RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 RPL35P42766 123 aaKnown RBP16.67■□□□□ 0.26
TDP1-205ENST00000553527 SMUG1Q53HV7 270 aa16.67■□□□□ 0.26
TDP1-205ENST00000553527 Q6AWC8 147 aa16.67■□□□□ 0.26
TDP1-205ENST00000553527 FAM210BQ96KR6 192 aa16.67■□□□□ 0.26
TDP1-205ENST00000553527 ZFP30Q9Y2G7 519 aa16.67■□□□□ 0.26
TDP1-205ENST00000553527 VPS13DQ5THJ4 4388 aa16.66■□□□□ 0.26
TDP1-205ENST00000553527 ZNF324O75467 553 aaPredicted RBP16.66■□□□□ 0.26
TDP1-205ENST00000553527 LTAP01374 205 aa16.66■□□□□ 0.26
TDP1-205ENST00000553527 Q6ZQT7 251 aa16.66■□□□□ 0.26
TDP1-205ENST00000553527 DERL1Q9BUN8 251 aa16.66■□□□□ 0.26
TDP1-205ENST00000553527 TRAV21A0A0B4J279 112 aa16.65■□□□□ 0.26
TDP1-205ENST00000553527 CBY3A6NI87 242 aa16.65■□□□□ 0.26
TDP1-205ENST00000553527 GCGP01275 180 aa16.65■□□□□ 0.26
TDP1-205ENST00000553527 P0DMU3 169 aa16.65■□□□□ 0.26
TDP1-205ENST00000553527 FAM231AP0DMU4 169 aa16.65■□□□□ 0.26
TDP1-205ENST00000553527 FAM231CP0DMU5 169 aa16.65■□□□□ 0.26
TDP1-205ENST00000553527 GAGE12BA1L429 117 aa16.64■□□□□ 0.25
TDP1-205ENST00000553527 RGS13O14921 159 aa16.64■□□□□ 0.25
TDP1-205ENST00000553527 GAGE7O76087 117 aa16.64■□□□□ 0.25
TDP1-205ENST00000553527 ATP5G1P05496 136 aa16.64■□□□□ 0.25
TDP1-205ENST00000553527 GAGE12FP0CL80 117 aa16.64■□□□□ 0.25
TDP1-205ENST00000553527 GAGE12GP0CL81 117 aa16.64■□□□□ 0.25
TDP1-205ENST00000553527 GAGE12IP0CL82 117 aa16.64■□□□□ 0.25
TDP1-205ENST00000553527 TMEM250H0YL14 139 aa16.63■□□□□ 0.25
TDP1-205ENST00000553527 CLLU1Q5K131 121 aa16.63■□□□□ 0.25
TDP1-205ENST00000553527 UBE2DNLQ8IWF7 75 aa16.63■□□□□ 0.25
TDP1-205ENST00000553527 EIF4E3Q8N5X7 224 aaKnown RBP16.63■□□□□ 0.25
TDP1-205ENST00000553527 GSN-AS1Q9NRJ2 163 aa16.63■□□□□ 0.25
TDP1-205ENST00000553527 NAGKQ9UJ70 344 aa16.63■□□□□ 0.25
TDP1-205ENST00000553527 ZNF80P51504 273 aaPredicted RBP16.62■□□□□ 0.25
TDP1-205ENST00000553527 CENPWQ5EE01 88 aa16.62■□□□□ 0.25
TDP1-205ENST00000553527 BAGE2Q86Y30 109 aa16.62■□□□□ 0.25
TDP1-205ENST00000553527 TMEM183AQ8IXX5 376 aa16.62■□□□□ 0.25
TDP1-205ENST00000553527 POM121L12Q8N7R1 296 aa16.62■□□□□ 0.25
TDP1-205ENST00000553527 NHLRC2Q8NBF2 726 aa16.62■□□□□ 0.25
TDP1-205ENST00000553527 ZC2HC1AQ96GY0 325 aa16.62■□□□□ 0.25
TDP1-205ENST00000553527 IGHV1OR15-1A0A075B7D0 117 aa16.61■□□□□ 0.25
TDP1-205ENST00000553527 PFN1P07737 140 aaKnown RBP16.61■□□□□ 0.25
TDP1-205ENST00000553527 CEBPGP53567 150 aa16.61■□□□□ 0.25
TDP1-205ENST00000553527 MUC21Q5SSG8 566 aa16.61■□□□□ 0.25
TDP1-205ENST00000553527 LINC00467Q9BRT7 94 aa16.61■□□□□ 0.25
TDP1-205ENST00000553527 TP53TG3Q9ULZ0 132 aa16.61■□□□□ 0.25
TDP1-205ENST00000553527 NDUFS6O75380 124 aaKnown RBP16.6■□□□□ 0.25
TDP1-205ENST00000553527 GNG4P50150 75 aa16.6■□□□□ 0.25
TDP1-205ENST00000553527 OR5I1Q13606 314 aa16.6■□□□□ 0.25
TDP1-205ENST00000553527 FAM159AQ6UWV7 190 aa16.6■□□□□ 0.25
TDP1-205ENST00000553527 COX8CQ7Z4L0 72 aa16.6■□□□□ 0.25
TDP1-205ENST00000553527 RAB19A4D1S5 217 aa16.59■□□□□ 0.25
TDP1-205ENST00000553527 NUDT3O95989 172 aa16.59■□□□□ 0.25
TDP1-205ENST00000553527 PEA15Q15121 130 aa16.59■□□□□ 0.25
TDP1-205ENST00000553527 ZNF674Q2M3X9 581 aa16.59■□□□□ 0.25
TDP1-205ENST00000553527 Q6ZTI0 123 aa16.59■□□□□ 0.25
TDP1-205ENST00000553527 PARLQ9H300 379 aa16.59■□□□□ 0.25
TDP1-205ENST00000553527 EPPK1P58107 5090 aaKnown RBP16.58■□□□□ 0.25
TDP1-205ENST00000553527 ANXA2RQ3ZCQ2 193 aa16.58■□□□□ 0.24
TDP1-205ENST00000553527 C11orf72Q8NBR9 251 aa16.58■□□□□ 0.24
TDP1-205ENST00000553527 FABP5P3A8MUU1 101 aa16.57■□□□□ 0.24
TDP1-205ENST00000553527 SRP19P09132 144 aaKnown RBP16.57■□□□□ 0.24
TDP1-205ENST00000553527 DAZ2Q13117 558 aaKnown RBP16.57■□□□□ 0.24
TDP1-205ENST00000553527 FAM162BQ5T6X4 162 aa16.57■□□□□ 0.24
TDP1-205ENST00000553527 C15orf53Q8NAA6 179 aa16.57■□□□□ 0.24
TDP1-205ENST00000553527 MLST8Q9BVC4 326 aa16.57■□□□□ 0.24
TDP1-205ENST00000553527 TRGV1A0A0A0MS02 117 aa16.56■□□□□ 0.24
TDP1-205ENST00000553527 M0R2N4 97 aa16.56■□□□□ 0.24
TDP1-205ENST00000553527 LINC00612Q8N6U2 182 aa16.56■□□□□ 0.24
TDP1-205ENST00000553527 SMIM12Q96EX1 92 aa16.56■□□□□ 0.24
TDP1-205ENST00000553527 KCNS1Q96KK3 526 aa16.56■□□□□ 0.24
TDP1-205ENST00000553527 SMDT1Q9H4I9 107 aa16.56■□□□□ 0.24
TDP1-205ENST00000553527 TRBV20OR9-2A0A075B6H5 130 aa16.55■□□□□ 0.24
TDP1-205ENST00000553527 TRGV11A0A075B6L2 103 aa16.55■□□□□ 0.24
TDP1-205ENST00000553527 C9JCJ5 164 aa16.55■□□□□ 0.24
TDP1-205ENST00000553527 SH2D1AO60880 128 aa16.55■□□□□ 0.24
TDP1-205ENST00000553527 MGST1P10620 155 aaKnown RBP16.55■□□□□ 0.24
TDP1-205ENST00000553527 SRSF3P84103 164 aaKnown RBP16.55■□□□□ 0.24
TDP1-205ENST00000553527 TDRG1Q3Y452 100 aa16.55■□□□□ 0.24
TDP1-205ENST00000553527 PRR27Q6MZM9 219 aa16.55■□□□□ 0.24
TDP1-205ENST00000553527 SDF2L1Q9HCN8 221 aa16.55■□□□□ 0.24
TDP1-205ENST00000553527 NACAE9PAV3 2078 aa16.54■□□□□ 0.24
TDP1-205ENST00000553527 IGLV2-18A0A075B6J9 118 aa16.54■□□□□ 0.24
TDP1-205ENST00000553527 TRGV2A0A075B6R0 118 aa16.54■□□□□ 0.24
TDP1-205ENST00000553527 A0A0J9YY99 117 aa16.54■□□□□ 0.24
TDP1-205ENST00000553527 CRIP1P50238 77 aa16.54■□□□□ 0.24
TDP1-205ENST00000553527 C11orf21Q9P2W6 132 aa16.54■□□□□ 0.24
TDP1-205ENST00000553527 PGPEP1LA6NFU8 196 aa16.53■□□□□ 0.24
TDP1-205ENST00000553527 HOXA5P20719 270 aa16.53■□□□□ 0.24
TDP1-205ENST00000553527 TCL1AP56279 114 aa16.53■□□□□ 0.24
TDP1-205ENST00000553527 ZNF415Q09FC8 603 aa16.53■□□□□ 0.24
TDP1-205ENST00000553527 SMIM7Q9BQ49 75 aa16.53■□□□□ 0.24
TDP1-205ENST00000553527 TRAV26-1A0A087WT03 109 aa16.52■□□□□ 0.24
TDP1-205ENST00000553527 C9JQL5 133 aa16.52■□□□□ 0.24
TDP1-205ENST00000553527 IGLV2-8P01709 118 aa16.52■□□□□ 0.24
TDP1-205ENST00000553527 TYMSP04818 313 aa16.52■□□□□ 0.24
TDP1-205ENST00000553527 IBA57Q5T440 356 aaKnown RBP16.52■□□□□ 0.24
TDP1-205ENST00000553527 ORM1P02763 201 aa16.51■□□□□ 0.23
TDP1-205ENST00000553527 RNF212Q495C1 297 aa16.51■□□□□ 0.23
TDP1-205ENST00000553527 MRPL16Q9NX20 251 aaKnown RBP16.51■□□□□ 0.23
TDP1-205ENST00000553527 MDFICQ9P1T7 246 aa16.51■□□□□ 0.23
TDP1-205ENST00000553527 FRAS1Q86XX4 4008 aa16.51■□□□□ 0.23
TDP1-205ENST00000553527 DNAH6Q9C0G6 4158 aa16.5■□□□□ 0.23
TDP1-205ENST00000553527 ZNF727A8MUV8 499 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms