RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 GNG5P63218 68 aa12.22□□□□□ -0.45
FOXN3-204ENST00000553840 ZNF345Q14585 488 aa12.22□□□□□ -0.45
FOXN3-204ENST00000553840 PCNPQ8WW12 178 aaKnown RBP12.22□□□□□ -0.45
FOXN3-204ENST00000553840 SDF2L1Q9HCN8 221 aa12.22□□□□□ -0.45
FOXN3-204ENST00000553840 F6UZH7 168 aa12.21□□□□□ -0.45
FOXN3-204ENST00000553840 SIVA1O15304 175 aa12.21□□□□□ -0.45
FOXN3-204ENST00000553840 TCRAP04437 139 aa12.21□□□□□ -0.45
FOXN3-204ENST00000553840 IQCF2Q8IXL9 164 aa12.21□□□□□ -0.45
FOXN3-204ENST00000553840 SUN5Q8TC36 379 aa12.21□□□□□ -0.45
FOXN3-204ENST00000553840 CYTL1Q9NRR1 136 aa12.21□□□□□ -0.45
FOXN3-204ENST00000553840 KANTRA0A1W2PQU2 76 aa12.2□□□□□ -0.46
FOXN3-204ENST00000553840 FBLL1A6NHQ2 334 aaKnown RBP12.2□□□□□ -0.46
FOXN3-204ENST00000553840 M0R2P5 195 aa12.2□□□□□ -0.46
FOXN3-204ENST00000553840 GNRH2O43555 120 aa12.2□□□□□ -0.46
FOXN3-204ENST00000553840 SUMO1P63165 101 aaKnown RBP12.2□□□□□ -0.46
FOXN3-204ENST00000553840 ZFP69Q49AA0 526 aa12.2□□□□□ -0.46
FOXN3-204ENST00000553840 NEGR1Q7Z3B1 354 aa12.2□□□□□ -0.46
FOXN3-204ENST00000553840 SGK494Q96LW2 274 aa12.2□□□□□ -0.46
FOXN3-204ENST00000553840 TRAV4A0A0B4J268 109 aa12.19□□□□□ -0.46
FOXN3-204ENST00000553840 IGHV3-16A0A0C4DH30 117 aa12.19□□□□□ -0.46
FOXN3-204ENST00000553840 PFDN1O60925 122 aa12.19□□□□□ -0.46
FOXN3-204ENST00000553840 ORM1P02763 201 aa12.19□□□□□ -0.46
FOXN3-204ENST00000553840 TYMSP04818 313 aa12.19□□□□□ -0.46
FOXN3-204ENST00000553840 SFTA3P0C7M3 94 aa12.19□□□□□ -0.46
FOXN3-204ENST00000553840 SRIP30626 198 aa12.19□□□□□ -0.46
FOXN3-204ENST00000553840 TMUB2Q71RG4 321 aa12.19□□□□□ -0.46
FOXN3-204ENST00000553840 OR4C5Q8NGB2 326 aa12.19□□□□□ -0.46
FOXN3-204ENST00000553840 TVP23CQ96ET8 276 aa12.19□□□□□ -0.46
FOXN3-204ENST00000553840 ZNF479Q96JC4 524 aa12.19□□□□□ -0.46
FOXN3-204ENST00000553840 FAT2Q9NYQ8 4349 aa12.19□□□□□ -0.46
FOXN3-204ENST00000553840 DNAH2Q9P225 4427 aa12.18□□□□□ -0.46
FOXN3-204ENST00000553840 BCL2L11O43521 198 aa12.18□□□□□ -0.46
FOXN3-204ENST00000553840 NXPH4O95158 308 aa12.18□□□□□ -0.46
FOXN3-204ENST00000553840 C1QBP02746 253 aa12.18□□□□□ -0.46
FOXN3-204ENST00000553840 FLI1Q01543 452 aaPredicted RBP12.18□□□□□ -0.46
FOXN3-204ENST00000553840 LYPD5Q6UWN5 251 aa12.18□□□□□ -0.46
FOXN3-204ENST00000553840 ZNF575Q86XF7 245 aa12.18□□□□□ -0.46
FOXN3-204ENST00000553840 CYB561D1Q8N8Q1 229 aa12.18□□□□□ -0.46
FOXN3-204ENST00000553840 ZNF471Q9BX82 626 aaPredicted RBP12.18□□□□□ -0.46
FOXN3-204ENST00000553840 KRTAP1-5Q9BYS1 174 aa12.18□□□□□ -0.46
FOXN3-204ENST00000553840 EPDR1Q9UM22 224 aa12.18□□□□□ -0.46
FOXN3-204ENST00000553840 PSG8Q9UQ74 426 aa12.18□□□□□ -0.46
FOXN3-204ENST00000553840 A0A1W2PRE2 83 aa12.17□□□□□ -0.46
FOXN3-204ENST00000553840 C16orf90A8MZG2 172 aa12.17□□□□□ -0.46
FOXN3-204ENST00000553840 C9JCJ5 164 aa12.17□□□□□ -0.46
FOXN3-204ENST00000553840 SAPCD1Q5SSQ6 148 aa12.17□□□□□ -0.46
FOXN3-204ENST00000553840 AKR1C8PQ5T2L2 129 aa12.17□□□□□ -0.46
FOXN3-204ENST00000553840 TXNDC17Q9BRA2 123 aa12.17□□□□□ -0.46
FOXN3-204ENST00000553840 DNAH17Q9UFH2 4485 aa12.17□□□□□ -0.46
FOXN3-204ENST00000553840 TRAV9-2A0A087WT02 112 aa12.16□□□□□ -0.46
FOXN3-204ENST00000553840 CTXND1A0A1B0GTU2 59 aa12.16□□□□□ -0.46
FOXN3-204ENST00000553840 K7EQD1 137 aa12.16□□□□□ -0.46
FOXN3-204ENST00000553840 GCGP01275 180 aa12.16□□□□□ -0.46
FOXN3-204ENST00000553840 GYPEP15421 78 aa12.16□□□□□ -0.46
FOXN3-204ENST00000553840 SMUG1Q53HV7 270 aa12.16□□□□□ -0.46
FOXN3-204ENST00000553840 PRNTQ86SH4 94 aa12.16□□□□□ -0.46
FOXN3-204ENST00000553840 TMEM75Q8N9X5 138 aa12.16□□□□□ -0.46
FOXN3-204ENST00000553840 GGTLC3B5MD39 225 aa12.15□□□□□ -0.46
FOXN3-204ENST00000553840 PFN1P07737 140 aaKnown RBP12.15□□□□□ -0.46
FOXN3-204ENST00000553840 PPT1P50897 306 aa12.15□□□□□ -0.46
FOXN3-204ENST00000553840 LGALSLQ3ZCW2 172 aaPredicted RBP12.15□□□□□ -0.46
FOXN3-204ENST00000553840 NKX6-2Q9C056 277 aaPredicted RBP12.15□□□□□ -0.46
FOXN3-204ENST00000553840 CIDEAO60543 219 aa12.14□□□□□ -0.47
FOXN3-204ENST00000553840 IFNA7P01567 189 aa12.14□□□□□ -0.47
FOXN3-204ENST00000553840 EIF5AP63241 154 aaKnown RBP12.14□□□□□ -0.47
FOXN3-204ENST00000553840 SH2D6Q7Z4S9 175 aa12.14□□□□□ -0.47
FOXN3-204ENST00000553840 IGLV2-11P01706 119 aa12.13□□□□□ -0.47
FOXN3-204ENST00000553840 ZNF80P51504 273 aaPredicted RBP12.13□□□□□ -0.47
FOXN3-204ENST00000553840 LINC00315P59091 139 aa12.13□□□□□ -0.47
FOXN3-204ENST00000553840 ZNF876PQ49A33 203 aa12.13□□□□□ -0.47
FOXN3-204ENST00000553840 LY96Q9Y6Y9 160 aa12.13□□□□□ -0.47
FOXN3-204ENST00000553840 PKHD1P08F94 4074 aa12.13□□□□□ -0.47
FOXN3-204ENST00000553840 K7EP13 123 aa12.12□□□□□ -0.47
FOXN3-204ENST00000553840 PKD1P98161 4303 aa12.12□□□□□ -0.47
FOXN3-204ENST00000553840 SEC11BP0C7V7 166 aa12.11□□□□□ -0.47
FOXN3-204ENST00000553840 TPT1P13693 172 aaKnown RBP12.11□□□□□ -0.47
FOXN3-204ENST00000553840 UBE2G2P60604 165 aa12.11□□□□□ -0.47
FOXN3-204ENST00000553840 ZNF726P1Q15940 193 aa12.11□□□□□ -0.47
FOXN3-204ENST00000553840 LCE2DQ5TA82 110 aaPredicted RBP12.11□□□□□ -0.47
FOXN3-204ENST00000553840 SPATA12Q7Z6I5 190 aa12.11□□□□□ -0.47
FOXN3-204ENST00000553840 NFE4Q86UQ8 179 aa12.11□□□□□ -0.47
FOXN3-204ENST00000553840 NHLRC2Q8NBF2 726 aa12.11□□□□□ -0.47
FOXN3-204ENST00000553840 HIST1H2BAQ96A08 127 aa12.11□□□□□ -0.47
FOXN3-204ENST00000553840 EVI2AP22794 236 aa12.1□□□□□ -0.47
FOXN3-204ENST00000553840 STOML3Q8TAV4 291 aa12.1□□□□□ -0.47
FOXN3-204ENST00000553840 C11orf21Q9P2W6 132 aa12.1□□□□□ -0.47
FOXN3-204ENST00000553840 TRAV34A0A0B4J273 112 aa12.09□□□□□ -0.47
FOXN3-204ENST00000553840 MAP1LC3B2A6NCE7 125 aa12.09□□□□□ -0.47
FOXN3-204ENST00000553840 FABP5P3A8MUU1 101 aa12.09□□□□□ -0.47
FOXN3-204ENST00000553840 EREGO14944 169 aa12.09□□□□□ -0.47
FOXN3-204ENST00000553840 GATA1P15976 413 aaPredicted RBP12.09□□□□□ -0.47
FOXN3-204ENST00000553840 FGF8P55075 233 aaPredicted RBP12.09□□□□□ -0.47
FOXN3-204ENST00000553840 PTH2Q96A98 100 aa12.09□□□□□ -0.47
FOXN3-204ENST00000553840 C9orf85Q96MD7 179 aa12.09□□□□□ -0.47
FOXN3-204ENST00000553840 PRADC1Q9BSG0 188 aa12.09□□□□□ -0.47
FOXN3-204ENST00000553840 MAP1LC3BQ9GZQ8 125 aa12.09□□□□□ -0.47
FOXN3-204ENST00000553840 ARL2-SNX15V9GYD0 113 aa12.09□□□□□ -0.47
FOXN3-204ENST00000553840 HERC2O95714 4834 aa12.09□□□□□ -0.47
FOXN3-204ENST00000553840 FAM74A7A6NL05 159 aa12.08□□□□□ -0.48
FOXN3-204ENST00000553840 PEX7O00628 323 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms