RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 Q5VSD8 79 aa6.77□□□□□ -1.33
ACTN1-208ENST00000553370 LYPD5Q6UWN5 251 aa6.77□□□□□ -1.33
ACTN1-208ENST00000553370 Q6ZRN7 208 aaPredicted RBP6.77□□□□□ -1.33
ACTN1-208ENST00000553370 TMEM183AQ8IXX5 376 aa6.77□□□□□ -1.33
ACTN1-208ENST00000553370 OR5C1Q8NGR4 320 aa6.77□□□□□ -1.33
ACTN1-208ENST00000553370 CMTM2Q8TAZ6 248 aa6.77□□□□□ -1.33
ACTN1-208ENST00000553370 SDHCQ99643 169 aaPredicted RBP6.77□□□□□ -1.33
ACTN1-208ENST00000553370 ZNF492Q9P255 531 aa6.77□□□□□ -1.33
ACTN1-208ENST00000553370 PGPEP1LA6NFU8 196 aa6.76□□□□□ -1.33
ACTN1-208ENST00000553370 CRYGDP07320 174 aa6.76□□□□□ -1.33
ACTN1-208ENST00000553370 RANP62826 216 aaKnown RBP6.76□□□□□ -1.33
ACTN1-208ENST00000553370 LRRC37A5PQ49AS3 106 aa6.76□□□□□ -1.33
ACTN1-208ENST00000553370 C10orf126Q8N4M7 172 aa6.76□□□□□ -1.33
ACTN1-208ENST00000553370 ZFAND2AQ8N6M9 145 aa6.76□□□□□ -1.33
ACTN1-208ENST00000553370 PHYHIPLQ96FC7 376 aa6.76□□□□□ -1.33
ACTN1-208ENST00000553370 FAM19A4Q96LR4 140 aa6.76□□□□□ -1.33
ACTN1-208ENST00000553370 HYLS1Q96M11 299 aa6.76□□□□□ -1.33
ACTN1-208ENST00000553370 SPXQ9BT56 116 aa6.76□□□□□ -1.33
ACTN1-208ENST00000553370 TNFRSF18Q9Y5U5 241 aa6.76□□□□□ -1.33
ACTN1-208ENST00000553370 A0A087WTM6 91 aa6.75□□□□□ -1.33
ACTN1-208ENST00000553370 K7EQD1 137 aa6.75□□□□□ -1.33
ACTN1-208ENST00000553370 PLA2G10O15496 165 aa6.75□□□□□ -1.33
ACTN1-208ENST00000553370 TAS2R45P59539 299 aa6.75□□□□□ -1.33
ACTN1-208ENST00000553370 FHL2Q14192 279 aa6.75□□□□□ -1.33
ACTN1-208ENST00000553370 KHDC3LQ587J8 217 aa6.75□□□□□ -1.33
ACTN1-208ENST00000553370 FAM74A1Q5RGS3 127 aa6.75□□□□□ -1.33
ACTN1-208ENST00000553370 WFDC10BQ8IUB3 73 aa6.75□□□□□ -1.33
ACTN1-208ENST00000553370 OR4C5Q8NGB2 326 aa6.75□□□□□ -1.33
ACTN1-208ENST00000553370 ENKURQ8TC29 256 aa6.75□□□□□ -1.33
ACTN1-208ENST00000553370 ATP5SQ99766 215 aa6.75□□□□□ -1.33
ACTN1-208ENST00000553370 CCDC32Q9BV29 185 aa6.75□□□□□ -1.33
ACTN1-208ENST00000553370 IGLV5-52A0A0A0MRZ9 124 aa6.74□□□□□ -1.33
ACTN1-208ENST00000553370 TRBV7-9A0A0J9YWB2 115 aa6.74□□□□□ -1.33
ACTN1-208ENST00000553370 RBAKDNA6NC62 111 aa6.74□□□□□ -1.33
ACTN1-208ENST00000553370 K7EP13 123 aa6.74□□□□□ -1.33
ACTN1-208ENST00000553370 ZNF266Q14584 549 aa6.74□□□□□ -1.33
ACTN1-208ENST00000553370 FFAR4Q5NUL3 377 aa6.74□□□□□ -1.33
ACTN1-208ENST00000553370 Q6ZQT7 251 aa6.74□□□□□ -1.33
ACTN1-208ENST00000553370 SH2D6Q7Z4S9 175 aa6.74□□□□□ -1.33
ACTN1-208ENST00000553370 LYPD1Q8N2G4 141 aa6.74□□□□□ -1.33
ACTN1-208ENST00000553370 OR10G4Q8NGN3 311 aa6.74□□□□□ -1.33
ACTN1-208ENST00000553370 SCGB1C1Q8TD33 95 aa6.74□□□□□ -1.33
ACTN1-208ENST00000553370 FXYD5Q96DB9 178 aa6.74□□□□□ -1.33
ACTN1-208ENST00000553370 ZNF479Q96JC4 524 aa6.74□□□□□ -1.33
ACTN1-208ENST00000553370 NMES1Q9C002 83 aa6.74□□□□□ -1.33
ACTN1-208ENST00000553370 C11orf1Q9H5F2 150 aa6.74□□□□□ -1.33
ACTN1-208ENST00000553370 TRAV8-6A0A0B4J262 113 aa6.73□□□□□ -1.33
ACTN1-208ENST00000553370 TRAV4A0A0B4J268 109 aa6.73□□□□□ -1.33
ACTN1-208ENST00000553370 FAM167A-AS1Q96KT0 104 aa6.73□□□□□ -1.33
ACTN1-208ENST00000553370 WDR61Q9GZS3 305 aaKnown RBP6.73□□□□□ -1.33
ACTN1-208ENST00000553370 Q9HAA7 133 aa6.73□□□□□ -1.33
ACTN1-208ENST00000553370 MDFICQ9P1T7 246 aa6.73□□□□□ -1.33
ACTN1-208ENST00000553370 IGHV3-16A0A0C4DH30 117 aa6.72□□□□□ -1.33
ACTN1-208ENST00000553370 M0R2P5 195 aa6.72□□□□□ -1.33
ACTN1-208ENST00000553370 UPK1BO75841 260 aa6.72□□□□□ -1.33
ACTN1-208ENST00000553370 SIX6O95475 246 aa6.72□□□□□ -1.33
ACTN1-208ENST00000553370 SMR3BP02814 79 aaPredicted RBP6.72□□□□□ -1.33
ACTN1-208ENST00000553370 PET100P0DJ07 73 aa6.72□□□□□ -1.33
ACTN1-208ENST00000553370 KRTAP10-1P60331 282 aa6.72□□□□□ -1.33
ACTN1-208ENST00000553370 OR10J3Q5JRS4 329 aa6.72□□□□□ -1.33
ACTN1-208ENST00000553370 SYT8Q8NBV8 401 aa6.72□□□□□ -1.33
ACTN1-208ENST00000553370 NDFIP1Q9BT67 221 aa6.72□□□□□ -1.33
ACTN1-208ENST00000553370 SDF2L1Q9HCN8 221 aa6.72□□□□□ -1.33
ACTN1-208ENST00000553370 OR5AC2Q9NZP5 309 aa6.72□□□□□ -1.33
ACTN1-208ENST00000553370 HERC1Q15751 4861 aa6.72□□□□□ -1.33
ACTN1-208ENST00000553370 VPS13BQ7Z7G8 4022 aa6.71□□□□□ -1.33
ACTN1-208ENST00000553370 TRAV21A0A0B4J279 112 aa6.71□□□□□ -1.34
ACTN1-208ENST00000553370 IGHV3-38A0A0C4DH36 116 aa6.71□□□□□ -1.34
ACTN1-208ENST00000553370 A0A1W2PPV4 95 aa6.71□□□□□ -1.34
ACTN1-208ENST00000553370 GAGE12HA6NDE8 117 aa6.71□□□□□ -1.34
ACTN1-208ENST00000553370 FBLL1A6NHQ2 334 aaKnown RBP6.71□□□□□ -1.34
ACTN1-208ENST00000553370 F6UZH7 168 aa6.71□□□□□ -1.34
ACTN1-208ENST00000553370 PCP4P48539 62 aa6.71□□□□□ -1.34
ACTN1-208ENST00000553370 HAMPP81172 84 aa6.71□□□□□ -1.34
ACTN1-208ENST00000553370 CYCSP99999 105 aaKnown RBP6.71□□□□□ -1.34
ACTN1-208ENST00000553370 Q6AWC8 147 aa6.71□□□□□ -1.34
ACTN1-208ENST00000553370 Q6ZSN1 163 aa6.71□□□□□ -1.34
ACTN1-208ENST00000553370 GOLT1AQ6ZVE7 132 aa6.71□□□□□ -1.34
ACTN1-208ENST00000553370 IQCF2Q8IXL9 164 aa6.71□□□□□ -1.34
ACTN1-208ENST00000553370 RASL10AQ92737 203 aa6.71□□□□□ -1.34
ACTN1-208ENST00000553370 PRADC1Q9BSG0 188 aa6.71□□□□□ -1.34
ACTN1-208ENST00000553370 SMIM3Q9BZL3 60 aa6.71□□□□□ -1.34
ACTN1-208ENST00000553370 OTORQ9NRC9 128 aa6.71□□□□□ -1.34
ACTN1-208ENST00000553370 LENEPQ9Y5L5 61 aa6.71□□□□□ -1.34
ACTN1-208ENST00000553370 LOC100131303A0A0U1RQF7 123 aa6.7□□□□□ -1.34
ACTN1-208ENST00000553370 SSNA1O43805 119 aa6.7□□□□□ -1.34
ACTN1-208ENST00000553370 PFN1P07737 140 aaKnown RBP6.7□□□□□ -1.34
ACTN1-208ENST00000553370 XGP55808 180 aa6.7□□□□□ -1.34
ACTN1-208ENST00000553370 ZFP69Q49AA0 526 aa6.7□□□□□ -1.34
ACTN1-208ENST00000553370 NTN5Q8WTR8 489 aaPredicted RBP6.7□□□□□ -1.34
ACTN1-208ENST00000553370 ASB13Q8WXK3 278 aa6.7□□□□□ -1.34
ACTN1-208ENST00000553370 KCNS1Q96KK3 526 aa6.7□□□□□ -1.34
ACTN1-208ENST00000553370 TREM1Q9NP99 234 aa6.7□□□□□ -1.34
ACTN1-208ENST00000553370 PGPA6NDG6 321 aa6.69□□□□□ -1.34
ACTN1-208ENST00000553370 K7EQM0 130 aa6.69□□□□□ -1.34
ACTN1-208ENST00000553370 IGHV3-30P01768 117 aa6.69□□□□□ -1.34
ACTN1-208ENST00000553370 IGHV3-33P01772 117 aa6.69□□□□□ -1.34
ACTN1-208ENST00000553370 IGHV3-30-3P0DP02 117 aa6.69□□□□□ -1.34
ACTN1-208ENST00000553370 IGHV3-30-5P0DP03 117 aa6.69□□□□□ -1.34
ACTN1-208ENST00000553370 DEFA1P59665 94 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms