RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 EPDR1Q9UM22 224 aa10.98□□□□□ -0.65
CDK4-215ENST00000553237 MUC4Q99102 2169 aa10.97□□□□□ -0.65
CDK4-215ENST00000553237 A0A1W2PRE2 83 aa10.97□□□□□ -0.65
CDK4-215ENST00000553237 TCRAP04437 139 aa10.97□□□□□ -0.65
CDK4-215ENST00000553237 UBE2G2P60604 165 aa10.97□□□□□ -0.65
CDK4-215ENST00000553237 EIF5AP63241 154 aaKnown RBP10.97□□□□□ -0.65
CDK4-215ENST00000553237 Q6AWC8 147 aa10.97□□□□□ -0.65
CDK4-215ENST00000553237 FAM159AQ6UWV7 190 aa10.97□□□□□ -0.65
CDK4-215ENST00000553237 TVP23CQ96ET8 276 aa10.97□□□□□ -0.65
CDK4-215ENST00000553237 KRTAP1-5Q9BYS1 174 aa10.97□□□□□ -0.65
CDK4-215ENST00000553237 MRPS16Q9Y3D3 137 aaKnown RBP10.97□□□□□ -0.65
CDK4-215ENST00000553237 DNAH11Q96DT5 4516 aa10.96□□□□□ -0.65
CDK4-215ENST00000553237 SERTM2A0A1B0GWG4 89 aa10.96□□□□□ -0.65
CDK4-215ENST00000553237 MED14OSP0DP75 135 aa10.96□□□□□ -0.65
CDK4-215ENST00000553237 C8orf49Q96NF6 230 aa10.96□□□□□ -0.65
CDK4-215ENST00000553237 UPK3BQ9BT76 320 aa10.96□□□□□ -0.65
CDK4-215ENST00000553237 TREM1Q9NP99 234 aa10.96□□□□□ -0.65
CDK4-215ENST00000553237 UMAD1C9J7I0 102 aa10.95□□□□□ -0.66
CDK4-215ENST00000553237 F6UZH7 168 aa10.95□□□□□ -0.66
CDK4-215ENST00000553237 K7EQM0 130 aa10.95□□□□□ -0.66
CDK4-215ENST00000553237 GNRH2O43555 120 aa10.95□□□□□ -0.66
CDK4-215ENST00000553237 IFNA7P01567 189 aa10.95□□□□□ -0.66
CDK4-215ENST00000553237 SFTA3P0C7M3 94 aa10.95□□□□□ -0.66
CDK4-215ENST00000553237 TPT1P13693 172 aaKnown RBP10.95□□□□□ -0.66
CDK4-215ENST00000553237 FHL2Q14192 279 aa10.95□□□□□ -0.66
CDK4-215ENST00000553237 LGALSLQ3ZCW2 172 aaPredicted RBP10.95□□□□□ -0.66
CDK4-215ENST00000553237 STOML3Q8TAV4 291 aa10.95□□□□□ -0.66
CDK4-215ENST00000553237 FAM213BQ8TBF2 198 aa10.95□□□□□ -0.66
CDK4-215ENST00000553237 PRO0255Q9UI72 69 aa10.95□□□□□ -0.66
CDK4-215ENST00000553237 HHLA3Q9XRX5 114 aa10.95□□□□□ -0.66
CDK4-215ENST00000553237 ICOSQ9Y6W8 199 aa10.95□□□□□ -0.66
CDK4-215ENST00000553237 DYNC1H1Q14204 4646 aaKnown RBP10.95□□□□□ -0.66
CDK4-215ENST00000553237 TRGV11A0A075B6L2 103 aa10.94□□□□□ -0.66
CDK4-215ENST00000553237 TRGV4A0A0C4DH28 118 aa10.94□□□□□ -0.66
CDK4-215ENST00000553237 FAM74A7A6NL05 159 aa10.94□□□□□ -0.66
CDK4-215ENST00000553237 C1QBP02746 253 aa10.94□□□□□ -0.66
CDK4-215ENST00000553237 CRYBA4P53673 196 aa10.94□□□□□ -0.66
CDK4-215ENST00000553237 TTC32Q5I0X7 151 aa10.94□□□□□ -0.66
CDK4-215ENST00000553237 AKAP14Q86UN6 197 aa10.94□□□□□ -0.66
CDK4-215ENST00000553237 CYB561D1Q8N8Q1 229 aa10.94□□□□□ -0.66
CDK4-215ENST00000553237 SFT2D1Q8WV19 159 aa10.94□□□□□ -0.66
CDK4-215ENST00000553237 PSG8Q9UQ74 426 aa10.94□□□□□ -0.66
CDK4-215ENST00000553237 TRAV21A0A0B4J279 112 aa10.93□□□□□ -0.66
CDK4-215ENST00000553237 IGLV2-11P01706 119 aa10.93□□□□□ -0.66
CDK4-215ENST00000553237 SLAQ13239 276 aa10.93□□□□□ -0.66
CDK4-215ENST00000553237 MBD3L1Q8WWY6 194 aa10.93□□□□□ -0.66
CDK4-215ENST00000553237 ZNF479Q96JC4 524 aa10.93□□□□□ -0.66
CDK4-215ENST00000553237 LINC00479Q96M42 142 aa10.93□□□□□ -0.66
CDK4-215ENST00000553237 SPXQ9BT56 116 aa10.93□□□□□ -0.66
CDK4-215ENST00000553237 NDFIP1Q9BT67 221 aa10.93□□□□□ -0.66
CDK4-215ENST00000553237 A0A1B0GV50 99 aa10.92□□□□□ -0.66
CDK4-215ENST00000553237 FLI1Q01543 452 aaPredicted RBP10.92□□□□□ -0.66
CDK4-215ENST00000553237 PRNTQ86SH4 94 aa10.92□□□□□ -0.66
CDK4-215ENST00000553237 TMEM75Q8N9X5 138 aa10.92□□□□□ -0.66
CDK4-215ENST00000553237 RASL10AQ92737 203 aa10.92□□□□□ -0.66
CDK4-215ENST00000553237 NKX6-2Q9C056 277 aaPredicted RBP10.92□□□□□ -0.66
CDK4-215ENST00000553237 TRAV34A0A0B4J273 112 aa10.91□□□□□ -0.66
CDK4-215ENST00000553237 IGHV3-16A0A0C4DH30 117 aa10.91□□□□□ -0.66
CDK4-215ENST00000553237 C16orf90A8MZG2 172 aa10.91□□□□□ -0.66
CDK4-215ENST00000553237 MRPL23Q16540 153 aaKnown RBP10.91□□□□□ -0.66
CDK4-215ENST00000553237 TDRG1Q3Y452 100 aa10.91□□□□□ -0.66
CDK4-215ENST00000553237 CST9LP1Q5W188 147 aa10.91□□□□□ -0.66
CDK4-215ENST00000553237 DPPA3Q6W0C5 159 aa10.91□□□□□ -0.66
CDK4-215ENST00000553237 A0A1W2PPQ1 181 aa10.9□□□□□ -0.66
CDK4-215ENST00000553237 FBLL1A6NHQ2 334 aaKnown RBP10.9□□□□□ -0.66
CDK4-215ENST00000553237 PEX7O00628 323 aa10.9□□□□□ -0.66
CDK4-215ENST00000553237 NXPH4O95158 308 aa10.9□□□□□ -0.66
CDK4-215ENST00000553237 TYMSP04818 313 aa10.9□□□□□ -0.66
CDK4-215ENST00000553237 H2AFB1P0C5Y9 115 aa10.9□□□□□ -0.66
CDK4-215ENST00000553237 LYPD5Q6UWN5 251 aa10.9□□□□□ -0.66
CDK4-215ENST00000553237 HIST1H2BAQ96A08 127 aa10.9□□□□□ -0.66
CDK4-215ENST00000553237 SDF2L1Q9HCN8 221 aa10.9□□□□□ -0.66
CDK4-215ENST00000553237 A0A1B0GVG6 124 aa10.89□□□□□ -0.67
CDK4-215ENST00000553237 M0R2P5 195 aa10.89□□□□□ -0.67
CDK4-215ENST00000553237 SIVA1O15304 175 aa10.89□□□□□ -0.67
CDK4-215ENST00000553237 PAGE4O60829 102 aa10.89□□□□□ -0.67
CDK4-215ENST00000553237 PPT1P50897 306 aa10.89□□□□□ -0.67
CDK4-215ENST00000553237 ZNF80P51504 273 aaPredicted RBP10.89□□□□□ -0.67
CDK4-215ENST00000553237 SAPCD1Q5SSQ6 148 aa10.89□□□□□ -0.67
CDK4-215ENST00000553237 EIF5AL1Q6IS14 154 aaKnown RBP10.89□□□□□ -0.67
CDK4-215ENST00000553237 NEGR1Q7Z3B1 354 aa10.89□□□□□ -0.67
CDK4-215ENST00000553237 GCGP01275 180 aa10.88□□□□□ -0.67
CDK4-215ENST00000553237 GYPEP15421 78 aa10.88□□□□□ -0.67
CDK4-215ENST00000553237 ZFP69Q49AA0 526 aa10.88□□□□□ -0.67
CDK4-215ENST00000553237 SMUG1Q53HV7 270 aa10.88□□□□□ -0.67
CDK4-215ENST00000553237 SLC51BQ86UW2 128 aa10.88□□□□□ -0.67
CDK4-215ENST00000553237 OR4C5Q8NGB2 326 aa10.88□□□□□ -0.67
CDK4-215ENST00000553237 ARL2-SNX15V9GYD0 113 aa10.88□□□□□ -0.67
CDK4-215ENST00000553237 TRAV4A0A0B4J268 109 aa10.87□□□□□ -0.67
CDK4-215ENST00000553237 K7EQD1 137 aa10.87□□□□□ -0.67
CDK4-215ENST00000553237 SRIP30626 198 aa10.87□□□□□ -0.67
CDK4-215ENST00000553237 RAB5CP51148 216 aa10.87□□□□□ -0.67
CDK4-215ENST00000553237 LINC00315P59091 139 aa10.87□□□□□ -0.67
CDK4-215ENST00000553237 SPATA12Q7Z6I5 190 aa10.87□□□□□ -0.67
CDK4-215ENST00000553237 C9orf62Q8N4C0 152 aa10.87□□□□□ -0.67
CDK4-215ENST00000553237 PCNPQ8WW12 178 aaKnown RBP10.87□□□□□ -0.67
CDK4-215ENST00000553237 KCNS1Q96KK3 526 aa10.87□□□□□ -0.67
CDK4-215ENST00000553237 C11orf21Q9P2W6 132 aa10.87□□□□□ -0.67
CDK4-215ENST00000553237 C9JCJ5 164 aa10.86□□□□□ -0.67
CDK4-215ENST00000553237 PFN1P07737 140 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms