PSEN1-209ENST00000553855 TRAV34A0A0B4J273 112 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms