RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 ATP5LO75964 103 aa9.49□□□□□ -0.89
SHMT2-207ENST00000553837 GTSCR1Q86UQ5 136 aa9.49□□□□□ -0.89
SHMT2-207ENST00000553837 A0A1B0GWB2 263 aa9.48□□□□□ -0.89
SHMT2-207ENST00000553837 SMKR1H3BMG3 65 aa9.48□□□□□ -0.89
SHMT2-207ENST00000553837 IL4P05112 153 aa9.48□□□□□ -0.89
SHMT2-207ENST00000553837 TWIST1Q15672 202 aa9.48□□□□□ -0.89
SHMT2-207ENST00000553837 RRN3P1Q2M238 152 aa9.48□□□□□ -0.89
SHMT2-207ENST00000553837 AJUBAQ96IF1 538 aa9.48□□□□□ -0.89
SHMT2-207ENST00000553837 TMSB15BA0A087X1C1 80 aa9.48□□□□□ -0.89
SHMT2-207ENST00000553837 NCBP2LA6PVI3 153 aaKnown RBP9.48□□□□□ -0.89
SHMT2-207ENST00000553837 FABP5P3A8MUU1 101 aa9.48□□□□□ -0.89
SHMT2-207ENST00000553837 IGHV3-23P01764 117 aa9.48□□□□□ -0.89
SHMT2-207ENST00000553837 EGR2P11161 476 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-207ENST00000553837 INSL3P51460 131 aa9.48□□□□□ -0.89
SHMT2-207ENST00000553837 ZC2HC1BQ5TFG8 222 aa9.48□□□□□ -0.89
SHMT2-207ENST00000553837 AMTNQ6UX39 209 aa9.48□□□□□ -0.89
SHMT2-207ENST00000553837 SIGLEC15Q6ZMC9 328 aa9.48□□□□□ -0.89
SHMT2-207ENST00000553837 RNF125Q96EQ8 232 aa9.48□□□□□ -0.89
SHMT2-207ENST00000553837 CITED1Q99966 193 aa9.48□□□□□ -0.89
SHMT2-207ENST00000553837 CITED2Q99967 270 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-207ENST00000553837 SIRPDQ9H106 197 aa9.48□□□□□ -0.89
SHMT2-207ENST00000553837 NXT2Q9NPJ8 142 aaKnown RBP9.48□□□□□ -0.89
SHMT2-207ENST00000553837 A0A087WX48 190 aa9.47□□□□□ -0.89
SHMT2-207ENST00000553837 CENPVL3A0A0U1RRI6 287 aa9.47□□□□□ -0.89
SHMT2-207ENST00000553837 C8orf49Q96NF6 230 aa9.47□□□□□ -0.89
SHMT2-207ENST00000553837 HIST1H4GQ99525 98 aa9.47□□□□□ -0.89
SHMT2-207ENST00000553837 C19orf84I3L1E1 186 aa9.47□□□□□ -0.89
SHMT2-207ENST00000553837 SH2D1AO60880 128 aa9.47□□□□□ -0.89
SHMT2-207ENST00000553837 SRD5A1P18405 259 aa9.47□□□□□ -0.89
SHMT2-207ENST00000553837 ID1P41134 155 aa9.47□□□□□ -0.89
SHMT2-207ENST00000553837 C5orf47Q569G3 176 aa9.47□□□□□ -0.89
SHMT2-207ENST00000553837 FOXC2Q99958 501 aa9.47□□□□□ -0.89
SHMT2-207ENST00000553837 UBTD1Q9HAC8 227 aa9.47□□□□□ -0.89
SHMT2-207ENST00000553837 AKAP6Q13023 2319 aa9.46□□□□□ -0.89
SHMT2-207ENST00000553837 TMEM262E9PQX1 116 aa9.46□□□□□ -0.89
SHMT2-207ENST00000553837 EBI3Q14213 229 aa9.46□□□□□ -0.89
SHMT2-207ENST00000553837 K7EMI3 77 aa9.46□□□□□ -0.9
SHMT2-207ENST00000553837 M0R3E3 92 aa9.46□□□□□ -0.9
SHMT2-207ENST00000553837 NHLRC4P0CG21 123 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-207ENST00000553837 PF4V1P10720 104 aa9.46□□□□□ -0.9
SHMT2-207ENST00000553837 IGHV7-81A0A0B4J1V7 117 aa9.45□□□□□ -0.9
SHMT2-207ENST00000553837 MAPKAPK5-AS1Q8N8E1 139 aa9.45□□□□□ -0.9
SHMT2-207ENST00000553837 TMEM160Q9NX00 188 aa9.45□□□□□ -0.9
SHMT2-207ENST00000553837 VPREB3Q9UKI3 123 aa9.45□□□□□ -0.9
SHMT2-207ENST00000553837 RHODO00212 210 aa9.44□□□□□ -0.9
SHMT2-207ENST00000553837 MFAP4P55083 255 aa9.44□□□□□ -0.9
SHMT2-207ENST00000553837 Q8N9W7 124 aa9.44□□□□□ -0.9
SHMT2-207ENST00000553837 ITLN2Q8WWU7 325 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-207ENST00000553837 AAMDCQ9H7C9 122 aa9.44□□□□□ -0.9
SHMT2-207ENST00000553837 TRAV40A0A0B4J280 105 aa9.44□□□□□ -0.9
SHMT2-207ENST00000553837 PRSS29PA6NIE9 313 aa9.44□□□□□ -0.9
SHMT2-207ENST00000553837 LINC01619G3V211 115 aa9.44□□□□□ -0.9
SHMT2-207ENST00000553837 HOXA3O43365 443 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-207ENST00000553837 MINOS1Q5TGZ0 78 aa9.44□□□□□ -0.9
SHMT2-207ENST00000553837 COX8CQ7Z4L0 72 aa9.44□□□□□ -0.9
SHMT2-207ENST00000553837 PPDPFLQ8WWR9 84 aa9.44□□□□□ -0.9
SHMT2-207ENST00000553837 C21orf62Q9NYP8 219 aa9.44□□□□□ -0.9
SHMT2-207ENST00000553837 MINOS1-NBL1R4GNA1 71 aa9.44□□□□□ -0.9
SHMT2-207ENST00000553837 TNFRSF6BO95407 300 aa9.43□□□□□ -0.9
SHMT2-207ENST00000553837 LMO4P61968 165 aa9.43□□□□□ -0.9
SHMT2-207ENST00000553837 MYOZ3Q8TDC0 251 aa9.43□□□□□ -0.9
SHMT2-207ENST00000553837 TMEM158Q8WZ71 300 aa9.43□□□□□ -0.9
SHMT2-207ENST00000553837 RNF185Q96GF1 192 aa9.43□□□□□ -0.9
SHMT2-207ENST00000553837 TMEM126AQ9H061 195 aa9.43□□□□□ -0.9
SHMT2-207ENST00000553837 PRORYQ9H606 182 aa9.43□□□□□ -0.9
SHMT2-207ENST00000553837 CELSR1Q9NYQ6 3014 aa9.43□□□□□ -0.9
SHMT2-207ENST00000553837 IGHV3OR16-8A0A075B7F1 116 aa9.43□□□□□ -0.9
SHMT2-207ENST00000553837 OOSP1A8MZH6 123 aa9.43□□□□□ -0.9
SHMT2-207ENST00000553837 CTSGP08311 255 aa9.43□□□□□ -0.9
SHMT2-207ENST00000553837 NDUFV3P56181 108 aaKnown RBP9.43□□□□□ -0.9
SHMT2-207ENST00000553837 BPESC1Q9GZL8 116 aa9.43□□□□□ -0.9
SHMT2-207ENST00000553837 TRBV7-3A0A075B6L6 115 aa9.42□□□□□ -0.9
SHMT2-207ENST00000553837 WIPF1O43516 503 aa9.42□□□□□ -0.9
SHMT2-207ENST00000553837 IGLC6P0CF74 106 aa9.42□□□□□ -0.9
SHMT2-207ENST00000553837 EFNA4P52798 201 aa9.42□□□□□ -0.9
SHMT2-207ENST00000553837 PDE6HQ13956 83 aa9.42□□□□□ -0.9
SHMT2-207ENST00000553837 CFAP126Q5VTH2 177 aa9.42□□□□□ -0.9
SHMT2-207ENST00000553837 Q6Q795 121 aa9.42□□□□□ -0.9
SHMT2-207ENST00000553837 Q8N8P6 123 aa9.42□□□□□ -0.9
SHMT2-207ENST00000553837 DLX4Q92988 240 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-207ENST00000553837 PTH2Q96A98 100 aa9.42□□□□□ -0.9
SHMT2-207ENST00000553837 MRPL35Q9NZE8 188 aaKnown RBP9.42□□□□□ -0.9
SHMT2-207ENST00000553837 IGHV3-35A0A0C4DH35 117 aa9.41□□□□□ -0.9
SHMT2-207ENST00000553837 LINC01548A6NM66 108 aa9.41□□□□□ -0.9
SHMT2-207ENST00000553837 GNLYP22749 145 aa9.41□□□□□ -0.9
SHMT2-207ENST00000553837 PLNP26678 52 aa9.41□□□□□ -0.9
SHMT2-207ENST00000553837 CACNA1BQ00975 2339 aa9.41□□□□□ -0.9
SHMT2-207ENST00000553837 PPIFP30405 207 aaKnown RBP9.41□□□□□ -0.9
SHMT2-207ENST00000553837 SAA4P35542 130 aa9.41□□□□□ -0.9
SHMT2-207ENST00000553837 SRSF2Q01130 221 aaKnown RBP9.41□□□□□ -0.9
SHMT2-207ENST00000553837 FHL3Q13643 280 aa9.41□□□□□ -0.9
SHMT2-207ENST00000553837 SMAD5-AS1Q9Y6J3 95 aa9.41□□□□□ -0.9
SHMT2-207ENST00000553837 UBE2E1P51965 193 aa9.4□□□□□ -0.9
SHMT2-207ENST00000553837 IGFL4Q6B9Z1 124 aa9.4□□□□□ -0.9
SHMT2-207ENST00000553837 PRR25Q96S07 402 aa9.4□□□□□ -0.9
SHMT2-207ENST00000553837 COL12A1Q99715 3063 aa9.4□□□□□ -0.9
SHMT2-207ENST00000553837 HLA-DMBP28068 263 aa9.4□□□□□ -0.91
SHMT2-207ENST00000553837 ATP5J2P56134 94 aa9.4□□□□□ -0.91
SHMT2-207ENST00000553837 GAGE2BQ13066 116 aa9.4□□□□□ -0.91
SHMT2-207ENST00000553837 GAGE2EQ4V326 116 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms