RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 CDPF1Q6NVV7 123 aa7.75□□□□□ -1.17
NEK3-204ENST00000552973 GOLT1AQ6ZVE7 132 aa7.75□□□□□ -1.17
NEK3-204ENST00000552973 NHLRC2Q8NBF2 726 aa7.75□□□□□ -1.17
NEK3-204ENST00000552973 TVP23CQ96ET8 276 aa7.75□□□□□ -1.17
NEK3-204ENST00000552973 TXNDC17Q9BRA2 123 aa7.75□□□□□ -1.17
NEK3-204ENST00000552973 WFDC1Q9HC57 220 aa7.75□□□□□ -1.17
NEK3-204ENST00000552973 OTORQ9NRC9 128 aa7.75□□□□□ -1.17
NEK3-204ENST00000552973 LENEPQ9Y5L5 61 aa7.75□□□□□ -1.17
NEK3-204ENST00000552973 C9JCJ5 164 aa7.74□□□□□ -1.17
NEK3-204ENST00000552973 M0R2P5 195 aa7.74□□□□□ -1.17
NEK3-204ENST00000552973 SSNA1O43805 119 aa7.74□□□□□ -1.17
NEK3-204ENST00000552973 TYMSP04818 313 aa7.74□□□□□ -1.17
NEK3-204ENST00000552973 RPL12P30050 165 aaKnown RBP7.74□□□□□ -1.17
NEK3-204ENST00000552973 Q5VSD8 79 aa7.74□□□□□ -1.17
NEK3-204ENST00000552973 FAT1Q14517 4588 aa7.74□□□□□ -1.17
NEK3-204ENST00000552973 TRAV21A0A0B4J279 112 aa7.73□□□□□ -1.17
NEK3-204ENST00000552973 A0A1W2PPV4 95 aa7.73□□□□□ -1.17
NEK3-204ENST00000552973 GCSHP23434 173 aa7.73□□□□□ -1.17
NEK3-204ENST00000552973 PPT1P50897 306 aa7.73□□□□□ -1.17
NEK3-204ENST00000552973 RAB2AP61019 212 aa7.73□□□□□ -1.17
NEK3-204ENST00000552973 TDRG1Q3Y452 100 aa7.73□□□□□ -1.17
NEK3-204ENST00000552973 FAM74A1Q5RGS3 127 aa7.73□□□□□ -1.17
NEK3-204ENST00000552973 LINC00299Q6ZSB3 139 aa7.73□□□□□ -1.17
NEK3-204ENST00000552973 TMED6Q8WW62 240 aa7.73□□□□□ -1.17
NEK3-204ENST00000552973 TREM1Q9NP99 234 aa7.73□□□□□ -1.17
NEK3-204ENST00000552973 IGHV3-73A0A0B4J1V6 119 aa7.72□□□□□ -1.17
NEK3-204ENST00000552973 ACOT6Q3I5F7 207 aaPredicted RBP7.72□□□□□ -1.17
NEK3-204ENST00000552973 FRZBQ92765 325 aa7.72□□□□□ -1.17
NEK3-204ENST00000552973 SDF2L1Q9HCN8 221 aa7.72□□□□□ -1.17
NEK3-204ENST00000552973 IGHV3-38A0A0C4DH36 116 aa7.71□□□□□ -1.18
NEK3-204ENST00000552973 PSCAO43653 123 aa7.71□□□□□ -1.18
NEK3-204ENST00000552973 IGHV3-30P01768 117 aa7.71□□□□□ -1.18
NEK3-204ENST00000552973 IGHV3-33P01772 117 aa7.71□□□□□ -1.18
NEK3-204ENST00000552973 IGHV3-30-3P0DP02 117 aa7.71□□□□□ -1.18
NEK3-204ENST00000552973 IGHV3-30-5P0DP03 117 aa7.71□□□□□ -1.18
NEK3-204ENST00000552973 GATA1P15976 413 aaPredicted RBP7.71□□□□□ -1.18
NEK3-204ENST00000552973 DPPA3Q6W0C5 159 aa7.71□□□□□ -1.18
NEK3-204ENST00000552973 C10orf126Q8N4M7 172 aa7.71□□□□□ -1.18
NEK3-204ENST00000552973 SLC25A29Q8N8R3 303 aa7.71□□□□□ -1.18
NEK3-204ENST00000552973 OR10G9Q8NGN4 311 aa7.71□□□□□ -1.18
NEK3-204ENST00000552973 OR10G7Q8NGN6 311 aa7.71□□□□□ -1.18
NEK3-204ENST00000552973 MARVELD1Q9BSK0 173 aa7.71□□□□□ -1.18
NEK3-204ENST00000552973 Q9HAA7 133 aa7.71□□□□□ -1.18
NEK3-204ENST00000552973 IGLV5-52A0A0A0MRZ9 124 aa7.7□□□□□ -1.18
NEK3-204ENST00000552973 FBLL1A6NHQ2 334 aaKnown RBP7.7□□□□□ -1.18
NEK3-204ENST00000552973 K7EP13 123 aa7.7□□□□□ -1.18
NEK3-204ENST00000552973 PET100P0DJ07 73 aa7.7□□□□□ -1.18
NEK3-204ENST00000552973 ZNF80P51504 273 aaPredicted RBP7.7□□□□□ -1.18
NEK3-204ENST00000552973 ZNF876PQ49A33 203 aa7.7□□□□□ -1.18
NEK3-204ENST00000552973 OR10J3Q5JRS4 329 aa7.7□□□□□ -1.18
NEK3-204ENST00000552973 PQLC2Q6ZP29 291 aa7.7□□□□□ -1.18
NEK3-204ENST00000552973 TMEM75Q8N9X5 138 aa7.7□□□□□ -1.18
NEK3-204ENST00000552973 ASB13Q8WXK3 278 aa7.7□□□□□ -1.18
NEK3-204ENST00000552973 KCNS1Q96KK3 526 aa7.7□□□□□ -1.18
NEK3-204ENST00000552973 C11orf21Q9P2W6 132 aa7.7□□□□□ -1.18
NEK3-204ENST00000552973 TRAV8-6A0A0B4J262 113 aa7.69□□□□□ -1.18
NEK3-204ENST00000552973 LRCOL1A6NCL2 159 aa7.69□□□□□ -1.18
NEK3-204ENST00000552973 RS1O15537 224 aa7.69□□□□□ -1.18
NEK3-204ENST00000552973 CFAP126Q5VTH2 177 aa7.69□□□□□ -1.18
NEK3-204ENST00000552973 SH2D6Q7Z4S9 175 aa7.69□□□□□ -1.18
NEK3-204ENST00000552973 IBA57-AS1B1ANH7 110 aa7.68□□□□□ -1.18
NEK3-204ENST00000552973 GCGP01275 180 aa7.68□□□□□ -1.18
NEK3-204ENST00000552973 TCRAP04437 139 aa7.68□□□□□ -1.18
NEK3-204ENST00000552973 PFN1P07737 140 aaKnown RBP7.68□□□□□ -1.18
NEK3-204ENST00000552973 ARL14EPLP0DKL9 152 aa7.68□□□□□ -1.18
NEK3-204ENST00000552973 CDC34P49427 236 aaPredicted RBP7.68□□□□□ -1.18
NEK3-204ENST00000552973 TIRAPP58753 221 aa7.68□□□□□ -1.18
NEK3-204ENST00000552973 LINC01556Q5JQF7 62 aa7.68□□□□□ -1.18
NEK3-204ENST00000552973 ARL6IP6Q8N6S5 226 aa7.68□□□□□ -1.18
NEK3-204ENST00000552973 PRADC1Q9BSG0 188 aa7.68□□□□□ -1.18
NEK3-204ENST00000552973 NDFIP1Q9BT67 221 aa7.68□□□□□ -1.18
NEK3-204ENST00000552973 PSG8Q9UQ74 426 aa7.68□□□□□ -1.18
NEK3-204ENST00000552973 PGPEP1LA6NFU8 196 aa7.67□□□□□ -1.18
NEK3-204ENST00000552973 TAAR5O14804 337 aa7.67□□□□□ -1.18
NEK3-204ENST00000552973 SUMO1P63165 101 aaKnown RBP7.67□□□□□ -1.18
NEK3-204ENST00000552973 RHOHQ15669 191 aa7.67□□□□□ -1.18
NEK3-204ENST00000552973 LINC01559Q495D7 138 aa7.67□□□□□ -1.18
NEK3-204ENST00000552973 PRNTQ86SH4 94 aa7.67□□□□□ -1.18
NEK3-204ENST00000552973 Q8N814 137 aa7.67□□□□□ -1.18
NEK3-204ENST00000552973 HSD17B11Q8NBQ5 300 aa7.67□□□□□ -1.18
NEK3-204ENST00000552973 RAB24Q969Q5 203 aa7.67□□□□□ -1.18
NEK3-204ENST00000552973 HERC1Q15751 4861 aa7.66□□□□□ -1.18
NEK3-204ENST00000552973 TRBV6-4A0A1B0GX49 114 aa7.66□□□□□ -1.18
NEK3-204ENST00000552973 FAM229AH3BQW9 127 aa7.66□□□□□ -1.18
NEK3-204ENST00000552973 STAG3L2P0CL84 134 aa7.66□□□□□ -1.18
NEK3-204ENST00000552973 STAG3L3P0CL85 134 aa7.66□□□□□ -1.18
NEK3-204ENST00000552973 GCHFRP30047 84 aa7.66□□□□□ -1.18
NEK3-204ENST00000552973 DEFA1P59665 94 aa7.66□□□□□ -1.18
NEK3-204ENST00000552973 DEFA3P59666 94 aa7.66□□□□□ -1.18
NEK3-204ENST00000552973 ZNF506Q5JVG8 444 aa7.66□□□□□ -1.18
NEK3-204ENST00000552973 Q8N3U1 123 aa7.66□□□□□ -1.18
NEK3-204ENST00000552973 C5orf17Q8NAS9 161 aa7.66□□□□□ -1.18
NEK3-204ENST00000552973 ATP6V0E2Q8NHE4 81 aa7.66□□□□□ -1.18
NEK3-204ENST00000552973 C9orf85Q96MD7 179 aa7.66□□□□□ -1.18
NEK3-204ENST00000552973 FAM30AQ9NZY2 134 aa7.66□□□□□ -1.18
NEK3-204ENST00000552973 GAGE12JA6NER3 117 aa7.65□□□□□ -1.18
NEK3-204ENST00000552973 A6NHS1 94 aa7.65□□□□□ -1.18
NEK3-204ENST00000552973 IGLV2-11P01706 119 aa7.65□□□□□ -1.18
NEK3-204ENST00000552973 RNASE3P12724 160 aaKnown RBP7.65□□□□□ -1.18
NEK3-204ENST00000552973 ATP6V0CP27449 155 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms