RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 BAALCQ8WXS3 180 aa2.29□□□□□ -2.04
ATXN3-217ENST00000553287 UFD1Q92890 307 aa2.29□□□□□ -2.04
ATXN3-217ENST00000553287 PPP1R14BQ96C90 147 aa2.29□□□□□ -2.04
ATXN3-217ENST00000553287 LINC00467Q9BRT7 94 aa2.29□□□□□ -2.04
ATXN3-217ENST00000553287 C9orf16Q9BUW7 83 aa2.29□□□□□ -2.04
ATXN3-217ENST00000553287 CHAC1Q9BUX1 264 aa2.29□□□□□ -2.04
ATXN3-217ENST00000553287 MND1Q9BWT6 205 aa2.29□□□□□ -2.04
ATXN3-217ENST00000553287 MED4Q9NPJ6 270 aa2.29□□□□□ -2.04
ATXN3-217ENST00000553287 RPRMQ9NS64 109 aa2.29□□□□□ -2.04
ATXN3-217ENST00000553287 MRPL16Q9NX20 251 aaKnown RBP2.29□□□□□ -2.04
ATXN3-217ENST00000553287 KLF12Q9Y4X4 402 aa2.29□□□□□ -2.04
ATXN3-217ENST00000553287 ICOSQ9Y6W8 199 aa2.29□□□□□ -2.04
ATXN3-217ENST00000553287 IGKV1D-37A0A075B6S9 117 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 TRAV12-3A0A0B4J271 114 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 LINC00854A0A1B0GVQ3 168 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 C7orf66A4D0T2 115 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 K7EQM0 130 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 GPR31O00270 319 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 ISLRO14498 428 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 ARL6IP5O75915 188 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 IGKV4-1P06312 121 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 OR5AC1P0C628 307 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 SFTA3P0C7M3 94 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 RAB3BP20337 219 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 EVI2AP22794 236 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 HLA-DMAP28067 261 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 HSPA13P48723 471 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 TAS2R20P59543 309 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 YPEL3P61236 119 aaPredicted RBP2.28□□□□□ -2.04
ATXN3-217ENST00000553287 CACNG7P62955 275 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 SSX1Q16384 188 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 C22orf42Q6IC83 251 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 C10orf67Q8IYJ2 551 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 OR8I2Q8N0Y5 310 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 TMEM263Q8WUH6 116 aaKnown RBP2.28□□□□□ -2.04
ATXN3-217ENST00000553287 TP53RKQ96S44 253 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 TSC22D3Q99576 134 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 FKBP14Q9NWM8 211 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 RPH3ALQ9UNE2 315 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 FUT9Q9Y231 359 aa2.28□□□□□ -2.04
ATXN3-217ENST00000553287 TRAV30A0A087WSZ9 112 aa2.27□□□□□ -2.05
ATXN3-217ENST00000553287 RBFOX3A6NFN3 312 aa2.27□□□□□ -2.05
ATXN3-217ENST00000553287 H3BNG1 76 aa2.27□□□□□ -2.05
ATXN3-217ENST00000553287 CIB2O75838 187 aa2.27□□□□□ -2.05
ATXN3-217ENST00000553287 ORM2P19652 201 aa2.27□□□□□ -2.05
ATXN3-217ENST00000553287 AKR1C2P52895 323 aa2.27□□□□□ -2.05
ATXN3-217ENST00000553287 CRYBA4P53673 196 aa2.27□□□□□ -2.05
ATXN3-217ENST00000553287 SUB1P53999 127 aaKnown RBP eCLIP2.27□□□□□ -2.05
ATXN3-217ENST00000553287 SUPT4H1P63272 117 aaKnown RBP2.27□□□□□ -2.05
ATXN3-217ENST00000553287 MXD1Q05195 221 aa2.27□□□□□ -2.05
ATXN3-217ENST00000553287 MSMO1Q15800 293 aa2.27□□□□□ -2.05
ATXN3-217ENST00000553287 PSG3Q16557 428 aa2.27□□□□□ -2.05
ATXN3-217ENST00000553287 BSXQ3C1V8 233 aa2.27□□□□□ -2.05
ATXN3-217ENST00000553287 SPATA31B1PQ5VZV4 182 aa2.27□□□□□ -2.05
ATXN3-217ENST00000553287 OR8A1Q8NGG7 326 aa2.27□□□□□ -2.05
ATXN3-217ENST00000553287 CCDC90BQ9GZT6 254 aa2.27□□□□□ -2.05
ATXN3-217ENST00000553287 VCX2Q9H322 139 aa2.27□□□□□ -2.05
ATXN3-217ENST00000553287 AUNIPQ9H7T9 357 aa2.27□□□□□ -2.05
ATXN3-217ENST00000553287 ENY2Q9NPA8 101 aa2.27□□□□□ -2.05
ATXN3-217ENST00000553287 IFT46Q9NQC8 304 aa2.27□□□□□ -2.05
ATXN3-217ENST00000553287 RHBDL2Q9NX52 303 aa2.27□□□□□ -2.05
ATXN3-217ENST00000553287 IGKV1OR2-108A0A075B7D4 117 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 A0A1B0GVX0 72 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 CEBPZOSA8MTT3 80 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 IBA57-AS1B1ANH7 110 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 H7BYZ3 331 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 CORTO00230 105 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 PDCD5O14737 125 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 GSTZ1O43708 216 aaPredicted RBP2.26□□□□□ -2.05
ATXN3-217ENST00000553287 ADAP1O75689 374 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 ATP5LO75964 103 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 C1QBP02746 253 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 MYL9P24844 172 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 HRH1P35367 487 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 HTR2BP41595 481 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 CBX5P45973 191 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 CDKN1BP46527 198 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 RPL5P46777 297 aaKnown RBP2.26□□□□□ -2.05
ATXN3-217ENST00000553287 SFXN4Q6P4A7 337 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 C8orf59Q8N0T1 100 aaPredicted RBP2.26□□□□□ -2.05
ATXN3-217ENST00000553287 TMEM256Q8N2U0 113 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 C11orf72Q8NBR9 251 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 LHFPL5Q8TAF8 219 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 BLNKQ8WV28 456 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 MGLLQ99685 303 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 PDCD10Q9BUL8 212 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 HHLA3Q9XRX5 114 aa2.26□□□□□ -2.05
ATXN3-217ENST00000553287 TRAV1-2A0A0B4J238 106 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 TRGV4A0A0C4DH28 118 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 INS-IGF2F8WCM5 200 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 SPINK4O60575 86 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 SLC25A4P12235 298 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 CXCL3P19876 107 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 SRIP30626 198 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 TGFBR1P36897 503 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 GALR1P47211 349 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 B2MP61769 119 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 MLLT11Q13015 90 aaPredicted RBP2.25□□□□□ -2.05
ATXN3-217ENST00000553287 ERCC8Q13216 396 aa2.25□□□□□ -2.05
ATXN3-217ENST00000553287 BTN1A1Q13410 526 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms