RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 UBR4Q5T4S7 5183 aa5.97□□□□□ -1.45
SYNE2-209ENST00000553308 IGHV3-73A0A0B4J1V6 119 aa5.97□□□□□ -1.45
SYNE2-209ENST00000553308 DIRC3C9JPN6 131 aa5.97□□□□□ -1.45
SYNE2-209ENST00000553308 RAB32Q13637 225 aa5.97□□□□□ -1.45
SYNE2-209ENST00000553308 RHOHQ15669 191 aa5.97□□□□□ -1.45
SYNE2-209ENST00000553308 C2orf50Q96LR7 162 aa5.97□□□□□ -1.45
SYNE2-209ENST00000553308 SEC22CQ9BRL7 303 aa5.97□□□□□ -1.45
SYNE2-209ENST00000553308 PRADC1Q9BSG0 188 aa5.97□□□□□ -1.45
SYNE2-209ENST00000553308 LENEPQ9Y5L5 61 aa5.97□□□□□ -1.45
SYNE2-209ENST00000553308 HMCN2Q8NDA2 5059 aa5.97□□□□□ -1.45
SYNE2-209ENST00000553308 CENPXA8MT69 81 aa5.96□□□□□ -1.46
SYNE2-209ENST00000553308 F6UZH7 168 aa5.96□□□□□ -1.46
SYNE2-209ENST00000553308 OR7C2O60412 319 aa5.96□□□□□ -1.46
SYNE2-209ENST00000553308 UBE2L3P68036 154 aaKnown RBP5.96□□□□□ -1.46
SYNE2-209ENST00000553308 ATP6V1FQ16864 119 aa5.96□□□□□ -1.46
SYNE2-209ENST00000553308 CFAP126Q5VTH2 177 aa5.96□□□□□ -1.46
SYNE2-209ENST00000553308 DPPA3Q6W0C5 159 aa5.96□□□□□ -1.46
SYNE2-209ENST00000553308 DAZ4Q86SG3 579 aaKnown RBP5.96□□□□□ -1.46
SYNE2-209ENST00000553308 ATP6V0E2Q8NHE4 81 aa5.96□□□□□ -1.46
SYNE2-209ENST00000553308 CIRBP-AS1Q8TBR5 109 aa5.96□□□□□ -1.46
SYNE2-209ENST00000553308 BAALCQ8WXS3 180 aa5.96□□□□□ -1.46
SYNE2-209ENST00000553308 CHAC1Q9BUX1 264 aa5.96□□□□□ -1.46
SYNE2-209ENST00000553308 GTSF1LQ9H1H1 148 aa5.96□□□□□ -1.46
SYNE2-209ENST00000553308 DAZ3Q9NR90 486 aaKnown RBP5.96□□□□□ -1.46
SYNE2-209ENST00000553308 RPH3ALQ9UNE2 315 aa5.96□□□□□ -1.46
SYNE2-209ENST00000553308 BOLA1Q9Y3E2 137 aa5.96□□□□□ -1.46
SYNE2-209ENST00000553308 DNAH8Q96JB1 4490 aa5.95□□□□□ -1.46
SYNE2-209ENST00000553308 LRP1Q07954 4544 aaKnown RBP5.95□□□□□ -1.46
SYNE2-209ENST00000553308 TRAV6A0A075B6T7 132 aa5.95□□□□□ -1.46
SYNE2-209ENST00000553308 TRAV8-3A0A0A6YYJ7 113 aa5.95□□□□□ -1.46
SYNE2-209ENST00000553308 TRBV6-4A0A1B0GX49 114 aa5.95□□□□□ -1.46
SYNE2-209ENST00000553308 RBFOX3A6NFN3 312 aa5.95□□□□□ -1.46
SYNE2-209ENST00000553308 RS1O15537 224 aa5.95□□□□□ -1.46
SYNE2-209ENST00000553308 NHLH2Q02577 135 aa5.95□□□□□ -1.46
SYNE2-209ENST00000553308 IL15RAQ13261 267 aa5.95□□□□□ -1.46
SYNE2-209ENST00000553308 ZNF876PQ49A33 203 aa5.95□□□□□ -1.46
SYNE2-209ENST00000553308 TMED6Q8WW62 240 aa5.95□□□□□ -1.46
SYNE2-209ENST00000553308 TVP23CQ96ET8 276 aa5.95□□□□□ -1.46
SYNE2-209ENST00000553308 HYLS1Q96M11 299 aa5.95□□□□□ -1.46
SYNE2-209ENST00000553308 SDF2L1Q9HCN8 221 aa5.95□□□□□ -1.46
SYNE2-209ENST00000553308 TRAV8-1A0A0A6YYK1 113 aa5.94□□□□□ -1.46
SYNE2-209ENST00000553308 TRAV21A0A0B4J279 112 aa5.94□□□□□ -1.46
SYNE2-209ENST00000553308 CCDC160A6NGH7 325 aa5.94□□□□□ -1.46
SYNE2-209ENST00000553308 EIF3GO75821 320 aaKnown RBP eCLIP5.94□□□□□ -1.46
SYNE2-209ENST00000553308 IL7P13232 177 aa5.94□□□□□ -1.46
SYNE2-209ENST00000553308 HNRNPA3P51991 378 aaKnown RBP5.94□□□□□ -1.46
SYNE2-209ENST00000553308 CNPY1Q3B7I2 92 aa5.94□□□□□ -1.46
SYNE2-209ENST00000553308 OR5C1Q8NGR4 320 aa5.94□□□□□ -1.46
SYNE2-209ENST00000553308 DNAJC30Q96LL9 226 aa5.94□□□□□ -1.46
SYNE2-209ENST00000553308 ATP5SQ99766 215 aa5.94□□□□□ -1.46
SYNE2-209ENST00000553308 PLA2G10O15496 165 aa5.93□□□□□ -1.46
SYNE2-209ENST00000553308 IGLV2-8P01709 118 aa5.93□□□□□ -1.46
SYNE2-209ENST00000553308 TCRBP04435 133 aa5.93□□□□□ -1.46
SYNE2-209ENST00000553308 LINC00694P0DN24 101 aa5.93□□□□□ -1.46
SYNE2-209ENST00000553308 ASAH1Q13510 395 aa5.93□□□□□ -1.46
SYNE2-209ENST00000553308 ZNF506Q5JVG8 444 aa5.93□□□□□ -1.46
SYNE2-209ENST00000553308 GOLT1AQ6ZVE7 132 aa5.93□□□□□ -1.46
SYNE2-209ENST00000553308 ASB13Q8WXK3 278 aa5.93□□□□□ -1.46
SYNE2-209ENST00000553308 WDR61Q9GZS3 305 aaKnown RBP5.93□□□□□ -1.46
SYNE2-209ENST00000553308 TREM1Q9NP99 234 aa5.93□□□□□ -1.46
SYNE2-209ENST00000553308 KCNIP2Q9NS61 270 aa5.93□□□□□ -1.46
SYNE2-209ENST00000553308 NUDT15Q9NV35 164 aa5.93□□□□□ -1.46
SYNE2-209ENST00000553308 RNF222A6NCQ9 220 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 PGPA6NDG6 321 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 GAGE12JA6NER3 117 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 PGPEP1LA6NFU8 196 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 GGTLC3B5MD39 225 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 LYRM1O43325 122 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 CIDEAO60543 219 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 MGST1P10620 155 aaKnown RBP5.92□□□□□ -1.46
SYNE2-209ENST00000553308 GNG5P63218 68 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 GAGE1Q13065 139 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 GAGE4Q13068 117 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 GAGE5Q13069 117 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 GAGE13Q4V321 117 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 KHDC3LQ587J8 217 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 TOR2AQ5JU69 321 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 Q8N976 141 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 TMEM75Q8N9X5 138 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 CMTM2Q8TAZ6 248 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 KCNS1Q96KK3 526 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 C9orf85Q96MD7 179 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 RBM38Q9H0Z9 239 aaKnown RBP5.92□□□□□ -1.46
SYNE2-209ENST00000553308 OTORQ9NRC9 128 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 C11orf21Q9P2W6 132 aa5.92□□□□□ -1.46
SYNE2-209ENST00000553308 IGKV2D-24A0A075B6R9 120 aa5.91□□□□□ -1.46
SYNE2-209ENST00000553308 ZNF80P51504 273 aaPredicted RBP5.91□□□□□ -1.46
SYNE2-209ENST00000553308 RPL37AP61513 92 aaKnown RBP5.91□□□□□ -1.46
SYNE2-209ENST00000553308 ACOT6Q3I5F7 207 aaPredicted RBP5.91□□□□□ -1.46
SYNE2-209ENST00000553308 FFAR4Q5NUL3 377 aa5.91□□□□□ -1.46
SYNE2-209ENST00000553308 DAZAP1Q96EP5 407 aaKnown RBP5.91□□□□□ -1.46
SYNE2-209ENST00000553308 SGK494Q96LW2 274 aa5.91□□□□□ -1.46
SYNE2-209ENST00000553308 NMES1Q9C002 83 aa5.91□□□□□ -1.46
SYNE2-209ENST00000553308 OR5AC2Q9NZP5 309 aa5.91□□□□□ -1.46
SYNE2-209ENST00000553308 Q9UF83 564 aa5.91□□□□□ -1.46
SYNE2-209ENST00000553308 COX11Q9Y6N1 276 aa5.91□□□□□ -1.46
SYNE2-209ENST00000553308 C17orf112F2Z3M2 114 aa5.9□□□□□ -1.46
SYNE2-209ENST00000553308 IGLV2-11P01706 119 aa5.9□□□□□ -1.46
SYNE2-209ENST00000553308 MT1HL1P0DM35 61 aa5.9□□□□□ -1.46
SYNE2-209ENST00000553308 RNASE3P12724 160 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms