RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 ZNF575Q86XF7 245 aa5.48□□□□□ -1.53
ATXN3-221ENST00000553498 DEFB125Q8N687 156 aa5.48□□□□□ -1.53
ATXN3-221ENST00000553498 OR11H1Q8NG94 326 aa5.48□□□□□ -1.53
ATXN3-221ENST00000553498 KRTAP4-5Q9BYR2 181 aa5.48□□□□□ -1.53
ATXN3-221ENST00000553498 NAGKQ9UJ70 344 aa5.48□□□□□ -1.53
ATXN3-221ENST00000553498 TSSC4Q9Y5U2 329 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-221ENST00000553498 ABCA2Q9BZC7 2435 aa5.47□□□□□ -1.53
ATXN3-221ENST00000553498 A0A0J9YX75 114 aa5.47□□□□□ -1.53
ATXN3-221ENST00000553498 OR4C46A6NHA9 309 aa5.47□□□□□ -1.53
ATXN3-221ENST00000553498 M0R2Z0 102 aa5.47□□□□□ -1.53
ATXN3-221ENST00000553498 SCGB1D1O95968 90 aa5.47□□□□□ -1.53
ATXN3-221ENST00000553498 PPP1R17O96001 155 aa5.47□□□□□ -1.53
ATXN3-221ENST00000553498 PMCHL1Q16048 86 aa5.47□□□□□ -1.53
ATXN3-221ENST00000553498 RNASEKQ6P5S7 137 aaKnown RBP5.47□□□□□ -1.53
ATXN3-221ENST00000553498 FAM159AQ6UWV7 190 aa5.47□□□□□ -1.53
ATXN3-221ENST00000553498 Q6ZWC4 215 aa5.47□□□□□ -1.53
ATXN3-221ENST00000553498 Q71RC1 249 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-221ENST00000553498 KLHL30-AS1Q8NEE0 82 aa5.47□□□□□ -1.53
ATXN3-221ENST00000553498 PRELID3AQ96N28 172 aa5.47□□□□□ -1.53
ATXN3-221ENST00000553498 RCHY1Q96PM5 261 aa5.47□□□□□ -1.53
ATXN3-221ENST00000553498 SPAG8Q99932 426 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-221ENST00000553498 SCRT2Q9NQ03 307 aa5.47□□□□□ -1.53
ATXN3-221ENST00000553498 ESM1Q9NQ30 184 aa5.47□□□□□ -1.53
ATXN3-221ENST00000553498 HSPB8Q9UJY1 196 aa5.47□□□□□ -1.53
ATXN3-221ENST00000553498 PRRC2AP48634 2157 aaKnown RBP5.47□□□□□ -1.53
ATXN3-221ENST00000553498 USP9YO00507 2555 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-221ENST00000553498 VPS13CQ709C8 3753 aa5.46□□□□□ -1.53
ATXN3-221ENST00000553498 A0A1B0GUS0 222 aa5.46□□□□□ -1.54
ATXN3-221ENST00000553498 C7orf71A4D174 169 aa5.46□□□□□ -1.54
ATXN3-221ENST00000553498 PRSS47A8MTI9 375 aa5.46□□□□□ -1.54
ATXN3-221ENST00000553498 A8MTW9 85 aa5.46□□□□□ -1.54
ATXN3-221ENST00000553498 K7EMI3 77 aa5.46□□□□□ -1.54
ATXN3-221ENST00000553498 TCF21O43680 179 aa5.46□□□□□ -1.54
ATXN3-221ENST00000553498 NXPH4O95158 308 aa5.46□□□□□ -1.54
ATXN3-221ENST00000553498 S100A4P26447 101 aaKnown RBP5.46□□□□□ -1.54
ATXN3-221ENST00000553498 CKS2P33552 79 aa5.46□□□□□ -1.54
ATXN3-221ENST00000553498 CDKN1BP46527 198 aa5.46□□□□□ -1.54
ATXN3-221ENST00000553498 PSMG4Q5JS54 123 aa5.46□□□□□ -1.54
ATXN3-221ENST00000553498 SPANXN1Q5VSR9 72 aa5.46□□□□□ -1.54
ATXN3-221ENST00000553498 FA2HQ7L5A8 372 aa5.46□□□□□ -1.54
ATXN3-221ENST00000553498 OR2K2Q8NGT1 345 aa5.46□□□□□ -1.54
ATXN3-221ENST00000553498 PRSS3P2Q8NHM4 247 aa5.46□□□□□ -1.54
ATXN3-221ENST00000553498 LINC01006Q8NI28 216 aa5.46□□□□□ -1.54
ATXN3-221ENST00000553498 MRAP2Q96G30 205 aa5.46□□□□□ -1.54
ATXN3-221ENST00000553498 DUX5Q96PT3 197 aa5.46□□□□□ -1.54
ATXN3-221ENST00000553498 NXT2Q9NPJ8 142 aaKnown RBP5.46□□□□□ -1.54
ATXN3-221ENST00000553498 C11orf21Q9P2W6 132 aa5.46□□□□□ -1.54
ATXN3-221ENST00000553498 CELSR2Q9HCU4 2923 aa5.46□□□□□ -1.54
ATXN3-221ENST00000553498 SPTAN1Q13813 2472 aaKnown RBP5.46□□□□□ -1.54
ATXN3-221ENST00000553498 CSMD2Q7Z408 3487 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 IGKV3-7A0A075B6H7 116 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 C20orf202A1L168 122 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 LINC01546A6NGU7 62 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 PCP4L1A6NKN8 68 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 D6R8Y8 96 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 CRXO43186 299 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-221ENST00000553498 LEPROTL1O95214 131 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 CSN3P07498 182 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 ZNF688P0C7X2 276 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 BTF3P20290 206 aaKnown RBP5.45□□□□□ -1.54
ATXN3-221ENST00000553498 RNASE4P34096 147 aaKnown RBP5.45□□□□□ -1.54
ATXN3-221ENST00000553498 MRPL51Q4U2R6 128 aaKnown RBP5.45□□□□□ -1.54
ATXN3-221ENST00000553498 KHDC1LQ5JSQ8 128 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 TEX43Q6ZNM6 134 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 AMN1Q8IY45 258 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 OR10AG1Q8NH19 301 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 DYNLRB2Q8TF09 96 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 C20orf144Q9BQM9 153 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 MAP1LC3AQ9H492 121 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 PHLDA3Q9Y5J5 127 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 FAM208BQ5VWN6 2430 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 SVEP1Q4LDE5 3571 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 AKAP6Q13023 2319 aa5.45□□□□□ -1.54
ATXN3-221ENST00000553498 UTP20O75691 2785 aaKnown RBP5.44□□□□□ -1.54
ATXN3-221ENST00000553498 TRGV11A0A075B6L2 103 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 IGHV1-24A0A0C4DH33 117 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 F6UB75 175 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 M0R381 172 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 CCL24O00175 119 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 ZNF705DP0CH99 300 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-221ENST00000553498 ZNF705BP0CI00 300 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-221ENST00000553498 HLA-DRB4P13762 266 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 KRTDAPP60985 99 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 DEFB114Q30KQ6 69 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 ANXA2RQ3ZCQ2 193 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 PIK3CD-AS1Q5SR53 167 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 PRR9Q5T870 116 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 TENM4Q6N022 2769 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 PET117Q6UWS5 81 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 ADAMTSL5Q6ZMM2 481 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 SPATA12Q7Z6I5 190 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 DLX4Q92988 240 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-221ENST00000553498 RNF185Q96GF1 192 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 URB1-AS1Q96HZ7 61 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 AP1S3Q96PC3 154 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 FAM110AQ9BQ89 295 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 LINC00467Q9BRT7 94 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 TMEM70Q9BUB7 260 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 MAP1LC3CQ9BXW4 147 aa5.44□□□□□ -1.54
ATXN3-221ENST00000553498 ZMAT4Q9H898 229 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms